Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_E03_e501_09.seq
         (1519 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U68567-1|AAC50812.1|  988|Homo sapiens lysosomal acid alpha-mann...    83   3e-15
U68382-1|AAC50811.1|  323|Homo sapiens truncated lysosomal acid ...    83   3e-15
U60899-1|AAC51362.1| 1010|Homo sapiens lysosomal alpha-mannosida...    83   3e-15
U60266-1|AAC34130.1| 1011|Homo sapiens lysosomal alpha-mannosida...    83   3e-15
U05572-1|AAB03816.1|  987|Homo sapiens alpha-mannosidase protein.      83   3e-15
BC000736-1|AAH00736.1| 1011|Homo sapiens mannosidase, alpha, cla...    83   3e-15
AB209921-1|BAD93158.1| 1007|Homo sapiens mannosidase, alpha, cla...    83   3e-15
L28821-1|AAA92022.1|  796|Homo sapiens alpha mannosidase II isoz...    40   0.024
D55649-1|BAA09510.1| 1139|Homo sapiens alpha mannosidase II isoz...    40   0.024
U31520-1|AAC50302.1| 1144|Homo sapiens alpha mannosidase II prot...    36   0.29 
D63998-1|BAA10017.1| 1143|Homo sapiens golgi alpha-mannosidaseII...    36   0.29 
BC142696-1|AAI42697.1| 1143|Homo sapiens MAN2A1 protein protein.       36   0.29 
BC142656-1|AAI42657.1| 1143|Homo sapiens MAN2A1 protein protein.       36   0.29 

>U68567-1|AAC50812.1|  988|Homo sapiens lysosomal acid
           alpha-mannosidase protein.
          Length = 988

 Score = 83.0 bits (196), Expect = 3e-15
 Identities = 35/61 (57%), Positives = 43/61 (70%)
 Frame = +2

Query: 170 ACGXESCPDTPKDVLNVHXVPHTHDDVGWLKTVDQYYYGSNNXIQKXGVXDILDXCYTGI 349
           A G E+CP    ++LNVH +PHTHDDVGWLKTVDQY+YG  N IQ  GV  ILD   + +
Sbjct: 26  AGGYETCPTVQPNMLNVHLLPHTHDDVGWLKTVDQYFYGIKNDIQHAGVQYILDSVISAL 85

Query: 350 M 352
           +
Sbjct: 86  L 86



 Score = 32.7 bits (71), Expect = 3.6
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 385 ETAFFWKWWVRXTEAVXDTAHTLVRQG 465
           E AFF +WW + T A  +    LVRQG
Sbjct: 97  EIAFFSRWWHQQTNATQEVVRDLVRQG 123


>U68382-1|AAC50811.1|  323|Homo sapiens truncated lysosomal acid
           alpha-mannosidase protein.
          Length = 323

 Score = 83.0 bits (196), Expect = 3e-15
 Identities = 35/61 (57%), Positives = 43/61 (70%)
 Frame = +2

Query: 170 ACGXESCPDTPKDVLNVHXVPHTHDDVGWLKTVDQYYYGSNNXIQKXGVXDILDXCYTGI 349
           A G E+CP    ++LNVH +PHTHDDVGWLKTVDQY+YG  N IQ  GV  ILD   + +
Sbjct: 26  AGGYETCPTVQPNMLNVHLLPHTHDDVGWLKTVDQYFYGIKNDIQHAGVQYILDSVISAL 85

Query: 350 M 352
           +
Sbjct: 86  L 86



 Score = 32.7 bits (71), Expect = 3.6
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 385 ETAFFWKWWVRXTEAVXDTAHTLVRQG 465
           E AFF +WW + T A  +    LVRQG
Sbjct: 97  EIAFFSRWWHQQTNATQEVVRDLVRQG 123


>U60899-1|AAC51362.1| 1010|Homo sapiens lysosomal alpha-mannosidase
           protein.
          Length = 1010

 Score = 83.0 bits (196), Expect = 3e-15
 Identities = 35/61 (57%), Positives = 43/61 (70%)
 Frame = +2

Query: 170 ACGXESCPDTPKDVLNVHXVPHTHDDVGWLKTVDQYYYGSNNXIQKXGVXDILDXCYTGI 349
           A G E+CP    ++LNVH +PHTHDDVGWLKTVDQY+YG  N IQ  GV  ILD   + +
Sbjct: 48  AGGYETCPTVQPNMLNVHLLPHTHDDVGWLKTVDQYFYGIKNDIQHAGVQYILDSVISAL 107

Query: 350 M 352
           +
Sbjct: 108 L 108



 Score = 32.7 bits (71), Expect = 3.6
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 385 ETAFFWKWWVRXTEAVXDTAHTLVRQG 465
           E AFF +WW + T A  +    LVRQG
Sbjct: 119 EIAFFSRWWHQQTNATQEVVRDLVRQG 145


>U60266-1|AAC34130.1| 1011|Homo sapiens lysosomal alpha-mannosidase
           protein.
          Length = 1011

 Score = 83.0 bits (196), Expect = 3e-15
 Identities = 35/61 (57%), Positives = 43/61 (70%)
 Frame = +2

Query: 170 ACGXESCPDTPKDVLNVHXVPHTHDDVGWLKTVDQYYYGSNNXIQKXGVXDILDXCYTGI 349
           A G E+CP    ++LNVH +PHTHDDVGWLKTVDQY+YG  N IQ  GV  ILD   + +
Sbjct: 49  AGGYETCPTVQPNMLNVHLLPHTHDDVGWLKTVDQYFYGIKNDIQHAGVQYILDSVISAL 108

Query: 350 M 352
           +
Sbjct: 109 L 109



 Score = 32.7 bits (71), Expect = 3.6
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 385 ETAFFWKWWVRXTEAVXDTAHTLVRQG 465
           E AFF +WW + T A  +    LVRQG
Sbjct: 120 EIAFFSRWWHQQTNATQEVVRDLVRQG 146


>U05572-1|AAB03816.1|  987|Homo sapiens alpha-mannosidase protein.
          Length = 987

 Score = 83.0 bits (196), Expect = 3e-15
 Identities = 35/61 (57%), Positives = 43/61 (70%)
 Frame = +2

Query: 170 ACGXESCPDTPKDVLNVHXVPHTHDDVGWLKTVDQYYYGSNNXIQKXGVXDILDXCYTGI 349
           A G E+CP    ++LNVH +PHTHDDVGWLKTVDQY+YG  N IQ  GV  ILD   + +
Sbjct: 26  AGGYETCPTVQPNMLNVHLLPHTHDDVGWLKTVDQYFYGIKNDIQHAGVQYILDSVISAL 85

Query: 350 M 352
           +
Sbjct: 86  L 86



 Score = 32.7 bits (71), Expect = 3.6
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 385 ETAFFWKWWVRXTEAVXDTAHTLVRQG 465
           E AFF +WW + T A  +    LVRQG
Sbjct: 97  EIAFFSRWWHQQTNATQEVVRDLVRQG 123


>BC000736-1|AAH00736.1| 1011|Homo sapiens mannosidase, alpha, class
           2B, member 1 protein.
          Length = 1011

 Score = 83.0 bits (196), Expect = 3e-15
 Identities = 35/61 (57%), Positives = 43/61 (70%)
 Frame = +2

Query: 170 ACGXESCPDTPKDVLNVHXVPHTHDDVGWLKTVDQYYYGSNNXIQKXGVXDILDXCYTGI 349
           A G E+CP    ++LNVH +PHTHDDVGWLKTVDQY+YG  N IQ  GV  ILD   + +
Sbjct: 49  AGGYETCPTVQPNMLNVHLLPHTHDDVGWLKTVDQYFYGIKNDIQHAGVQYILDSVISAL 108

Query: 350 M 352
           +
Sbjct: 109 L 109



 Score = 32.7 bits (71), Expect = 3.6
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 385 ETAFFWKWWVRXTEAVXDTAHTLVRQG 465
           E AFF +WW + T A  +    LVRQG
Sbjct: 120 EIAFFSRWWHQQTNATQEVVRDLVRQG 146


>AB209921-1|BAD93158.1| 1007|Homo sapiens mannosidase, alpha, class
           2B, member 1 precursor variant protein.
          Length = 1007

 Score = 83.0 bits (196), Expect = 3e-15
 Identities = 35/61 (57%), Positives = 43/61 (70%)
 Frame = +2

Query: 170 ACGXESCPDTPKDVLNVHXVPHTHDDVGWLKTVDQYYYGSNNXIQKXGVXDILDXCYTGI 349
           A G E+CP    ++LNVH +PHTHDDVGWLKTVDQY+YG  N IQ  GV  ILD   + +
Sbjct: 45  AGGYETCPTVQPNMLNVHLLPHTHDDVGWLKTVDQYFYGIKNDIQHAGVQYILDSVISAL 104

Query: 350 M 352
           +
Sbjct: 105 L 105



 Score = 32.7 bits (71), Expect = 3.6
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 385 ETAFFWKWWVRXTEAVXDTAHTLVRQG 465
           E AFF +WW + T A  +    LVRQG
Sbjct: 116 EIAFFSRWWHQQTNATQEVVRDLVRQG 142


>L28821-1|AAA92022.1|  796|Homo sapiens alpha mannosidase II isozyme
           protein.
          Length = 796

 Score = 39.9 bits (89), Expect = 0.024
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +2

Query: 194 DTPKDVLNVHXVPHTHDDVGWLKTVDQYY 280
           D   + L V  VPH+H+D GW+KT D+YY
Sbjct: 160 DWDAEDLQVFVVPHSHNDPGWIKTFDKYY 188


>D55649-1|BAA09510.1| 1139|Homo sapiens alpha mannosidase II isozyme
           protein.
          Length = 1139

 Score = 39.9 bits (89), Expect = 0.024
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +2

Query: 194 DTPKDVLNVHXVPHTHDDVGWLKTVDQYY 280
           D   + L V  VPH+H+D GW+KT D+YY
Sbjct: 160 DWDAEDLQVFVVPHSHNDPGWIKTFDKYY 188


>U31520-1|AAC50302.1| 1144|Homo sapiens alpha mannosidase II
           protein.
          Length = 1144

 Score = 36.3 bits (80), Expect = 0.29
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +2

Query: 212 LNVHXVPHTHDDVGWLKTVDQYY 280
           L V  VPH+H+D GWLKT + Y+
Sbjct: 166 LQVFVVPHSHNDPGWLKTFNDYF 188


>D63998-1|BAA10017.1| 1143|Homo sapiens golgi alpha-mannosidaseII
           protein.
          Length = 1143

 Score = 36.3 bits (80), Expect = 0.29
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +2

Query: 212 LNVHXVPHTHDDVGWLKTVDQYY 280
           L V  VPH+H+D GWLKT + Y+
Sbjct: 166 LQVFVVPHSHNDPGWLKTFNDYF 188


>BC142696-1|AAI42697.1| 1143|Homo sapiens MAN2A1 protein protein.
          Length = 1143

 Score = 36.3 bits (80), Expect = 0.29
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +2

Query: 212 LNVHXVPHTHDDVGWLKTVDQYY 280
           L V  VPH+H+D GWLKT + Y+
Sbjct: 166 LQVFVVPHSHNDPGWLKTFNDYF 188


>BC142656-1|AAI42657.1| 1143|Homo sapiens MAN2A1 protein protein.
          Length = 1143

 Score = 36.3 bits (80), Expect = 0.29
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +2

Query: 212 LNVHXVPHTHDDVGWLKTVDQYY 280
           L V  VPH+H+D GWLKT + Y+
Sbjct: 166 LQVFVVPHSHNDPGWLKTFNDYF 188


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,364,643
Number of Sequences: 237096
Number of extensions: 1149449
Number of successful extensions: 2031
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2031
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22581363208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)