Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_D12_e572_08.seq
(1514 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia nu... 161 3e-38
UniRef50_UPI0000E4800E Cluster: PREDICTED: similar to protein F2... 71 8e-11
UniRef50_Q10126 Cluster: Uncharacterized protein F52C9.6; n=7; C... 53 2e-05
UniRef50_UPI0000E490F6 Cluster: PREDICTED: similar to endonuclea... 40 0.23
UniRef50_A6SHR8 Cluster: Putative uncharacterized protein; n=1; ... 38 0.91
UniRef50_UPI0000DA21AD Cluster: PREDICTED: hypothetical protein;... 37 1.6
UniRef50_Q67UK5 Cluster: Putative uncharacterized protein P0479H... 36 2.8
UniRef50_Q2QUE8 Cluster: HAT family dimerisation domain containi... 36 3.7
UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to endonuclea... 35 6.4
UniRef50_Q6ZG04 Cluster: Putative uncharacterized protein OJ1118... 34 8.5
>UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia
nubilalis|Rep: Reverse transcriptase - Ostrinia
nubilalis (European corn borer)
Length = 497
Score = 161 bits (392), Expect = 3e-38
Identities = 87/148 (58%), Positives = 100/148 (67%)
Frame = -3
Query: 615 SRVGFYLILTFFIYHKNGTETWSL*IEFIRKLKVTQKAMEGGILGVSLXXXXXXXXXXXR 436
S+V +L +Y G+ETWSL + IR+LKVTQ+AME +LGVSL R
Sbjct: 352 SKVFDQCVLPVMVY---GSETWSLTMGLIRRLKVTQRAMERAMLGVSLRDRIRNEEIRRR 408
Query: 435 TKVTDIARRIAKCKW**ASHVIRRTDARWGPWVL**LPCTGRRSVGRLPTRWTDDLVKVA 256
T+VTDIARRIAK KW A H+ RR D RWG VL P GRRSVGR PTRWTDDLVKVA
Sbjct: 409 TRVTDIARRIAKIKWQWAGHIARRADGRWGRKVLEWRPRAGRRSVGRPPTRWTDDLVKVA 468
Query: 255 GVRWIRVAQDRWSWKSLGEIYVQQ*TSF 172
G W++ AQDR WKSLGE +VQQ TSF
Sbjct: 469 GSTWMQAAQDRSLWKSLGEAFVQQWTSF 496
>UniRef50_UPI0000E4800E Cluster: PREDICTED: similar to protein
F28E10.3 [imported] - Caenorhabditis elegans; n=4;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
protein F28E10.3 [imported] - Caenorhabditis elegans -
Strongylocentrotus purpuratus
Length = 824
Score = 70.9 bits (166), Expect = 8e-11
Identities = 42/126 (33%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Frame = -3
Query: 558 ETWSL*IEFIRKLKVTQKAMEGGILGVSLXXXXXXXXXXXRTKVTDIARRIAKCKW**AS 379
ETW+L + RKL +Q ME IL ++ +TKV DI + KW A
Sbjct: 307 ETWTLTSKMERKLAASQHNMERSILSITYKDRKTNKWIREQTKVQDILEAEKRRKWNWAG 366
Query: 378 HVIRRTDARWGPWVL**LPCTGRRSVGRLPTRWTDDLVKVAG-VRWIRVAQDRWSWKSLG 202
H+ RR D RW + P G+R+ GR RW D+L + G W + A +R W
Sbjct: 367 HISRRNDNRWSSAITHWTPYEGKRNRGRQRKRWRDELQQFWGQTNWHQQALNRGIWNHHA 426
Query: 201 EIYVQQ 184
E ++ Q
Sbjct: 427 EAFILQ 432
>UniRef50_Q10126 Cluster: Uncharacterized protein F52C9.6; n=7;
Caenorhabditis elegans|Rep: Uncharacterized protein
F52C9.6 - Caenorhabditis elegans
Length = 279
Score = 52.8 bits (121), Expect = 2e-05
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Frame = -3
Query: 564 GTETWSL*IEFIRKLKVTQKAMEGGILGVSLXXXXXXXXXXXRTKVTDIARR----IAKC 397
G+E W+ ++++T ++E ++G++L +V R + K
Sbjct: 139 GSEAWTFNKALSERVRITHASLERRLVGITLTQQRERDLHREDIRVMSQVRDPLNFVKKR 198
Query: 396 KW**ASHVIRRTDARWGPWVL**LPCTGRRSVGRLPTRWTDDLVKVAGVR---------W 244
K A HV RR D RW + P +R VGR P RWTD L K R W
Sbjct: 199 KLGWAGHVARRKDGRWTTLMTEWRPWNWKRYVGRTPMRWTDSLRKEITTRDADGEVITPW 258
Query: 243 IRVAQDRWSW 214
+A+DR W
Sbjct: 259 STIAKDRKEW 268
>UniRef50_UPI0000E490F6 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=5;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 1030
Score = 39.5 bits (88), Expect = 0.23
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 10/152 (6%)
Frame = -3
Query: 630 SMQTHSRVGFY--LILTFFIYHKNGTETWSL*IEFIRKLKVTQKAMEGGILGVS-LXXXX 460
S+ +H+++ Y LIL+ +Y G E+W++ E +L+V + A I+GV+ L
Sbjct: 868 SISSHTKMQLYQSLILSILLY---GAESWTVKKEDSNRLQVFEMACLRRIMGVTRLDKIR 924
Query: 459 XXXXXXXRTKVTDIARRIAKCKW**ASHVIRRTDARWGPWVL**LPCTGRRSVGRLPTRW 280
D+ +++ + HV+R R+ P + TG R GR P RW
Sbjct: 925 NTHIKESLNLDQDVMDKVSTKRIKYFGHVLRMKPTRY-PKIAVEGKVTGNRPRGRPPKRW 983
Query: 279 TDDLVKVAGVRWI-------RVAQDRWSWKSL 205
D + + R I R+A DR +W ++
Sbjct: 984 LDCISEDCKARSIPRLTDASRLAADRKTWHTI 1015
>UniRef50_A6SHR8 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1714
Score = 37.5 bits (83), Expect = 0.91
Identities = 22/59 (37%), Positives = 27/59 (45%)
Frame = +1
Query: 202 PQRFPRPPVLRHPYPANSRDLHQVVGPPCGEPTHAASSSTRQLLENPWAPSGIGSTNNV 378
P R P P +H P +SR GPP G P H + RQL P P+G+ N V
Sbjct: 1635 PPRAPEHPFSQHGAPMHSRPYGAPHGPPHG-PPHGSPQLNRQLNGLPPPPNGLPPLNGV 1692
>UniRef50_UPI0000DA21AD Cluster: PREDICTED: hypothetical protein;
n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 240
Score = 36.7 bits (81), Expect = 1.6
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +3
Query: 183 TAGHRSPPKISTTTGLAPPVSSELPRPSPGR-RSTLWGAYPRCVFQYT 323
TAG P T PP PRPSPGR R + +P C F+ T
Sbjct: 8 TAGSLRRPPAGATLAAGPPGQPCSPRPSPGRARPRSFAVFPSCTFKKT 55
>UniRef50_Q67UK5 Cluster: Putative uncharacterized protein
P0479H10.30; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0479H10.30 - Oryza sativa subsp. japonica (Rice)
Length = 113
Score = 35.9 bits (79), Expect = 2.8
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -1
Query: 353 DGAHGFSNSCRVLEDAAWVGSPQGGPTTW--*RSREFAGYGWRKTGGRGN 210
DG S+ R AW + QG TTW R+ G+GW++TG N
Sbjct: 40 DGELRQSSMLRARRPPAWAATRQGRSTTWDSEEGRQHGGWGWQRTGAVEN 89
>UniRef50_Q2QUE8 Cluster: HAT family dimerisation domain containing
protein, expressed; n=5; Oryza sativa|Rep: HAT family
dimerisation domain containing protein, expressed -
Oryza sativa subsp. japonica (Rice)
Length = 1189
Score = 35.5 bits (78), Expect = 3.7
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +1
Query: 313 SSTRQLLENPWAPSGIGSTNNVASLLPLTFGNSPGNVGYLGSSTDLLFSASITQ*NSE-D 489
+S +L PW P G G + P TF P N +GS T LL + +E
Sbjct: 641 TSRDMILHRPWDPGG-GRYGKEVTCRPSTFTWYPSNPALIGSPTGLLIRVGLPALTAERG 699
Query: 490 SPLHCFLG 513
+PLH G
Sbjct: 700 APLHSVAG 707
>UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase, partial; n=7;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase, partial -
Strongylocentrotus purpuratus
Length = 787
Score = 34.7 bits (76), Expect = 6.4
Identities = 39/129 (30%), Positives = 51/129 (39%), Gaps = 6/129 (4%)
Frame = -3
Query: 564 GTETWSL*IEFIRKLKVTQKAMEGGILGVSLXXXXXXXXXXXRTKV-TDIARRIAK-C-K 394
G E+W+L KL+V + ILGV L R + + I I K C K
Sbjct: 389 GAESWTLRKSDRNKLEVFEMRCLRTILGVHLMDKIRNEEIRQRLNIPSTICEEITKRCLK 448
Query: 393 W**ASHVIRRTDARWGPWVL**LPCTGRRSVGRLPTRWTDDLVKVAGVRWIRV---AQDR 223
W HV+R R P+ GRR GR P RW D + G+ AQDR
Sbjct: 449 W--FGHVLRMPHHRL-PYQAFQNDFNGRRPRGRPPKRWKDQVQYDVGLSTQEAEQRAQDR 505
Query: 222 WSWKSLGEI 196
W + +
Sbjct: 506 SDWNMISRL 514
>UniRef50_Q6ZG04 Cluster: Putative uncharacterized protein
OJ1118_F05.11; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1118_F05.11 - Oryza sativa subsp. japonica (Rice)
Length = 91
Score = 34.3 bits (75), Expect = 8.5
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 353 DGAHGFSNSCRVLEDAAWVGSPQGGPTTW*RSREFAGYGWRKTGGRGNLW 204
+ G + R+ +AWV SP P TW +S E G G R+ G RG W
Sbjct: 8 NAVRGSWGAARIDSGSAWVPSPLAPPATW-QSGEVLGAGQRE-GPRGMTW 55
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,239,019,568
Number of Sequences: 1657284
Number of extensions: 25474533
Number of successful extensions: 62324
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 57867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62200
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 161311790000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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