Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_E04_e509_10.seq
(1534 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0670 - 30764007-30764135,30764404-30764548,30765200-307653... 184 2e-46
06_03_1310 + 29238644-29240260 33 0.45
01_05_0504 + 22781737-22781799,22782033-22782287,22783652-22784077 33 0.60
07_03_0674 + 20598668-20598774,20599456-20600467 32 1.4
01_01_0757 - 5840736-5842574 31 1.8
06_03_0331 - 19644913-19645287 31 3.2
12_02_0378 + 18349089-18350402,18351109-18351155,18351266-18351368 30 4.2
10_02_0088 - 5121626-5122120,5122149-5122169 30 4.2
06_01_0891 - 6819693-6819701,6820681-6820782,6821137-6821304,682... 30 4.2
01_05_0584 + 23435620-23436408,23436966-23437508 30 4.2
02_02_0224 - 8033098-8034552 30 5.6
07_03_1507 - 27228032-27228742 29 7.4
05_04_0029 - 17321378-17321905,17323348-17323525,17323531-173239... 29 9.8
05_01_0044 + 307711-307883,308001-308063,308200-308316,308558-30... 29 9.8
03_02_0362 - 7809752-7810357,7811018-7811914 29 9.8
>02_05_0670 - 30764007-30764135,30764404-30764548,30765200-30765309,
30765578-30765761,30765857-30765969,30766242-30766412,
30766493-30766756,30767537-30767782
Length = 453
Score = 184 bits (448), Expect = 2e-46
Identities = 111/324 (34%), Positives = 163/324 (50%), Gaps = 9/324 (2%)
Frame = +2
Query: 50 PPGCXXXXXXXXXXEQGWGFAVTKTFSLDKDMVTNVSPRI--VRGVTSGENYGPGQGSFL 223
PPG ++GWG + KT SLD + V NV+PR +R +G P G +
Sbjct: 59 PPG-TNYTVMKRAFDEGWGGVIAKTVSLDAEKVINVTPRYARLRADPNGSTKSPIIG-WQ 116
Query: 224 NIELISEKCEAYWCQSVTELKKDFPNKVIIASIMCSYNEEDWTLLSKKAEAAGADALELN 403
NIELIS++ +LKK++P++++I SIM YN+ W L ++ E +G DALE+N
Sbjct: 117 NIELISDRPLETMLNEFKQLKKEYPDRILIGSIMEEYNKAAWHELIERVEESGVDALEIN 176
Query: 404 LSCPHGMGESGMGLACGQDPVLVKGISQWVRKAIKIPFFVKLTPNITDIVSIAVAAYEGG 583
SCPHGM E MG A GQD L++ + W+ + +P + K+TPNITDI A + + G
Sbjct: 177 FSCPHGMPERKMGAAVGQDCDLLEEVCGWINEKATVPVWAKMTPNITDITKPARISLKSG 236
Query: 584 ASGVSAINTVSGLMSIRADG-TPWPAVGREKHTTYGGLSGNATRPMGLRAVSAIGNR--- 751
GVSAINT+ +M I P P V E ++T GG S A P+ L V I
Sbjct: 237 CEGVSAINTIMSVMGINLKTLRPEPCV--EGYSTPGGYSARAVHPIALAKVMQIARMMKE 294
Query: 752 --XXXXXXXXXXXXDSAESALQFIMCGAPVVQICSAVQNQDFTVVDDYITGLKAPV-VHS 922
++ A +FI+ GA VQ+C+ V + +V L+ + H+
Sbjct: 295 EFADGQSLSAIGGVETGNDAAEFILLGADTVQVCTGVMMHGYGLVKKLCAELQDFMRQHN 354
Query: 923 FXGLTDGRDSXPPGFXPXXETLSR 994
F + D R + P F + + R
Sbjct: 355 FSSIEDFRGASLPYFTTHTDLVHR 378
>06_03_1310 + 29238644-29240260
Length = 538
Score = 33.5 bits (73), Expect = 0.45
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 840 CTTGAPHIINCSADSAESIPPIPRIGKPGSLLPIAETARSPIGRVALP-DSPPYVVCFSR 664
C A H +CS ++ PP R +PG P+A RSP+ P +PP S
Sbjct: 347 CAAAAAHPFDCSKAQCQATPPTTR--RPGGRTPLA-PHRSPLPHHMPPRRTPPTPPPPSS 403
Query: 663 PTAGHGVP 640
PT H P
Sbjct: 404 PTPSHLPP 411
>01_05_0504 + 22781737-22781799,22782033-22782287,22783652-22784077
Length = 247
Score = 33.1 bits (72), Expect = 0.60
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 269 SVTELKKDFPNKVIIASIMCSYNEEDWTLLSKKAEAAGADALELNLSCPHG 421
S+ + KKDFP ++I+S++CS N TLL A ++ L+ P G
Sbjct: 96 SLMKSKKDFPKVLLISSVLCSLNYAVTTLLRYLIYGEDVQA-QVTLNLPSG 145
>07_03_0674 + 20598668-20598774,20599456-20600467
Length = 372
Score = 31.9 bits (69), Expect = 1.4
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = -2
Query: 720 PIGRVALPDSPPYVVCFSRPTAGHGVPSALIDINPDTVFIADT 592
P+G A P SP YVV F H P ALID+ D + +T
Sbjct: 107 PLGEPAHPLSPHYVVAFRGTMMSH--PKALIDLYLDAKIMVNT 147
>01_01_0757 - 5840736-5842574
Length = 612
Score = 31.5 bits (68), Expect = 1.8
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 645 VPSALIDINPDTVFIADTPLAPP--SYAATAMLTMSVIFGVSFTKNGILIA 499
VP A P T F D PL PP S + L +S FG ++TK + A
Sbjct: 33 VPDAAAADTPTTYFEVDRPLRPPPGSSGPCSTLLLSSSFGFTYTKPPVTAA 83
>06_03_0331 - 19644913-19645287
Length = 124
Score = 30.7 bits (66), Expect = 3.2
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 726 APSPLSVTDSRVSQSWESVGLILQNPHCSL 815
AP+P + T + +QSW + G++L+ CSL
Sbjct: 90 APAPATATATATAQSWLAGGVVLKPGRCSL 119
>12_02_0378 + 18349089-18350402,18351109-18351155,18351266-18351368
Length = 487
Score = 30.3 bits (65), Expect = 4.2
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 10/53 (18%)
Frame = -2
Query: 804 ADSAESIPPI-PRIGKPG---------SLLPIAETARSPIGRVALPDSPPYVV 676
ADS E PP+ P G P S P TAR P+ R A P++PP VV
Sbjct: 2 ADSGEPPPPLCPLCGHPAASYTSSSSSSPSPSQPTARPPLKRKAPPEAPPAVV 54
>10_02_0088 - 5121626-5122120,5122149-5122169
Length = 171
Score = 30.3 bits (65), Expect = 4.2
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +3
Query: 660 WGVKSIPRMGDYRVMQRDRWDYAPS---PLSVTDSRVSQ-SWESVGLILQNPHCSL*CAV 827
W VK IPR D +W PS ++V + VSQ S SVG+++++ C++ +
Sbjct: 4 WIVKYIPREIDLCKQSETKWQAPPSGWAKINVDGAFVSQTSKGSVGIVIRDHECNVLLSA 63
Query: 828 HLSYRY 845
RY
Sbjct: 64 WSVMRY 69
>06_01_0891 -
6819693-6819701,6820681-6820782,6821137-6821304,
6821546-6821629,6821927-6822105,6822418-6822544
Length = 222
Score = 30.3 bits (65), Expect = 4.2
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 176 GVTSGENYGPGQGSFLNIELISEKCEAYWCQ 268
GV G G G+ L+IE++ E AYWCQ
Sbjct: 62 GVLRGAGLGTFAGAVLSIEIL-EASRAYWCQ 91
>01_05_0584 + 23435620-23436408,23436966-23437508
Length = 443
Score = 30.3 bits (65), Expect = 4.2
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 284 KKDFPNKVIIASIMCSYNEEDWTLLSKKAEAAGADALELNLSCPHG 421
+KDFP ++I+S++CS N +L K A ++ L+ P G
Sbjct: 258 RKDFPKVLLISSVLCSLNYAVTAVLGYKIYGEDVQA-QVTLNLPTG 302
>02_02_0224 - 8033098-8034552
Length = 484
Score = 29.9 bits (64), Expect = 5.6
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 705 ALPDSPPYVVCFSRPTAGHGVPSA 634
+LP PP+VV + P AGH +P A
Sbjct: 12 SLPPPPPHVVLMASPGAGHLIPLA 35
>07_03_1507 - 27228032-27228742
Length = 236
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -2
Query: 699 PDSPPYVVCFSRPTAGHGVPSALIDINPDTVFIADTPLAPPS 574
P SPP V +S P V +A ++P PL+PPS
Sbjct: 15 PRSPPPVAIYSIPVLRSSVSAARRSLSPSDSCSRRAPLSPPS 56
>05_04_0029 -
17321378-17321905,17323348-17323525,17323531-17323910,
17323936-17324052
Length = 400
Score = 29.1 bits (62), Expect = 9.8
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +2
Query: 284 KKDFPNKVIIASIMCSYN 337
KKDFP ++I+S++CS N
Sbjct: 220 KKDFPKVLLISSVLCSLN 237
>05_01_0044 +
307711-307883,308001-308063,308200-308316,308558-309359
Length = 384
Score = 29.1 bits (62), Expect = 9.8
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +2
Query: 209 QGSFLNIELISEKCEAYWCQSVTELKKDFPNKVIIASIMCSYNEEDWTLLSKKAEAAGAD 388
+G+FL L+S + W L K++PNK++ I C+ + LL+ A
Sbjct: 184 KGTFLM--LLSNTTWSLWIVLQASLLKEYPNKLLATLIQCALSTLQSLLLAAAVVRADPA 241
Query: 389 ALELNL 406
A L L
Sbjct: 242 AWRLRL 247
>03_02_0362 - 7809752-7810357,7811018-7811914
Length = 500
Score = 29.1 bits (62), Expect = 9.8
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2
Query: 444 RPIPDSPMPCGHDRF 400
RP+PD CGHDRF
Sbjct: 98 RPVPDIVRACGHDRF 112
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,274,049
Number of Sequences: 37544
Number of extensions: 811558
Number of successful extensions: 2547
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2517
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4930895900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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