Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_E12_e573_10.seq
(1544 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 52 1e-08
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 9.3
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 9.3
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 9.3
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 9.3
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 9.3
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 9.3
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 9.3
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 52.0 bits (119), Expect = 1e-08
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Frame = +1
Query: 247 LEILSLNNAGLTNLKGFPALP--KLRKLELSDNRISN-GLNFLSGCKKLTHLNLSGNKIK 417
L+IL L N + ++ LP L LELSDN++ G +G L L LSGN I
Sbjct: 361 LQILDLRNNSIDRIESNAFLPLYNLHTLELSDNKLRTVGAQLFNGLFVLNRLTLSGNAIA 420
Query: 418 ALEELKPLKEFENLKNLDLFNNEVTIIED 504
+++ L + +LK LDL NE+T + D
Sbjct: 421 SIDPLA-FRNCSDLKELDLSGNELTSVPD 448
Score = 37.9 bits (84), Expect = 2e-04
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Frame = +1
Query: 241 TNLEILSLNNAGLTNLK-GFPALPKLRKLELSDNRISNGLN-FLSGCKKLTHLNLSGNKI 414
++L+ L L+ LT++ L L+ L+L +NRISN N +LT L L GN I
Sbjct: 431 SDLKELDLSGNELTSVPDALRDLALLKTLDLGENRISNFYNGSFRNLDQLTGLRLIGNDI 490
Query: 415 KALEELKPLKEFENLKNLDLFNNEVTIIEDY 507
L L + NL+ L+L N+V +E Y
Sbjct: 491 GNLSR-GMLWDLPNLQILNLARNKVQHVERY 520
Score = 33.1 bits (72), Expect = 0.007
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Frame = +1
Query: 244 NLEILSLNNAGLTNLKG--FPALPKLRKLELSDNRIS--NGLNFLSGCKKLTHLNLSGNK 411
NL+IL L + + LKG F L LR+L L +N I L FL + L L LSGN+
Sbjct: 843 NLQILHLEDNRIRELKGFEFERLSHLRELYLQNNLIGFIGNLTFLP-LRSLEILRLSGNR 901
Query: 412 I 414
+
Sbjct: 902 L 902
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 9.3
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Frame = +1
Query: 133 EKRLVLELRGRNPSQVKELNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFPALPK 312
EK+L + R+P N N T I LS++ + + SL G + + +
Sbjct: 70 EKKLSKRSKSRSPESRGRSNASNTSKTFI--LSEKLESSDGTSLFR-GPEGTQ--VSATE 124
Query: 313 LRKLELSDNRISNGLNFLSGCK-KLTHLNLSGNKIKAL--EELKPLKEFENLKNLDLFNN 483
LRK+++ +R+ G + + K +N +K E KP+ E E +KN+ N
Sbjct: 125 LRKIKVDIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTN 184
Query: 484 EVT 492
E+T
Sbjct: 185 EIT 187
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 9.3
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Frame = +1
Query: 133 EKRLVLELRGRNPSQVKELNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFPALPK 312
EK+L + R+P N N T I LS++ + + SL G + + +
Sbjct: 70 EKKLSKRSKSRSPESRGRSNASNTSKTFI--LSEKLESSDGTSLFR-GPEGTQ--VSATE 124
Query: 313 LRKLELSDNRISNGLNFLSGCK-KLTHLNLSGNKIKAL--EELKPLKEFENLKNLDLFNN 483
LRK+++ +R+ G + + K +N +K E KP+ E E +KN+ N
Sbjct: 125 LRKIKVDIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTN 184
Query: 484 EVT 492
E+T
Sbjct: 185 EIT 187
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 9.3
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Frame = +1
Query: 133 EKRLVLELRGRNPSQVKELNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFPALPK 312
EK+L + R+P N N T I LS++ + + SL G + + +
Sbjct: 70 EKKLSKRSKSRSPESRGRSNASNTSKTFI--LSEKLESSDGTSLFR-GPEGTQ--VSATE 124
Query: 313 LRKLELSDNRISNGLNFLSGCK-KLTHLNLSGNKIKAL--EELKPLKEFENLKNLDLFNN 483
LRK+++ +R+ G + + K +N +K E KP+ E E +KN+ N
Sbjct: 125 LRKIKVDIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTN 184
Query: 484 EVT 492
E+T
Sbjct: 185 EIT 187
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 9.3
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Frame = +1
Query: 133 EKRLVLELRGRNPSQVKELNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFPALPK 312
EK+L + R+P N N T I LS++ + + SL G + + +
Sbjct: 70 EKKLSKRSKSRSPESRGRSNASNTSKTFI--LSEKLESSDGTSLFR-GPEGTQ--VSATE 124
Query: 313 LRKLELSDNRISNGLNFLSGCK-KLTHLNLSGNKIKAL--EELKPLKEFENLKNLDLFNN 483
LRK+++ +R+ G + + K +N +K E KP+ E E +KN+ N
Sbjct: 125 LRKIKVDIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTN 184
Query: 484 EVT 492
E+T
Sbjct: 185 EIT 187
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 9.3
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Frame = +1
Query: 133 EKRLVLELRGRNPSQVKELNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFPALPK 312
EK+L + R+P N N T I LS++ + + SL G + + +
Sbjct: 70 EKKLSKRSKSRSPESRGRSNASNTSKTFI--LSEKLESSDGTSLFR-GPEGTQ--VSATE 124
Query: 313 LRKLELSDNRISNGLNFLSGCK-KLTHLNLSGNKIKAL--EELKPLKEFENLKNLDLFNN 483
LRK+++ +R+ G + + K +N +K E KP+ E E +KN+ N
Sbjct: 125 LRKIKVDIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTN 184
Query: 484 EVT 492
E+T
Sbjct: 185 EIT 187
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.6 bits (46), Expect = 9.3
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Frame = +1
Query: 133 EKRLVLELRGRNPSQVKELNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFPALPK 312
EK+L + R+P N N T I LS++ + + SL G + + +
Sbjct: 70 EKKLSKRSKSRSPESRGRSNASNTSKTFI--LSEKLESSDGTSLFR-GPEGTQ--VSATE 124
Query: 313 LRKLELSDNRISNGLNFLSGCK-KLTHLNLSGNKIKAL--EELKPLKEFENLKNLDLFNN 483
LRK+++ +R+ G + + K +N +K E KP+ E E +KN+ N
Sbjct: 125 LRKIKVDIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTN 184
Query: 484 EVT 492
E+T
Sbjct: 185 EIT 187
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 9.3
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Frame = +1
Query: 133 EKRLVLELRGRNPSQVKELNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFPALPK 312
EK+L + R+P N N T I LS++ + + SL G + + +
Sbjct: 70 EKKLSKRSKSRSPESRGRSNASNTSKTFI--LSEKLESSDGTSLFR-GPEGTQ--VSATE 124
Query: 313 LRKLELSDNRISNGLNFLSGCK-KLTHLNLSGNKIKAL--EELKPLKEFENLKNLDLFNN 483
LRK+++ +R+ G + + K +N +K E KP+ E E +KN+ N
Sbjct: 125 LRKIKVDIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTN 184
Query: 484 EVT 492
E+T
Sbjct: 185 EIT 187
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 284,473
Number of Sequences: 438
Number of extensions: 4508
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 54190125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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