Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_E11_e565_09.seq
         (1558 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    26   0.65 
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    26   0.65 
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    25   2.0  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    25   2.0  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    25   2.0  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    25   2.0  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 26.2 bits (55), Expect = 0.65
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = +1

Query: 289 SYGSQPILPSRPNYNVPSYQSKPKPQQTNTKITNLKGQYVFNGKPADSVYVLRNTYNSIY 468
           S+ +QP+LP+ P   + + Q    P   +   TN +G Y  N    +++  L + Y + Y
Sbjct: 290 SWATQPVLPTHPYQMIKNQQVYDVPWIVS--FTNSEGLYAINEIYDNALLALLDDYWNEY 347


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 26.2 bits (55), Expect = 0.65
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = +1

Query: 289 SYGSQPILPSRPNYNVPSYQSKPKPQQTNTKITNLKGQYVFNGKPADSVYVLRNTYNSIY 468
           S+ +QP+LP+ P   + + Q    P   +   TN +G Y  N    +++  L + Y + Y
Sbjct: 290 SWATQPVLPTHPYQMIKNQQVYDVPWIVS--FTNSEGLYAINEIYDNALLALLDDYWNEY 347


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +1

Query: 253 FQQVAQMPVDPFSYGSQPILP-SRPNYNVPSY 345
           + Q A   VDP +  SQP  P  +P  ++P Y
Sbjct: 102 YHQAASAVVDPLNSCSQPAAPGGQPIPDIPRY 133


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +1

Query: 253 FQQVAQMPVDPFSYGSQPILP-SRPNYNVPSY 345
           + Q A   VDP +  SQP  P  +P  ++P Y
Sbjct: 161 YHQAASAVVDPLNSCSQPAAPGGQPIPDIPRY 192


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +1

Query: 253 FQQVAQMPVDPFSYGSQPILP-SRPNYNVPSY 345
           + Q A   VDP +  SQP  P  +P  ++P Y
Sbjct: 102 YHQAASAVVDPLNSCSQPAAPGGQPIPDIPRY 133


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +1

Query: 253 FQQVAQMPVDPFSYGSQPILP-SRPNYNVPSY 345
           + Q A   VDP +  SQP  P  +P  ++P Y
Sbjct: 161 YHQAASAVVDPLNSCSQPAAPGGQPIPDIPRY 192


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 264,134
Number of Sequences: 336
Number of extensions: 5508
Number of successful extensions: 29
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 46910650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)