Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_D04_e508_08.seq
(1574 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 1e-11
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-07
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 1e-06
SB_47132| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 1e-06
SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18) 43 8e-04
SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15) 43 8e-04
SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17) 42 0.001
SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 42 0.001
SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.003
SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16) 39 0.010
SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29) 39 0.010
SB_27164| Best HMM Match : CBM_14 (HMM E-Value=1.1e-05) 39 0.013
SB_59680| Best HMM Match : Extensin_2 (HMM E-Value=1.2) 39 0.013
SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09) 39 0.013
SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15) 38 0.017
SB_44060| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 38 0.022
SB_11375| Best HMM Match : EGF_CA (HMM E-Value=0) 35 0.16
SB_26267| Best HMM Match : TSP_C (HMM E-Value=0) 33 0.47
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 33 0.47
SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14) 33 0.63
SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.63
SB_41624| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.4
SB_25563| Best HMM Match : HEAT (HMM E-Value=2.5e-20) 31 1.9
SB_1728| Best HMM Match : zf-C2H2 (HMM E-Value=0) 30 4.4
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 24 5.5
SB_3108| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.8
SB_4518| Best HMM Match : CBM_14 (HMM E-Value=0.019) 29 7.7
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 68.5 bits (160), Expect = 1e-11
Identities = 42/131 (32%), Positives = 59/131 (45%), Gaps = 11/131 (8%)
Frame = +2
Query: 209 FKCPNKDGQYEDERQCDKFYECVDGVATTKICPDGLVFDPTIRKINKCDQPFNVDCGDRT 388
F DG Y+D C+ F C + + CP+ L F+PT + CD P NV CG T
Sbjct: 442 FCAERSDGDYQDPDACEGFISCSNHITYHMPCPENLRFNPTTK---HCDNPENVQCGP-T 497
Query: 389 ELQPPK--PNSQCP---------RRNGFFAHPDTSVCNIFFNCIEGDATEVKCTAGLHFD 535
PK P ++ P ++NG +A D + CN F C G + C + L +D
Sbjct: 498 RPPTPKVPPTTKAPFTKSPFCVGKQNGKYA--DANNCNGFVMCSNGYIYYMDCPSNLRYD 555
Query: 536 EYSGTCVWPDS 568
G C W D+
Sbjct: 556 PAKGRCEWADT 566
Score = 67.3 bits (157), Expect = 3e-11
Identities = 44/143 (30%), Positives = 60/143 (41%), Gaps = 14/143 (9%)
Frame = +2
Query: 179 TAVAALASAQFKCPNKDGQYEDERQCDKFYECVDGVATTKICPDGLVFDPTIRKINKCDQ 358
T A + F ++G+Y D C+ F C +G CP L +DP +C+
Sbjct: 507 TTKAPFTKSPFCVGKQNGKYADANNCNGFVMCSNGYIYYMDCPSNLRYDPA---KGRCEW 563
Query: 359 PFNVDCGDRTEL--QPPKPNSQCP------------RRNGFFAHPDTSVCNIFFNCIEGD 496
VDCG R + PPKP + P ++NG +A P S CN F C G
Sbjct: 564 ADTVDCGQRPTISPHPPKPTTMPPQPTPPKSPFCEEKKNGDYADP--SNCNGFITCSNGY 621
Query: 497 ATEVKCTAGLHFDEYSGTCVWPD 565
A + C L FD C WP+
Sbjct: 622 AYKRDCPFNLKFDTKKLECEWPN 644
Score = 56.8 bits (131), Expect = 4e-08
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Frame = +2
Query: 224 KDGQYEDERQCDKFYECVDGVATTKICPDGLVFDPTIRKINKCDQPFNVDCGDR------ 385
K+G Y D C+ F C +G A + CP L FD +K+ +C+ P V+C R
Sbjct: 601 KNGDYADPSNCNGFITCSNGYAYKRDCPFNLKFDT--KKL-ECEWPNKVNCKSRPTTVPY 657
Query: 386 -TELQPPKPNSQCPRRNGFFAHPDTSVCNIFFNCIEGDATEVKCTAGLHFDEYSGTCVWP 562
T+ PP NS+ ++NG + D C + C G+ C GL F+ + C P
Sbjct: 658 VTKPTPPSGNSEFCKKNGNGRYRDPHNCLGYIVCRGGNIYFRNCRRGLRFNGVTKRCDLP 717
Score = 49.6 bits (113), Expect = 7e-06
Identities = 46/180 (25%), Positives = 66/180 (36%), Gaps = 2/180 (1%)
Frame = +2
Query: 194 LASAQFKCPNKDGQYEDERQCDKFYECVDG-VATTKICPDGLVFDPTIRKINKCDQPFNV 370
L + F +DG Y D C+ + C +G + CP GL F+ I CD P NV
Sbjct: 310 LVDSNFCTERQDGNYADSSNCNLYITCSNGFTIANRHCPTGLAFN---EAIGMCDYPSNV 366
Query: 371 -DCGDRTELQPPKPNSQCPRRNGFFAHPDTSVCNIFFNCIEGDATEVKCTAGLHFDEYSG 547
C + + C ++ + D+ C+ F C G + C +FD
Sbjct: 367 PGCSGSS------GSGFCHEKSD-GNYKDSGNCHGFIMCSNGHTYHMTCPGQTNFDPAKK 419
Query: 548 TCVWPDSAGRQGCVEQEKKTKDGFECPKEQQVDAQGLAIAHPKFPHPNDCQRFYVCLNGI 727
C D +GR V DG C + D Q P+ C+ F C N I
Sbjct: 420 RCEDYDCSGRD--VAYLTDQNDGGFCAERSDGDYQ----------DPDACEGFISCSNHI 467
Score = 46.8 bits (106), Expect = 5e-05
Identities = 43/174 (24%), Positives = 63/174 (36%), Gaps = 4/174 (2%)
Frame = +2
Query: 215 CPNK-DGQYEDERQCDKFYECVDGVATTKICPDGLVFDPTIRKINKCDQPFNVDCGDR-- 385
C K DG Y+D C F C +G CP FDP + +C+ + DC R
Sbjct: 378 CHEKSDGNYKDSGNCHGFIMCSNGHTYHMTCPGQTNFDPAKK---RCE---DYDCSGRDV 431
Query: 386 TELQPPKPNSQCPRR-NGFFAHPDTSVCNIFFNCIEGDATEVKCTAGLHFDEYSGTCVWP 562
L C R +G + PD C F +C + C L F+ + C P
Sbjct: 432 AYLTDQNDGGFCAERSDGDYQDPD--ACEGFISCSNHITYHMPCPENLRFNPTTKHCDNP 489
Query: 563 DSAGRQGCVEQEKKTKDGFECPKEQQVDAQGLAIAHPKFPHPNDCQRFYVCLNG 724
++ K + P + G + K+ N+C F +C NG
Sbjct: 490 ENVQCGPTRPPTPKVPPTTKAPFTKSPFCVGK--QNGKYADANNCNGFVMCSNG 541
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 49.6 bits (113), Expect = 7e-06
Identities = 30/72 (41%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +2
Query: 215 CPNK-DGQYEDERQCDKFYEC-VDGVATTKICPDGLVFDPTIRKINKCDQPFNVDCGDRT 388
C +K +G Y D R C KFY+C A CP GL + +++K CD P VDC DRT
Sbjct: 888 CKDKPNGHYADPRDCSKFYQCDAFHRAFLHRCPAGLKW--SVKK-TACDWPRYVDC-DRT 943
Query: 389 ELQPPKPNSQCP 424
PP P + P
Sbjct: 944 TSTPPTPTTHTP 955
Score = 48.0 bits (109), Expect(2) = 3e-07
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Frame = +2
Query: 215 CPNK-DGQYEDERQCDKFYECVDGVATTKI--CPDGLVFDPTIRKINKCDQPFNVDCGDR 385
C +K +G Y D R C +FY+C D T + CP GL + +++K CD P VDC DR
Sbjct: 1138 CKDKPNGHYADPRDCSRFYQC-DAFHKTFLHRCPAGLKW--SVKK-TACDWPRYVDC-DR 1192
Query: 386 TELQPPKPNSQ 418
T PP P ++
Sbjct: 1193 TTSTPPTPTTK 1203
Score = 47.2 bits (107), Expect(2) = 6e-07
Identities = 36/116 (31%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Frame = +2
Query: 215 CPNK-DGQYEDERQCDKFYEC-VDGVATTKICPDGLVFDPTIRKINKCDQPFNVDCGDRT 388
C K +G Y D R C +FY+C A CP GL + +++K CD P VDC DRT
Sbjct: 1238 CKEKPNGHYADPRDCSRFYQCDAFHRAFLHRCPAGLKW--SVKK-TACDWPRYVDC-DRT 1293
Query: 389 ELQPPKPNSQCPRRNGFFAHPDTSVCNIFFNCIEGDATEVKCTAGLHFDEYSGTCV 556
PP P P C++ + D + CT ++ +G CV
Sbjct: 1294 TSTPPTPTPLTPTTK--------PACDLHCQTLNPDGS---CTVAPGYEVVNGMCV 1338
Score = 43.2 bits (97), Expect = 6e-04
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +2
Query: 230 GQYEDERQCDKFYECVDGVATTKI--CPDGLVFDPTIRKINKCDQPFNVDCGDRT 388
G Y D R C +FY+C D T + CPDGL + +++K CD P VDC DRT
Sbjct: 1349 GHYADPRDCSRFYQC-DASHKTFLHRCPDGLKW--SVKK-TACDLPLYVDC-DRT 1398
Score = 42.7 bits (96), Expect(2) = 1e-05
Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +2
Query: 215 CPNK-DGQYEDERQCDKFYEC-VDGVATTKICPDGLVFDPTIRKINKCDQPFNVDCGDRT 388
C +K +G Y D R C +FY+C A C GL + +I K CD P NVDC +T
Sbjct: 783 CKDKPNGYYADPRDCSRFYQCDAFHRAFLHRCSPGLKW--SITK-TTCDWPRNVDCDRKT 839
Query: 389 ELQP-PKPNSQCPR 427
P P P + P+
Sbjct: 840 PTPPSPTPPTTTPK 853
Score = 41.1 bits (92), Expect = 0.002
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +2
Query: 215 CPNKDGQY-EDERQCDKFYEC-VDGVATTKICPDGLVFDPTIRKINKCDQPFNVDC 376
C +K Y D R C + Y+C + A K CP GL ++ I K N CD P NV+C
Sbjct: 1454 CKDKTSDYYHDPRNCSRLYQCDIFHRAFLKSCPHGLKWN--IEK-NACDHPVNVNC 1506
Score = 38.7 bits (86), Expect = 0.013
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +2
Query: 215 CPNK-DGQYEDERQCDKFYEC-VDGVATTKICPDGLVFDPTIRKINKCDQPFNVDCGDRT 388
C +K +G Y D C +FY+C A CP GL + +++K CD P VDC DRT
Sbjct: 993 CKDKPNGHYADPMDCSRFYQCDAFHRAFLHRCPAGLKW--SVKK-TTCDWPRYVDC-DRT 1048
Query: 389 ELQPPKPNSQCP 424
P P
Sbjct: 1049 PTTSGTPTKPIP 1060
Score = 34.7 bits (76), Expect = 0.21
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 230 GQYEDERQCDKFYECVDGV-ATTKICPDGLVFDPTIRKINKCDQPFNVDCGDRT 388
G Y D + C +FY C + CP GL++ ++K CD P VDC T
Sbjct: 574 GYYADPKDCAQFYFCYGSAESLLSRCPRGLLWS-VVKK--TCDYPHLVDCSRPT 624
Score = 30.7 bits (66), Expect = 3.3
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 215 CPNKDGQYEDERQCDKFYECVDGV--ATTKICPDGLVFDPTIRKINKCD 355
C +K + D R C K+Y C DG + CP G +++ +K ++ D
Sbjct: 68 CVDKCHDFADPRDCFKYYHC-DGYDDVRWRSCPTGQLWNHVNKKCDRAD 115
Score = 25.4 bits (53), Expect(2) = 1e-05
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +2
Query: 431 NGFFAHPDTSVCNIFFNCIEGDATEV-KCTAGLHFDEYSGTCVWP 562
NG +A P C+ F+ C + +C AGL + C WP
Sbjct: 893 NGHYADPRD--CSKFYQCDAFHRAFLHRCPAGLKWSVKKTACDWP 935
Score = 25.4 bits (53), Expect(2) = 3e-07
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +2
Query: 431 NGFFAHPDTSVCNIFFNCIEGDATEV-KCTAGLHFDEYSGTCVWP 562
NG +A P C+ F+ C + +C AGL + C WP
Sbjct: 1243 NGHYADPRD--CSRFYQCDAFHRAFLHRCPAGLKWSVKKTACDWP 1285
Score = 25.4 bits (53), Expect(2) = 6e-07
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 668 HPKFPHPNDCQRFYVC 715
H + P DC RFY C
Sbjct: 1348 HGHYADPRDCSRFYQC 1363
>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 52.4 bits (120), Expect = 1e-06
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 215 CPNK-DGQYEDERQCDKFYECVDGVATTKICPDGLVFDPTIRKINKCDQPFNVDC 376
C K DG Y D + C +Y+C G + K CPDGL F+ I+ CD+P V+C
Sbjct: 228 CAGKTDGTYADPKDCSAYYQCKKGRSFKKFCPDGLKFNALIK---SCDEPSKVNC 279
>SB_47132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 52.4 bits (120), Expect = 1e-06
Identities = 35/128 (27%), Positives = 52/128 (40%), Gaps = 1/128 (0%)
Frame = +2
Query: 191 ALASAQFKCPNKD-GQYEDERQCDKFYECVDGVATTKICPDGLVFDPTIRKINKCDQPFN 367
++ S +F C K G Y D +C F C T + CP G + T + C P
Sbjct: 103 SIGSLEF-CEGKPFGNYADTARCAGFISCASNGMTRQACPSGTQWQTTGPGVGICTCPSL 161
Query: 368 VDCGDRTELQPPKPNSQCPRRNGFFAHPDTSVCNIFFNCIEGDATEVKCTAGLHFDEYSG 547
DCG + C R +PDTS C+ + +C+ G + C AG +
Sbjct: 162 SDCGS-------ADGNFC-RGKADGDYPDTSRCDGYVSCVSGYIYYMPCPAGTQWKNAED 213
Query: 548 TCVWPDSA 571
CV P ++
Sbjct: 214 ACVDPSAS 221
>SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18)
Length = 123
Score = 42.7 bits (96), Expect = 8e-04
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 410 NSQCPRR-NGFFAHPDTSVCNIFFNCIEGDATEVKCTAGLHFDEYSGTCVWPDSA 571
NS C +R NG +AHP+ C ++ C E +C AGL++++ C WP +A
Sbjct: 59 NSFCKKRANGDYAHPEN--CKMYITCSNKITYERQCPAGLNWNDAKKWCDWPKNA 111
>SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15)
Length = 220
Score = 42.7 bits (96), Expect = 8e-04
Identities = 27/79 (34%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +2
Query: 170 IVLTAVAALASAQFKCPNKDGQYEDERQCDKFYEC-VDGVATTKICPDGLVFDPTIRKIN 346
IV +VA A + +G Y D R C +FY+C A CP GL + T
Sbjct: 8 IVCFSVALATDATYCLSLPNGHYHDPRNCSRFYQCDAFHKAFLHSCPSGLKWSVT---KT 64
Query: 347 KCDQPFNVDCGDRTELQPP 403
CD P VDC +PP
Sbjct: 65 TCDWPRYVDCDIGGAYKPP 83
>SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17)
Length = 225
Score = 42.3 bits (95), Expect = 0.001
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +2
Query: 425 RRNGFFAHPDTSVCNIFFNCIEGDATEVKCTAGLHFDEYSGTCVWPDSAGRQG 583
R +G + HPD C ++ C G A E+ C AGL++++ C WP +A +G
Sbjct: 89 RADGNYPHPD--FCKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWPFNAPCEG 139
Score = 36.7 bits (81), Expect = 0.051
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 215 CPNK-DGQYEDERQCDKFYECVDGVATTKICPDGLVFDPTIRKINKCDQPFNVDC 376
C N+ DG Y C + C +G+A CP GL ++ + CD PFN C
Sbjct: 86 CKNRADGNYPHPDFCKMYIACSNGIAYEMPCPAGLNWND---EKKYCDWPFNAPC 137
>SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 155
Score = 42.3 bits (95), Expect = 0.001
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Frame = +2
Query: 158 MKVFIVLTAVAALASAQFK--CPNKD-GQYEDERQCDKFYECVDGVAT-TKICPDGLVFD 325
MK ++L A ++A A C +D G Y D + C K+Y+C D T + C D L +
Sbjct: 50 MKSLVLLIACFSVARATEDDFCKERDAGCYVDLKDCSKYYQCDDFHKTHHRTCSDQLKWS 109
Query: 326 PTIRKINKCDQPFNVDCGDRTELQPPKPN 412
++ I CD +VDC DR L+P P+
Sbjct: 110 -AVKNI--CDHAADVDC-DRKPLKPRVPD 134
>SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 40.7 bits (91), Expect = 0.003
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 227 DGQYEDERQ-CDKFYECVDGVATTKICPDGLVFDPTIRKINKCDQPFNVDC 376
DG+Y D C F C + A+ K CP GL+++ K +CD P NVDC
Sbjct: 81 DGEYRDPYDACRGFIHCHNYNASYKPCPGGLLYN---EKTKQCDWPRNVDC 128
>SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16)
Length = 518
Score = 39.1 bits (87), Expect = 0.010
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +2
Query: 221 NKDGQYEDERQCDKFYECVDGVATTKICPDGLVFDPTIRKINKCDQPFNVDC 376
N DG Y ++ C F C G+A K CP GL+F+ + CD V C
Sbjct: 461 NGDGIYAEKENCYGFVLCGGGIAHKKTCPPGLIFNTDLM---VCDWSHEVKC 509
>SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)
Length = 339
Score = 39.1 bits (87), Expect = 0.010
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = +2
Query: 158 MKVFIVLTAVAALASAQFK--CPNKD-GQYEDERQCDKFYECVDGVAT-TKICPDGLVFD 325
MK ++L A ++A A C +D G Y D + C K+Y+C D T + C + L +
Sbjct: 1 MKSLVLLIACFSVARATEDDYCKERDAGCYVDLKDCSKYYQCDDFHKTHHRTCSEQLKWS 60
Query: 326 PTIRKINKCDQPFNVDCGDRTELQP 400
++ I CD +VDC DR L+P
Sbjct: 61 -AVKNI--CDHAADVDC-DRKPLKP 81
Score = 39.1 bits (87), Expect = 0.010
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 227 DGQYEDERQCDKFYEC-VDGVATTKICPDGLVFDPTIRKINKCDQPFNVDCGDRTELQPP 403
+G Y D R C +FY+C A CP GL + T CD P VDC +PP
Sbjct: 120 NGHYHDPRNCSRFYQCDAFHKAFLHSCPSGLKWSVT---KTTCDWPRYVDCDIGGAYKPP 176
>SB_27164| Best HMM Match : CBM_14 (HMM E-Value=1.1e-05)
Length = 85
Score = 38.7 bits (86), Expect = 0.013
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +2
Query: 158 MKVFIVLTAV--AALASAQFKCPNKD-GQYEDERQCDKFYECVDGVATT--KICPDGLVF 322
MK ++L A LA+ C KD G Y D C KFY+C DG T ++C D V
Sbjct: 8 MKNLVLLIACFSVGLANDDDFCKEKDAGHYTDPADCAKFYQC-DGFHRTFHRMCSD--VP 64
Query: 323 DPTIRKINKCDQPFNVDC 376
++ K + CD NVDC
Sbjct: 65 KWSVMK-STCDHAKNVDC 81
>SB_59680| Best HMM Match : Extensin_2 (HMM E-Value=1.2)
Length = 412
Score = 38.7 bits (86), Expect = 0.013
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = -3
Query: 666 AMASPWASTCCSLGHSKPSLVFFSCSTQPCLPAESGQTQVPEYSSKWRPAVHFTSVASPS 487
AMASP+AS S S + + S + PC+P + Q P +S+ RPA +P+
Sbjct: 15 AMASPYASAMASPYASAMASPYASAMSAPCVPTPANPCQTPAAASQARPAPGRAPARNPA 74
Query: 486 MQ 481
Q
Sbjct: 75 QQ 76
>SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09)
Length = 98
Score = 38.7 bits (86), Expect = 0.013
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = +2
Query: 200 SAQFKCPNKDGQYEDERQCDKFYECVDGVATTKICPDGLVFDPTIRKINKCDQP 361
S+ F G Y DE+ KF C +GV + C GLVF+P K C+QP
Sbjct: 3 SSNFCKVKTSGVYADEKNPSKFVICYNGVREERECAKGLVFNP---KEKICEQP 53
>SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15)
Length = 134
Score = 38.3 bits (85), Expect = 0.017
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +2
Query: 158 MKVFIVLTAVAALASAQFK--CPNKD-GQY-EDERQCDKFYECVDGVATTKICPDGLVFD 325
MK+ I + A A L ++ C +K G Y D C +Y C G A K C G V+D
Sbjct: 1 MKIVIYVLAFAGLVASVHADLCADKPHGAYLPDSTSCQHYYHCTWGKAVRKDCGPGRVWD 60
Query: 326 PTIRKIN 346
P I N
Sbjct: 61 PRITNCN 67
>SB_44060| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 64
Score = 37.9 bits (84), Expect = 0.022
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 215 CPNKD-GQYEDERQCDKFYECVDGVAT-TKICPDGLVFDPTIRKINKCDQPFNVDCGDRT 388
C +D G Y D + C K+Y+C D T + C D L + ++ I CD +VDC DR
Sbjct: 4 CKERDAGCYVDLKDCSKYYQCDDFHKTHHRTCSDQLKWS-AVKNI--CDHAADVDC-DRK 59
Query: 389 ELQP 400
L+P
Sbjct: 60 PLKP 63
>SB_11375| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 651
Score = 35.1 bits (77), Expect = 0.16
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 329 TIRKINKCDQ--PFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDTSVCNIFFNCIEGDAT 502
T R I++C++ ++ CG R P N C +GF PD CN C++ +
Sbjct: 180 TCRDIDECEELKKTSLSCGQRCLNFPGGYNCTC--NSGFILIPDNRTCNDTDECLDSNTC 237
Query: 503 EVKCT 517
+ CT
Sbjct: 238 QQTCT 242
>SB_26267| Best HMM Match : TSP_C (HMM E-Value=0)
Length = 2996
Score = 33.5 bits (73), Expect = 0.47
Identities = 34/122 (27%), Positives = 46/122 (37%), Gaps = 2/122 (1%)
Frame = +2
Query: 365 NVDCGDRTELQPPKPNSQCPRRNGFFAHPDTSVCNIFFNCIEGDATEVKCTAGLHFDEYS 544
N G+ P NS+ P+ + P C + C GD TE KC G++ EYS
Sbjct: 1401 NAGSGEVFFRAPSMTNSEYPKNST--EKPMCRRCQTGYYC-PGDGTETKCALGVNTTEYS 1457
Query: 545 GTCVWPDSAGRQGCVEQEKKTKDGF--ECPKEQQVDAQGLAIAHPKFPHPNDCQRFYVCL 718
SA +G + KDGF CP V +P C++ VC
Sbjct: 1458 FGGAVRCSACPEGWL-----CKDGFALPCPPNTYVKCNSTWCPDNCYP----CEKGTVCF 1508
Query: 719 NG 724
G
Sbjct: 1509 EG 1510
Score = 31.1 bits (67), Expect = 2.5
Identities = 31/106 (29%), Positives = 42/106 (39%), Gaps = 2/106 (1%)
Frame = +2
Query: 338 KINKCDQPFNVDCGDRTE-LQPPKPNSQCPRRN-GFFAHPDTSVCNIFFNCIEGDATEVK 511
+IN+C + C ++ L P + C N GF H T C GD
Sbjct: 1724 EINECAEG-TASCDPNSQCLNTPLGSYTCGFCNPGFIGHGTTG-------CSPGDL---- 1771
Query: 512 CTAGLHFDEYSGTCVWPDSAGRQGCVEQEKKTKDGFECPKEQQVDA 649
CT G H TC +AG+ CV + +G EC +Q DA
Sbjct: 1772 CTNGTHTCHADATCT-QTAAGKYKCVCKNGFGGNGEECNPDQDFDA 1816
>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
Length = 3810
Score = 33.5 bits (73), Expect = 0.47
Identities = 35/156 (22%), Positives = 56/156 (35%), Gaps = 8/156 (5%)
Frame = +2
Query: 209 FKCPNKDGQYEDERQCDKFYECVDGVATTKICPDGLVFDPTIRKI----NKCDQPFN-VD 373
+ CP + + E +C C+ G + ++CP G T R C + + +
Sbjct: 1198 YYCPPRSSSSK-EIECPSGTYCIGGNSEPELCPIGTYQPNTGRTALADCTSCTEGYYCMT 1256
Query: 374 CGDRTELQPPKPNSQCPRRNGFFAHPDTSVCNIFFNCIEGDATEVKCTAGLHFDEYSGTC 553
G P K CP + P C I F+C EG + C+AG + ++ SG
Sbjct: 1257 RGLSNATAPCKAGWYCPTGSSV---PTPRECPIGFHCPEGSSLPKPCSAGFYTNK-SGAA 1312
Query: 554 VWPDSAGRQGCVEQEKKTKDG---FECPKEQQVDAQ 652
C + + F CP+ AQ
Sbjct: 1313 ACDICPASYFCTPLDLSRNESVGFFPCPRGFYCPAQ 1348
>SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14)
Length = 480
Score = 33.1 bits (72), Expect = 0.63
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 215 CPNK-DGQYEDERQCDKFYECVDGVATTKICPDGL 316
C +K DG Y +CD + C +G+A CP GL
Sbjct: 336 CQDKADGNYAHPSKCDMYITCSNGIAHEMPCPAGL 370
>SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2641
Score = 33.1 bits (72), Expect = 0.63
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +2
Query: 191 ALASAQFKCPNKDGQYEDERQCDKFYECVDGVATTKICPDGLVFDPTIR 337
A+ S+Q+ CP DG + D ++ C CPD + + I+
Sbjct: 2171 AILSSQYDCPTSDGFFPDPASNGRYIHCSGNSPEIMSCPDKMTWQNDIK 2219
>SB_41624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 917
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 191 ALASAQFKCPNKDGQYEDERQCDKFYECVDGVATTKICPDGLVFD 325
+LA + C + DG + D + CV GV C DGLV++
Sbjct: 164 SLAILESYCKSPDGMFADPYNEAGYIHCVSGVGKRVNCGDGLVWE 208
>SB_25563| Best HMM Match : HEAT (HMM E-Value=2.5e-20)
Length = 1803
Score = 31.5 bits (68), Expect = 1.9
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 215 CPNKDGQYEDERQCDKFYECVDGVATTKI--CPDGLVFDPTIRKINKCD 355
C +K + D + C K+Y C DG ++ CP G +++ +K ++ D
Sbjct: 1492 CVDKCHDFADPKDCSKYYHC-DGYDDGRLRSCPTGQLWNHVNKKCDRAD 1539
>SB_1728| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 935
Score = 30.3 bits (65), Expect = 4.4
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 771 EESQKCDAPETVRG--CEDWYKDSEEAGQDLSEILNVLSD 884
EES+ CD P V+G C+D K E G D ++ L D
Sbjct: 503 EESELCDDPPKVKGELCDDTPKVDNELGNDPPKVEGELCD 542
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 24.2 bits (50), Expect(2) = 5.5
Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +2
Query: 200 SAQFKCP-NKDGQYEDERQCDKFYECVDGVATTKICPDG 313
S + CP + Q ++QC + C +G + CP G
Sbjct: 1346 SEGYYCPAGETKQSPPDKQCQPGHYCPEGSGLHRPCPPG 1384
Score = 23.8 bits (49), Expect(2) = 5.5
Identities = 15/51 (29%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = +2
Query: 302 CPDGLVFDPTIRKINKCDQPFNVDCGDRTELQPPKPNSQCPRRNGFFA-HP 451
CP G+ DP ++N NV G T P CP + + HP
Sbjct: 1398 CPPGMYCDPNEARVNFSCSSVNVSHGTITPSDCP-AGFYCPNETEWASQHP 1447
>SB_3108| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 631
Score = 29.9 bits (64), Expect = 5.8
Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 5/144 (3%)
Frame = +2
Query: 209 FKCPNKDGQYEDERQCDKFYECVDGVATTKICPDGLVFDPTIRKIN-KCDQPFNVDCGDR 385
+ C G D R+C ECV G T C + + TI + +C+ F+ D +
Sbjct: 179 YHCMCNPGFSGDGRECTDIDECVTGDHT---CDKNAICNNTIGSYHCRCNPGFSGDGRNC 235
Query: 386 TELQPPKPNSQCPRRNGFFAHPDTS---VCNIFFNCIEGDATEV-KCTAGLHFDEYSGTC 553
T++ +N + S +CN F+ + T++ +C G H + + C
Sbjct: 236 TDIDECATGDHICDKNAKCNNTIGSYHCMCNPGFSGDGRNCTDIDECVTGDHTCDKNAKC 295
Query: 554 VWPDSAGRQGCVEQEKKTKDGFEC 625
++ G C+ + DG EC
Sbjct: 296 --NNTIGSYHCMCNPGFSGDGREC 317
>SB_4518| Best HMM Match : CBM_14 (HMM E-Value=0.019)
Length = 86
Score = 29.5 bits (63), Expect = 7.7
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +2
Query: 194 LASAQFKCPNKDGQYEDERQCDKFYECVDGVATTKICPDGLVFDPTI 334
LA+ Q+ DG+Y + F C G+ CP G FD +
Sbjct: 36 LAAYQYCATRPDGRYPAQPSTRGFIVCSKGMTKHVDCPQGQTFDSNL 82
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,284,297
Number of Sequences: 59808
Number of extensions: 780629
Number of successful extensions: 4930
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 4509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4875
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 5152884103
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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