Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_E04_e509_10.seq
         (1534 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   3.3  
Z49832-1|CAA89993.1|  155|Anopheles gambiae serine proteinase pr...    25   5.8  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    25   7.7  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    25   7.7  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    25   7.7  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    25   7.7  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 25.8 bits (54), Expect = 3.3
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -3

Query: 1481 GGXKXXXPGGGGLXXGXAFPXXXYXGGG 1398
            GG     PGGGG   G   P     GGG
Sbjct: 205  GGSGGGAPGGGGGSSGGPGPGGGGGGGG 232


>Z49832-1|CAA89993.1|  155|Anopheles gambiae serine proteinase
           protein.
          Length = 155

 Score = 25.0 bits (52), Expect = 5.8
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = -2

Query: 660 TAGHGVPSALIDINPDTVFIADTPLAPPS 574
           TA H   + L +I PDTV +ADT LA  S
Sbjct: 3   TAAH-CSADLDNIPPDTVRLADTDLASTS 30


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 7.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 580 WSKWSISYKHRIWID 624
           W+KWS+S K R+  D
Sbjct: 222 WNKWSLSVKRRLATD 236


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 24.6 bits (51), Expect = 7.7
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +2

Query: 347 WTLLSKKAEAAGADALELNLSCPHGMGESGMGLAC--GQDP-VLVKGISQWVRKAI-KIP 514
           W L+S++     A  L   + CPH   +    + C  G+DP VLV   ++W    I + P
Sbjct: 393 WALVSREEATLRALRLAEAVGCPHEPSKLSDAVECLRGKDPHVLVN--NEWGTLGICEFP 450

Query: 515 F 517
           F
Sbjct: 451 F 451


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 24.6 bits (51), Expect = 7.7
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +2

Query: 347 WTLLSKKAEAAGADALELNLSCPHGMGESGMGLAC--GQDP-VLVKGISQWVRKAI-KIP 514
           W L+S++     A  L   + CPH   +    + C  G+DP VLV   ++W    I + P
Sbjct: 393 WALVSREEATLRALRLAEAVGCPHEPSKLSDAVECLRGKDPHVLVN--NEWGTLGICEFP 450

Query: 515 F 517
           F
Sbjct: 451 F 451


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 24.6 bits (51), Expect = 7.7
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +2

Query: 347 WTLLSKKAEAAGADALELNLSCPHGMGESGMGLAC--GQDP-VLVKGISQWVRKAI-KIP 514
           W L+S++     A  L   + CPH   +    + C  G+DP VLV   ++W    I + P
Sbjct: 279 WALVSREEATLRALRLAEAVGCPHEPSKLSDAVECLRGKDPHVLVN--NEWGTLGICEFP 336

Query: 515 F 517
           F
Sbjct: 337 F 337


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,339,818
Number of Sequences: 2352
Number of extensions: 26401
Number of successful extensions: 41
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 180032985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)