Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_E05_e517_09.seq
(1617 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 241 4e-63
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 239 2e-62
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 239 2e-62
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 239 2e-62
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 239 2e-62
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 239 2e-62
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 237 8e-62
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 191 5e-48
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 136 2e-31
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 56 4e-07
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 241 bits (591), Expect = 4e-63
Identities = 108/155 (69%), Positives = 125/155 (80%)
Frame = +1
Query: 100 IF*KMGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLS 279
+F +MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++
Sbjct: 4 LFRRMGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVT 63
Query: 280 NKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXD 459
N+D+ CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG D
Sbjct: 64 NRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMD 123
Query: 460 SLYTGATEVTGDEYNVEPVDNGPGAFMMLLGCRLS 564
+Y G EVTGDEYNVE +D PGAF L L+
Sbjct: 124 KIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLA 158
Score = 56.0 bits (129), Expect = 4e-07
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +3
Query: 585 RVFGAMKGAVDGGLXVPHSIKRFXGYDAES 674
+VFGA+KGAVDGGL +PHS KRF GYD+ES
Sbjct: 165 KVFGALKGAVDGGLSIPHSTKRFPGYDSES 194
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 239 bits (585), Expect = 2e-62
Identities = 107/151 (70%), Positives = 122/151 (80%)
Frame = +1
Query: 112 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 291
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 292 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 471
CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG D +Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 472 GATEVTGDEYNVEPVDNGPGAFMMLLGCRLS 564
G EVTGDEYNVE +D PGAF L L+
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLA 151
Score = 56.0 bits (129), Expect = 4e-07
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +3
Query: 585 RVFGAMKGAVDGGLXVPHSIKRFXGYDAES 674
+VFGA+KGAVDGGL +PHS KRF GYD+ES
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSES 187
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 239 bits (585), Expect = 2e-62
Identities = 107/151 (70%), Positives = 122/151 (80%)
Frame = +1
Query: 112 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 291
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 292 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 471
CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG D +Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 472 GATEVTGDEYNVEPVDNGPGAFMMLLGCRLS 564
G EVTGDEYNVE +D PGAF L L+
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLA 151
Score = 56.0 bits (129), Expect = 4e-07
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +3
Query: 585 RVFGAMKGAVDGGLXVPHSIKRFXGYDAES 674
+VFGA+KGAVDGGL +PHS KRF GYD+ES
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSES 187
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 239 bits (585), Expect = 2e-62
Identities = 107/151 (70%), Positives = 122/151 (80%)
Frame = +1
Query: 112 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 291
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 292 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 471
CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG D +Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 472 GATEVTGDEYNVEPVDNGPGAFMMLLGCRLS 564
G EVTGDEYNVE +D PGAF L L+
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLA 151
Score = 56.0 bits (129), Expect = 4e-07
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +3
Query: 585 RVFGAMKGAVDGGLXVPHSIKRFXGYDAES 674
+VFGA+KGAVDGGL +PHS KRF GYD+ES
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSES 187
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 239 bits (585), Expect = 2e-62
Identities = 107/151 (70%), Positives = 122/151 (80%)
Frame = +1
Query: 112 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 291
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 292 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 471
CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG D +Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 472 GATEVTGDEYNVEPVDNGPGAFMMLLGCRLS 564
G EVTGDEYNVE +D PGAF L L+
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLA 151
Score = 56.0 bits (129), Expect = 4e-07
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +3
Query: 585 RVFGAMKGAVDGGLXVPHSIKRFXGYDAES 674
+VFGA+KGAVDGGL +PHS KRF GYD+ES
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSES 187
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 239 bits (585), Expect = 2e-62
Identities = 107/151 (70%), Positives = 122/151 (80%)
Frame = +1
Query: 112 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 291
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 292 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 471
CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG D +Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 472 GATEVTGDEYNVEPVDNGPGAFMMLLGCRLS 564
G EVTGDEYNVE +D PGAF L L+
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLA 151
Score = 56.0 bits (129), Expect = 4e-07
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +3
Query: 585 RVFGAMKGAVDGGLXVPHSIKRFXGYDAES 674
+VFGA+KGAVDGGL +PHS KRF GYD+ES
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSES 187
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 237 bits (580), Expect = 8e-62
Identities = 106/151 (70%), Positives = 121/151 (80%)
Frame = +1
Query: 112 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 291
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 292 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 471
CQ+AY+RIEGD IVCA Y+HELP+YG+KVGLTNYAAAYCTG D +Y
Sbjct: 61 ICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 472 GATEVTGDEYNVEPVDNGPGAFMMLLGCRLS 564
G EVTGDEYNVE +D PGAF L L+
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLA 151
Score = 56.0 bits (129), Expect = 4e-07
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +3
Query: 585 RVFGAMKGAVDGGLXVPHSIKRFXGYDAES 674
+VFGA+KGAVDGGL +PHS KRF GYD+ES
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSES 187
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 191 bits (466), Expect = 5e-48
Identities = 83/98 (84%), Positives = 95/98 (96%)
Frame = +1
Query: 112 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 291
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 292 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAA 405
CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAA
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAA 98
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 136 bits (329), Expect = 2e-31
Identities = 60/101 (59%), Positives = 73/101 (72%)
Frame = +1
Query: 262 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXX 441
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 442 XXXXXDSLYTGATEVTGDEYNVEPVDNGPGAFMMLLGCRLS 564
D +Y G EVTGDEYNVE +D PGAF L L+
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLA 101
Score = 37.5 bits (83), Expect = 0.14
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3
Query: 585 RVFGAMKGAVDGGLXVPH 638
+VFGA+KGAVDGGL +PH
Sbjct: 108 KVFGALKGAVDGGLSIPH 125
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 56.0 bits (129), Expect = 4e-07
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +3
Query: 585 RVFGAMKGAVDGGLXVPHSIKRFXGYDAES 674
+VFGA+KGAVDGGL +PHS KRF GYD+ES
Sbjct: 6 KVFGALKGAVDGGLSIPHSTKRFPGYDSES 35
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,686,052
Number of Sequences: 237096
Number of extensions: 2744775
Number of successful extensions: 9321
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9321
length of database: 76,859,062
effective HSP length: 94
effective length of database: 54,572,038
effective search space used: 24229984872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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