Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_D07_e532_07.seq
(1547 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC101377-1|AAI01378.1| 327|Homo sapiens retinaldehyde binding p... 47 2e-04
BC101376-1|AAI01377.1| 327|Homo sapiens retinaldehyde binding p... 47 2e-04
AL591428-2|CAI12306.1| 327|Homo sapiens protein ( to hypothetic... 47 2e-04
BC042617-1|AAH42617.1| 354|Homo sapiens retinaldehyde binding p... 46 5e-04
AY094971-1|AAM15733.1| 354|Homo sapiens cellular retinaldehyde-... 46 5e-04
AL591428-3|CAI12307.1| 181|Homo sapiens protein ( to hypothetic... 44 0.001
Z97053-6|CAI19686.1| 342|Homo sapiens chromosome 20 open readin... 44 0.002
BC003071-1|AAH03071.2| 342|Homo sapiens chromosome 20 open read... 44 0.002
AL132772-9|CAI18861.1| 342|Homo sapiens chromosome 20 open read... 44 0.002
L34219-1|AAA65123.1| 317|Homo sapiens retinaldehyde-binding pro... 42 0.008
J04213-1|AAA60251.1| 317|Homo sapiens RLBP1 protein. 42 0.008
BC004199-1|AAH04199.1| 317|Homo sapiens retinaldehyde binding p... 42 0.008
U21938-1|AAA64309.1| 278|Homo sapiens alpha-tocopherol transfer... 38 0.099
D49488-1|BAA08449.1| 278|Homo sapiens alpha-tocopherol transfer... 38 0.099
BC058000-1|AAH58000.1| 278|Homo sapiens tocopherol (alpha) tran... 38 0.099
>BC101377-1|AAI01378.1| 327|Homo sapiens retinaldehyde binding
protein 1-like 2 protein.
Length = 327
Score = 46.8 bits (106), Expect = 2e-04
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +3
Query: 615 LIHXAAMLE-PESQVRGTVVVMDFHXXGXTQTMXLTPAFSKRLLTXIQDAMPLRLKEXHF 791
L+ AM+E PE QV G V+++D+ Q LTP+ + + +QD+ P R HF
Sbjct: 141 LLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPARFGGIHF 200
Query: 792 VXQP 803
V QP
Sbjct: 201 VNQP 204
>BC101376-1|AAI01377.1| 327|Homo sapiens retinaldehyde binding
protein 1-like 2 protein.
Length = 327
Score = 46.8 bits (106), Expect = 2e-04
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +3
Query: 615 LIHXAAMLE-PESQVRGTVVVMDFHXXGXTQTMXLTPAFSKRLLTXIQDAMPLRLKEXHF 791
L+ AM+E PE QV G V+++D+ Q LTP+ + + +QD+ P R HF
Sbjct: 141 LLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPARFGGIHF 200
Query: 792 VXQP 803
V QP
Sbjct: 201 VNQP 204
>AL591428-2|CAI12306.1| 327|Homo sapiens protein ( to hypothetical
proteins from ).).
Length = 327
Score = 46.8 bits (106), Expect = 2e-04
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +3
Query: 615 LIHXAAMLE-PESQVRGTVVVMDFHXXGXTQTMXLTPAFSKRLLTXIQDAMPLRLKEXHF 791
L+ AM+E PE QV G V+++D+ Q LTP+ + + +QD+ P R HF
Sbjct: 141 LLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPARFGGIHF 200
Query: 792 VXQP 803
V QP
Sbjct: 201 VNQP 204
>BC042617-1|AAH42617.1| 354|Homo sapiens retinaldehyde binding
protein 1-like 1 protein.
Length = 354
Score = 45.6 bits (103), Expect = 5e-04
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +3
Query: 639 EPESQVRGTVVVMDFHXXGXTQTMXLTPAFSKRLLTXIQDAMPLRLKEXHFVXQP 803
+PE Q+ G ++++D+ Q LTP+ K + +QD+ P R HFV QP
Sbjct: 172 DPELQINGFILIIDWSNFSFKQASKLTPSILKLAIEGLQDSFPARFGGVHFVNQP 226
>AY094971-1|AAM15733.1| 354|Homo sapiens cellular
retinaldehyde-binding protein-like protein protein.
Length = 354
Score = 45.6 bits (103), Expect = 5e-04
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +3
Query: 639 EPESQVRGTVVVMDFHXXGXTQTMXLTPAFSKRLLTXIQDAMPLRLKEXHFVXQP 803
+PE Q+ G ++++D+ Q LTP+ K + +QD+ P R HFV QP
Sbjct: 172 DPELQINGFILIIDWSNFSFKQASKLTPSILKLAIEGLQDSFPARFGGVHFVNQP 226
>AL591428-3|CAI12307.1| 181|Homo sapiens protein ( to hypothetical
proteins from ).).
Length = 181
Score = 44.4 bits (100), Expect = 0.001
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 639 EPESQVRGTVVVMDFHXXGXTQTMXLTPAFSKRLLTXIQDAMPLRLKEXHFVXQP 803
+PE QV G V+++D+ Q LTP+ + + +QD+ P R HFV QP
Sbjct: 4 DPELQVNGFVLIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPARFGGIHFVNQP 58
>Z97053-6|CAI19686.1| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +3
Query: 612 YLIHXAAMLEPESQVRGTVVVMDFHXXGXTQTMXLTPAFSKRLLTXIQDAMPLRLKEXHF 791
YL + E+QV G V++ D+ ++ P +K+++ +QD P+R+K H
Sbjct: 166 YLTLEKLIQSEETQVNGIVILADYKGVSLSKASHFGPFIAKKVIGILQDGFPIRIKAVHV 225
Query: 792 VXQPMI 809
V +P I
Sbjct: 226 VNEPRI 231
>BC003071-1|AAH03071.2| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +3
Query: 612 YLIHXAAMLEPESQVRGTVVVMDFHXXGXTQTMXLTPAFSKRLLTXIQDAMPLRLKEXHF 791
YL + E+QV G V++ D+ ++ P +K+++ +QD P+R+K H
Sbjct: 166 YLTLEKLIQSEETQVNGIVILADYKGVSLSKASHFGPFIAKKVIGILQDGFPIRIKAVHV 225
Query: 792 VXQPMI 809
V +P I
Sbjct: 226 VNEPRI 231
>AL132772-9|CAI18861.1| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +3
Query: 612 YLIHXAAMLEPESQVRGTVVVMDFHXXGXTQTMXLTPAFSKRLLTXIQDAMPLRLKEXHF 791
YL + E+QV G V++ D+ ++ P +K+++ +QD P+R+K H
Sbjct: 166 YLTLEKLIQSEETQVNGIVILADYKGVSLSKASHFGPFIAKKVIGILQDGFPIRIKAVHV 225
Query: 792 VXQPMI 809
V +P I
Sbjct: 226 VNEPRI 231
>L34219-1|AAA65123.1| 317|Homo sapiens retinaldehyde-binding
protein protein.
Length = 317
Score = 41.5 bits (93), Expect = 0.008
Identities = 19/76 (25%), Positives = 36/76 (47%)
Frame = +3
Query: 576 QKXTADQXXXLFYLIHXAAMLEPESQVRGTVVVMDFHXXGXTQTMXLTPAFSKRLLTXIQ 755
Q+ T D+ + I + E+Q+ G ++ +F Q L + ++++ +Q
Sbjct: 169 QEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAASLRTSDLRKMVDMLQ 228
Query: 756 DAMPLRLKEXHFVXQP 803
D+ P R K HF+ QP
Sbjct: 229 DSFPARFKAIHFIHQP 244
>J04213-1|AAA60251.1| 317|Homo sapiens RLBP1 protein.
Length = 317
Score = 41.5 bits (93), Expect = 0.008
Identities = 19/76 (25%), Positives = 36/76 (47%)
Frame = +3
Query: 576 QKXTADQXXXLFYLIHXAAMLEPESQVRGTVVVMDFHXXGXTQTMXLTPAFSKRLLTXIQ 755
Q+ T D+ + I + E+Q+ G ++ +F Q L + ++++ +Q
Sbjct: 169 QEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAASLRTSDLRKMVDMLQ 228
Query: 756 DAMPLRLKEXHFVXQP 803
D+ P R K HF+ QP
Sbjct: 229 DSFPARFKAIHFIHQP 244
>BC004199-1|AAH04199.1| 317|Homo sapiens retinaldehyde binding
protein 1 protein.
Length = 317
Score = 41.5 bits (93), Expect = 0.008
Identities = 19/76 (25%), Positives = 36/76 (47%)
Frame = +3
Query: 576 QKXTADQXXXLFYLIHXAAMLEPESQVRGTVVVMDFHXXGXTQTMXLTPAFSKRLLTXIQ 755
Q+ T D+ + I + E+Q+ G ++ +F Q L + ++++ +Q
Sbjct: 169 QEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAASLRTSDLRKMVDMLQ 228
Query: 756 DAMPLRLKEXHFVXQP 803
D+ P R K HF+ QP
Sbjct: 229 DSFPARFKAIHFIHQP 244
>U21938-1|AAA64309.1| 278|Homo sapiens alpha-tocopherol transfer
protein protein.
Length = 278
Score = 37.9 bits (84), Expect = 0.099
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = +3
Query: 639 EPESQVRGTVVVMDFHXXGXTQTMXLTPAFSKRLLTXIQDAMPLRLKEXHFVXQPMI 809
E E+Q G + D + +TP+ +K++ + D+ PL+++ H + +P+I
Sbjct: 146 EVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVI 202
>D49488-1|BAA08449.1| 278|Homo sapiens alpha-tocopherol transfer
protein protein.
Length = 278
Score = 37.9 bits (84), Expect = 0.099
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = +3
Query: 639 EPESQVRGTVVVMDFHXXGXTQTMXLTPAFSKRLLTXIQDAMPLRLKEXHFVXQPMI 809
E E+Q G + D + +TP+ +K++ + D+ PL+++ H + +P+I
Sbjct: 146 EVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVI 202
>BC058000-1|AAH58000.1| 278|Homo sapiens tocopherol (alpha)
transfer protein protein.
Length = 278
Score = 37.9 bits (84), Expect = 0.099
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = +3
Query: 639 EPESQVRGTVVVMDFHXXGXTQTMXLTPAFSKRLLTXIQDAMPLRLKEXHFVXQPMI 809
E E+Q G + D + +TP+ +K++ + D+ PL+++ H + +P+I
Sbjct: 146 EVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVI 202
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,779,548
Number of Sequences: 237096
Number of extensions: 1458802
Number of successful extensions: 974
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 23129454548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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