Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_D03_e500_07.seq
         (1571 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   4.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   4.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   4.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   4.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   8.2  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 262 CICFYPGQRGVCEHSSQ 212
           CICF PG  G+   S++
Sbjct: 203 CICFVPGVLGLLSRSNK 219


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 262 CICFYPGQRGVCEHSSQ 212
           CICF PG  G+   S++
Sbjct: 203 CICFVPGVLGLLSRSNK 219


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 262 CICFYPGQRGVCEHSSQ 212
           CICF PG  G+   S++
Sbjct: 203 CICFVPGVLGLLSRSNK 219


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 262 CICFYPGQRGVCEHSSQ 212
           CICF PG  G+   S++
Sbjct: 203 CICFVPGVLGLLSRSNK 219


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 440  CWQEDCCRGSA 472
            CWQ DC +G A
Sbjct: 1949 CWQVDCNKGPA 1959


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 238,321
Number of Sequences: 336
Number of extensions: 4497
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 47422775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)