Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_E11_e565_09.seq
(1558 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0904 + 20717005-20718087 41 0.003
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 38 0.021
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 33 0.81
08_02_1453 - 27199228-27200579,27200712-27202646,27202905-272029... 32 1.4
01_07_0082 - 40965947-40967023 31 1.9
12_02_0318 - 17457182-17462232,17462745-17462955,17463356-174634... 31 3.3
01_06_0995 + 33661367-33661380,33661729-33661826,33662059-336622... 26 3.8
09_01_0079 - 1159963-1160211,1160303-1160509,1160631-1160801,116... 30 4.3
07_03_0471 + 18501496-18502104,18503009-18503260,18503367-185035... 30 5.7
06_03_0138 + 17093196-17093325,17095704-17095804,17096224-170962... 30 5.7
05_03_0180 - 9272700-9272979,9273976-9274145 30 5.7
02_02_0059 - 6432945-6433115,6433975-6434061,6434585-6434787,643... 29 7.5
01_01_0907 + 7128397-7128497,7129944-7130022,7130470-7130568,713... 29 7.5
10_08_0949 - 21759821-21759833,21759985-21760301,21760650-217607... 29 9.9
03_02_0491 + 8854438-8854657,8854897-8854942,8855268-8855307,885... 29 9.9
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 29 9.9
>04_03_0904 + 20717005-20718087
Length = 360
Score = 40.7 bits (91), Expect = 0.003
Identities = 29/96 (30%), Positives = 38/96 (39%), Gaps = 1/96 (1%)
Frame = +1
Query: 103 SQPPTIGPPMSPMLPQGVPPQVA-DPFINLPIDFVSNGKPTGVYQWSGAPGFQQVAQMPV 279
S P P +P P PP P N P + KP + AP + P
Sbjct: 197 SYKPQPKPTPTPYTPTPTPPSYKPQPKPNPPPTYKPQPKPNPPPTYKPAPPTYKPQPKPN 256
Query: 280 DPFSYGSQPILPSRPNYNVPSYQSKPKPQQTNTKIT 387
P +Y QP P+ Y P+Y+ +PKP T T T
Sbjct: 257 PPPTYKPQP-KPTPTPYTPPTYKPQPKPTPTPTPYT 291
Score = 33.1 bits (72), Expect = 0.61
Identities = 31/114 (27%), Positives = 39/114 (34%), Gaps = 4/114 (3%)
Frame = +1
Query: 109 PPTIGPPMSPMLPQGVPPQVADPFINLPIDFVSNGKPTGV-YQWSGAPGFQQVAQMPVDP 285
PP P P PP+ P + KPT Y + P + P P
Sbjct: 102 PPAHTPTPPTYTPTPTPPKPTPP------TYKPQPKPTPAPYTPTPTPPTYKPQPKPTPP 155
Query: 286 FSYGSQPI---LPSRPNYNVPSYQSKPKPQQTNTKITNLKGQYVFNGKPADSVY 438
+Y QP P P PSY+ +PKP T T Y KP + Y
Sbjct: 156 PTYKPQPKPTPTPYTPTPTPPSYKPQPKPTPTPYTPTPTPPSYKPQPKPTPTPY 209
Score = 29.9 bits (64), Expect = 5.7
Identities = 32/110 (29%), Positives = 37/110 (33%), Gaps = 5/110 (4%)
Frame = +1
Query: 109 PPTIGPPMSPMLPQGVP-PQVADPFINLPIDFVSNGKPTGVYQWSGAPGFQQVAQMPVD- 282
PP PP P+ P P P P + KPT + P P
Sbjct: 118 PPKPTPPTYKPQPKPTPAPYTPTP---TPPTYKPQPKPTPPPTYKPQPKPTPTPYTPTPT 174
Query: 283 PFSYGSQPI---LPSRPNYNVPSYQSKPKPQQTNTKITNLKGQYVFNGKP 423
P SY QP P P PSY+ +PKP T T Y KP
Sbjct: 175 PPSYKPQPKPTPTPYTPTPTPPSYKPQPKPTPTPYTPTPTPPSYKPQPKP 224
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 37.9 bits (84), Expect = 0.021
Identities = 32/96 (33%), Positives = 37/96 (38%), Gaps = 6/96 (6%)
Frame = +1
Query: 94 GYISQPPTIGP-----PMSPMLPQGVPPQVADP-FINLPIDFVSNGKPTGVYQWSGAPGF 255
G+ QPP + P P P PPQ A P F+ P P Q++ PG
Sbjct: 17 GFPPQPPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGP 76
Query: 256 QQVAQMPVDPFSYGSQPILPSRPNYNVPSYQSKPKP 363
Q Q P P Y P P P Y V S Q P P
Sbjct: 77 PQQQQPPPPPQMYYQPP--PPPPPYGVNSSQPPPPP 110
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 32.7 bits (71), Expect = 0.81
Identities = 30/95 (31%), Positives = 36/95 (37%), Gaps = 5/95 (5%)
Frame = +1
Query: 112 PTIGPPMSPMLPQGVPPQVADPFINLPIDFVSNG----KPTGVYQWSGAPGFQQVAQMPV 279
PT PP SP LP PP A P P N KP S P P
Sbjct: 56 PTSPPPASPPLPSATPPLAASPPPPPPPPPPRNSPSPPKPPSQAAQSPLPPTTTTTTPPT 115
Query: 280 DPFSYGSQPILPSRPN-YNVPSYQSKPKPQQTNTK 381
P + P P+ P+ Y+ PS P P T+T+
Sbjct: 116 APVPAAAPP--PTAPSPYSAPS----PTPTPTHTQ 144
>08_02_1453 -
27199228-27200579,27200712-27202646,27202905-27202966,
27203525-27203545,27204305-27204344,27204345-27204792,
27204866-27204964,27205071-27205394,27205446-27205574,
27205657-27205875,27205976-27206194,27206436-27206669,
27206773-27206943,27207466-27207577,27207955-27208010,
27208083-27208181,27208901-27209134,27209258-27209311,
27209363-27209422
Length = 1955
Score = 31.9 bits (69), Expect = 1.4
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = +1
Query: 85 LGLG-YISQPPTIGPPMSPMLPQGVPPQVADPFINLPI--DFVSNGKPTGVYQWSGAPGF 255
LG+G ++ G M PQGVPP +A P +P F S QW
Sbjct: 356 LGIGGFVPSAQIAGMHSYMMHPQGVPPSLASPNSAVPQFGSFQSQSTIQPNMQWPNQQEA 415
Query: 256 QQVAQMPVDPFSYGSQP 306
Q +Q P D +Y + P
Sbjct: 416 QNASQTP-DETNYHTSP 431
>01_07_0082 - 40965947-40967023
Length = 358
Score = 31.5 bits (68), Expect = 1.9
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +1
Query: 127 PMSPMLPQGVPPQVADPFINLPIDFVSNGKPTGVYQWSGAPG-FQQVAQMP--VDPFSYG 297
P+S +L V F++ + +S+GKP GV +S G Q P P +YG
Sbjct: 93 PLSELLSGAPDGAVPAKFVSYQVRKISSGKPQGVLNFSYKIGEVTQSGSYPGASPPVAYG 152
Query: 298 SQPILPSRP 324
P P+ P
Sbjct: 153 QAPPAPAYP 161
>12_02_0318 - 17457182-17462232,17462745-17462955,17463356-17463403,
17466161-17466346
Length = 1831
Score = 30.7 bits (66), Expect = 3.3
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = -3
Query: 755 HLLSIIIDSSQLCV*LLFKCHKSCYNGEI--AVYDHLDFL 642
H L +I+D+ C L+ +C KSC NG+ +Y +L+ L
Sbjct: 1428 HTLGVIVDARAGCA-LMAQCLKSCSNGDAISRIYSYLEAL 1466
>01_06_0995 +
33661367-33661380,33661729-33661826,33662059-33662214,
33663307-33663926,33664020-33664090,33664176-33664427,
33664494-33664611,33664715-33664886,33664970-33665511
Length = 680
Score = 26.2 bits (55), Expect(2) = 3.8
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +1
Query: 136 PMLPQGVPPQVADPF 180
P+L +GVP ++ADPF
Sbjct: 510 PILAEGVPRKIADPF 524
Score = 22.6 bits (46), Expect(2) = 3.8
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 280 DPFSYGSQPILPSR 321
DPF YGS I P+R
Sbjct: 522 DPFDYGSGNINPNR 535
>09_01_0079 -
1159963-1160211,1160303-1160509,1160631-1160801,
1161732-1161869,1162184-1162273,1162354-1162431,
1162510-1163166,1163245-1163363,1164305-1164584
Length = 662
Score = 30.3 bits (65), Expect = 4.3
Identities = 27/86 (31%), Positives = 35/86 (40%)
Frame = +1
Query: 112 PTIGPPMSPMLPQGVPPQVADPFINLPIDFVSNGKPTGVYQWSGAPGFQQVAQMPVDPFS 291
P++GP M PM P GVP F P N +P GFQQ P
Sbjct: 421 PSVGPRM-PMFPPGVPGVGQQLFYGQPPPAFINTQP--------GFGFQQ-------PLM 464
Query: 292 YGSQPILPSRPNYNVPSYQSKPKPQQ 369
G +P PN+ +P Q +PQ+
Sbjct: 465 PGMRPGAGPMPNFIMPMVQQGQQPQR 490
>07_03_0471 + 18501496-18502104,18503009-18503260,18503367-18503537,
18503693-18503743,18503868-18503960,18504125-18504220,
18504318-18504368,18504452-18504570,18504909-18505017,
18505391-18505513,18505590-18505661,18505963-18506034,
18506125-18506191,18506260-18506402,18506494-18506565,
18506632-18506760,18507317-18507472,18507579-18507692,
18507791-18507889,18507974-18508051,18508402-18508536,
18509081-18509155,18509247-18509361,18509458-18509828,
18509903-18509965,18510049-18510120,18510285-18510413,
18510512-18510628,18510902-18511018
Length = 1289
Score = 29.9 bits (64), Expect = 5.7
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +1
Query: 199 FVSNGKPTGVYQWSGAPGFQQVAQMPVDPFSYG-SQP-ILPSRPNYNVPSYQSKPKPQQT 372
FV G P G ++ P + +MP PF+ SQP +P+R + + P P PQ
Sbjct: 1004 FVPFGPPNGAHKPGVHPSGYPLPRMPFPPFAGAHSQPYAIPTRGSLHGPIGAVPPVPQPG 1063
Query: 373 N 375
N
Sbjct: 1064 N 1064
>06_03_0138 +
17093196-17093325,17095704-17095804,17096224-17096292,
17096403-17097650,17097763-17097871,17099459-17099655,
17099732-17099842,17099927-17100079
Length = 705
Score = 29.9 bits (64), Expect = 5.7
Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Frame = +1
Query: 121 GPPMSPMLPQGVPPQVADPFINLPIDFVSNGKPTGVYQWS-GAPGFQQVAQMPVDPFSYG 297
G M P LPQ P + + P+ +NG P G+ Q QMP
Sbjct: 129 GIQMPPPLPQFQPGASLPSWNSSPMPSSANGAPASTTTADPGSHNGQSGIQMP------- 181
Query: 298 SQPILPS-RPNYNVPSYQSKPKPQQTN 375
P LP +P ++PS+ S P P N
Sbjct: 182 --PPLPQYQPGASLPSWNSSPMPSSAN 206
Score = 29.9 bits (64), Expect = 5.7
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 88 GLGYISQPPTIGPPMSPMLPQGVPPQVADPFINLPI 195
G ++ QPP + PP +PQ + + P +N P+
Sbjct: 226 GFPHLQQPPFLRPPHGLTIPQALQQPIQYPGLNAPL 261
>05_03_0180 - 9272700-9272979,9273976-9274145
Length = 149
Score = 29.9 bits (64), Expect = 5.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 124 PPMSPMLPQGVPPQVADPFINLPIDF 201
PP P + P ++ DPFI LP+DF
Sbjct: 99 PPSQPGF-EAEPEEIEDPFIGLPLDF 123
>02_02_0059 -
6432945-6433115,6433975-6434061,6434585-6434787,
6435281-6435392,6435473-6435517,6435622-6435726,
6435946-6435996,6436026-6436103,6437258-6437313,
6437784-6437853,6438288-6438392,6438525-6438637,
6439354-6439534,6439635-6440390
Length = 710
Score = 29.5 bits (63), Expect = 7.5
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +1
Query: 124 PPMSPMLPQGVPPQVADPFINLPIDFVSNGKPTGVYQWSGAPGFQQVAQMPV-DPFSYGS 300
PP+ P P G+ P D + L D +G+P + PG P D F YG
Sbjct: 34 PPLPPPPPPGMVPVEGDRLLGLIRD---HGRPP----FPPPPGMLHGEPYPPPDRFGYGG 86
Query: 301 QPILPSRPNYNVP 339
P PNY+ P
Sbjct: 87 GRGYPPPPNYDNP 99
>01_01_0907 +
7128397-7128497,7129944-7130022,7130470-7130568,
7130654-7130767,7130960-7131102,7131716-7131797,
7132425-7132510,7132879-7133112,7134684-7135162,
7135309-7136027
Length = 711
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Frame = +1
Query: 274 PVDPFSYGSQPILPSRPNYNVPS---YQSKPKPQQ 369
P DPF S LP YN P+ Q++ +PQQ
Sbjct: 398 PADPFGVNSSSTLPGSQPYNAPTQHPLQAQQQPQQ 432
>10_08_0949 -
21759821-21759833,21759985-21760301,21760650-21760728,
21760816-21760912,21761305-21761410
Length = 203
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 112 PTIGPPMSPMLPQGVPPQVADPFINLPIDFVSNGKPTGVYQWSGAPG 252
P PP +P+ P V P VA P +LP + Q++G PG
Sbjct: 134 PATVPPAAPV-PSTVVPPVAAPSSSLPPMSAAGASAMSPMQFAGTPG 179
>03_02_0491 +
8854438-8854657,8854897-8854942,8855268-8855307,
8856025-8856090,8856237-8856318,8857036-8857595,
8857681-8857771,8858300-8858316
Length = 373
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = -1
Query: 727 PSYVCNCFLNVIKVVTMAKSRFTIISTFFRVIF*LTNFLPYSSVLILTTQV 575
P +C CF+N+ K T ++ I++ F ++ P SS+L+ T++
Sbjct: 69 PIKICGCFVNIFKTSTFTRADELIVNVGSCNHFQISQEGPVSSLLLPLTEM 119
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 29.1 bits (62), Expect = 9.9
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 109 PPTIGPPMSPMLPQGVPPQVADP 177
PP PP P P G+PP++ P
Sbjct: 276 PPQAPPPPPPNAPMGMPPRIPPP 298
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,904,299
Number of Sequences: 37544
Number of extensions: 560721
Number of successful extensions: 1628
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1600
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 5023712764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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