Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_E04_e509_10.seq
         (1534 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    27   0.37 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    26   0.85 
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    25   1.1  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    25   1.5  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    25   1.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    25   2.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   6.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   7.9  

>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 27.1 bits (57), Expect = 0.37
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = -2

Query: 783 PPIPRIGKPGSLLPIAETARSPIGRVALPDSPPYVVCFSR 664
           P +PR+G P          RS   + + P  PP V C  R
Sbjct: 71  PSVPRLGHPQWPFAWGSLXRSSSPQTSAPTGPPIVRCALR 110


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 25.8 bits (54), Expect = 0.85
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +3

Query: 732 SPLSVTDSRVSQSWESVGLILQNPHC 809
           +P ++T+S+  + W    ++  NPHC
Sbjct: 467 NPRTITESKNFEPWREKCVVEGNPHC 492


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 27/103 (26%), Positives = 38/103 (36%)
 Frame = -2

Query: 798 SAESIPPIPRIGKPGSLLPIAETARSPIGRVALPDSPPYVVCFSRPTAGHGVPSALIDIN 619
           S  + PP P +         A+ A + I    LP +       +  T     PS      
Sbjct: 129 STNTSPPSPILSNRFGENEEADAASNVISSTPLPPTTSTTTRTTLTTKFTTKPSTKPTNK 188

Query: 618 PDTVFIADTPLAPPSYAATAMLTMSVIFGVSFTKNGILIALRT 490
           P  V +   P APP     A L  +V FG +    GI+ +L T
Sbjct: 189 P--VVVTKPPQAPPFATVGANLQATVSFGTNLV-GGIVRSLGT 228


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 66  NSARGEGDSSKAGDSLSPR 122
           N  +GEG S   GD +SP+
Sbjct: 301 NKTKGEGGSEGGGDDISPQ 319


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 66  NSARGEGDSSKAGDSLSPR 122
           N  +GEG S   GD +SP+
Sbjct: 303 NKTKGEGGSEGGGDDISPQ 321


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +1

Query: 145 GYQRVTSYSSWCDIRRKLRTWT--RIFPQYRTHL 240
           GY+ V  Y++W   R K+  +T   I P   TH+
Sbjct: 86  GYKVVCYYTNWSQYRVKIGKFTPEHIIPDLCTHI 119


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 14/71 (19%), Positives = 32/71 (45%), Gaps = 8/71 (11%)
 Frame = -2

Query: 858 CTALHICTTGAPHIINCSAD------SAESIPPIPRIGKPGSLLPIAETAR--SPIGRVA 703
           C A ++C +G  + ++C+ +      S +    +    +PG ++ +A + R    +    
Sbjct: 572 CAAYYVCRSGLSYHLSCAENMMFDPMSGKCEYSLGEKCRPGQIIQVANSLRQYEDLLEYE 631

Query: 702 LPDSPPYVVCF 670
             +  P VVC+
Sbjct: 632 AKEEGPKVVCY 642


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = -2

Query: 843 ICTTGAPHIINCSADSAESIPPIPRIGKPGSLLP 742
           +  TG  H+I+   + + + PP P + +   L P
Sbjct: 516 LAATGGDHVISLIDEISFTFPPSPPLSQIHDLSP 549


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 300,948
Number of Sequences: 336
Number of extensions: 6613
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 46091250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)