Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_D03_e500_07.seq
(1571 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 307 7e-83
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 305 4e-82
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 305 4e-82
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 305 4e-82
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 305 4e-82
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 305 4e-82
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 303 1e-81
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 191 5e-48
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 190 9e-48
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 54 1e-06
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 307 bits (754), Expect = 7e-83
Identities = 136/185 (73%), Positives = 155/185 (83%)
Frame = +1
Query: 118 IF*KMGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRXS 297
+F +MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR +
Sbjct: 4 LFRRMGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVT 63
Query: 298 NKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXD 477
N+D+ CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG D
Sbjct: 64 NRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMD 123
Query: 478 SLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAXDGGLNVPHS 657
+Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGA DGGL++PHS
Sbjct: 124 KIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHS 183
Query: 658 IKRFP 672
KRFP
Sbjct: 184 TKRFP 188
Score = 35.5 bits (78), Expect = 0.53
Identities = 23/76 (30%), Positives = 31/76 (40%)
Frame = +3
Query: 693 RNFNAXVHXAHIFGLPVAEYMRTLAXXRRXFFPETVWXSXFKNRXKSXMIFEXNFXKXHE 872
+ FNA VH HI G VA+YMR L + + + KN M E + K H
Sbjct: 195 KEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQ-FSQYIKNSVTPDM--EEMYKKAHA 251
Query: 873 XXSXXPXPXKXDKRRI 920
P K K+ +
Sbjct: 252 AIRENPVYEKKPKKEV 267
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 305 bits (748), Expect = 4e-82
Identities = 135/181 (74%), Positives = 152/181 (83%)
Frame = +1
Query: 130 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRXSNKDV 309
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR +N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 310 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 489
CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG D +Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 490 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAXDGGLNVPHSIKRF 669
G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGA DGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 670 P 672
P
Sbjct: 181 P 181
Score = 36.7 bits (81), Expect = 0.23
Identities = 23/76 (30%), Positives = 32/76 (42%)
Frame = +3
Query: 693 RNFNAXVHXAHIFGLPVAEYMRTLAXXRRXFFPETVWXSXFKNRXKSXMIFEXNFXKXHE 872
+ FNA VH HI G VA+YMR L + + + KN M+ E + K H
Sbjct: 188 KEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQ-FSQYIKNSVTPDMM-EEMYKKAHA 245
Query: 873 XXSXXPXPXKXDKRRI 920
P K K+ +
Sbjct: 246 AIRENPVYEKKPKKEV 261
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 305 bits (748), Expect = 4e-82
Identities = 135/181 (74%), Positives = 152/181 (83%)
Frame = +1
Query: 130 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRXSNKDV 309
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR +N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 310 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 489
CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG D +Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 490 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAXDGGLNVPHSIKRF 669
G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGA DGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 670 P 672
P
Sbjct: 181 P 181
Score = 36.7 bits (81), Expect = 0.23
Identities = 23/76 (30%), Positives = 32/76 (42%)
Frame = +3
Query: 693 RNFNAXVHXAHIFGLPVAEYMRTLAXXRRXFFPETVWXSXFKNRXKSXMIFEXNFXKXHE 872
+ FNA VH HI G VA+YMR L + + + KN M+ E + K H
Sbjct: 188 KEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQ-FSQYIKNSVTPDMM-EEMYKKAHA 245
Query: 873 XXSXXPXPXKXDKRRI 920
P K K+ +
Sbjct: 246 AIRENPVYEKKPKKEV 261
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 305 bits (748), Expect = 4e-82
Identities = 135/181 (74%), Positives = 152/181 (83%)
Frame = +1
Query: 130 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRXSNKDV 309
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR +N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 310 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 489
CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG D +Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 490 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAXDGGLNVPHSIKRF 669
G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGA DGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 670 P 672
P
Sbjct: 181 P 181
Score = 37.1 bits (82), Expect = 0.17
Identities = 23/76 (30%), Positives = 32/76 (42%)
Frame = +3
Query: 693 RNFNAXVHXAHIFGLPVAEYMRTLAXXRRXFFPETVWXSXFKNRXKSXMIFEXNFXKXHE 872
+ FNA VH HI G VA+YMR L + + + KN M+ E + K H
Sbjct: 188 KEFNAEVHRKHIMGQNVADYMRCLMEEDEDAYKKQ-FSQYIKNSVTPDMM-EEMYKKAHA 245
Query: 873 XXSXXPXPXKXDKRRI 920
P K K+ +
Sbjct: 246 AIRENPVYEKKPKKEV 261
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 305 bits (748), Expect = 4e-82
Identities = 135/181 (74%), Positives = 152/181 (83%)
Frame = +1
Query: 130 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRXSNKDV 309
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR +N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 310 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 489
CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG D +Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 490 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAXDGGLNVPHSIKRF 669
G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGA DGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 670 P 672
P
Sbjct: 181 P 181
Score = 36.7 bits (81), Expect = 0.23
Identities = 23/76 (30%), Positives = 32/76 (42%)
Frame = +3
Query: 693 RNFNAXVHXAHIFGLPVAEYMRTLAXXRRXFFPETVWXSXFKNRXKSXMIFEXNFXKXHE 872
+ FNA VH HI G VA+YMR L + + + KN M+ E + K H
Sbjct: 188 KEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQ-FSQYIKNSVTPDMM-EEMYKKAHA 245
Query: 873 XXSXXPXPXKXDKRRI 920
P K K+ +
Sbjct: 246 AIRENPVYEKKPKKEV 261
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 305 bits (748), Expect = 4e-82
Identities = 135/181 (74%), Positives = 152/181 (83%)
Frame = +1
Query: 130 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRXSNKDV 309
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR +N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 310 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 489
CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG D +Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 490 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAXDGGLNVPHSIKRF 669
G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGA DGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 670 P 672
P
Sbjct: 181 P 181
Score = 36.7 bits (81), Expect = 0.23
Identities = 23/76 (30%), Positives = 32/76 (42%)
Frame = +3
Query: 693 RNFNAXVHXAHIFGLPVAEYMRTLAXXRRXFFPETVWXSXFKNRXKSXMIFEXNFXKXHE 872
+ FNA VH HI G VA+YMR L + + + KN M+ E + K H
Sbjct: 188 KEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQ-FSQYIKNSVTPDMM-EEMYKKAHA 245
Query: 873 XXSXXPXPXKXDKRRI 920
P K K+ +
Sbjct: 246 AIRENPVYEKKPKKEV 261
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 303 bits (743), Expect = 1e-81
Identities = 134/181 (74%), Positives = 151/181 (83%)
Frame = +1
Query: 130 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRXSNKDV 309
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR +N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 310 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 489
CQ+AY+RIEGD IVCA Y+HELP+YG+KVGLTNYAAAYCTG D +Y
Sbjct: 61 ICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 490 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAXDGGLNVPHSIKRF 669
G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGA DGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 670 P 672
P
Sbjct: 181 P 181
Score = 36.7 bits (81), Expect = 0.23
Identities = 23/76 (30%), Positives = 32/76 (42%)
Frame = +3
Query: 693 RNFNAXVHXAHIFGLPVAEYMRTLAXXRRXFFPETVWXSXFKNRXKSXMIFEXNFXKXHE 872
+ FNA VH HI G VA+YMR L + + + KN M+ E + K H
Sbjct: 188 KEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQ-FSQYIKNSVTPDMM-EEMYKKAHA 245
Query: 873 XXSXXPXPXKXDKRRI 920
P K K+ +
Sbjct: 246 AIRENPVYEKKPKKEV 261
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 191 bits (466), Expect = 5e-48
Identities = 83/125 (66%), Positives = 98/125 (78%)
Frame = +1
Query: 280 LIVRXSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXX 459
+IVR +N+D+ CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 460 XXXXXDSLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAXDGG 639
D +Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGA DGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 640 LNVPH 654
L++PH
Sbjct: 121 LSIPH 125
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 190 bits (464), Expect = 9e-48
Identities = 83/98 (84%), Positives = 94/98 (95%)
Frame = +1
Query: 130 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRXSNKDV 309
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR +N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 310 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAA 423
CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAA
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAA 98
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 54.0 bits (124), Expect = 1e-06
Identities = 22/29 (75%), Positives = 26/29 (89%)
Frame = +1
Query: 586 TTTGARVFGAMKGAXDGGLNVPHSIKRFP 672
TTTG +VFGA+KGA DGGL++PHS KRFP
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFP 29
Score = 36.7 bits (81), Expect = 0.23
Identities = 23/76 (30%), Positives = 32/76 (42%)
Frame = +3
Query: 693 RNFNAXVHXAHIFGLPVAEYMRTLAXXRRXFFPETVWXSXFKNRXKSXMIFEXNFXKXHE 872
+ FNA VH HI G VA+YMR L + + + KN M+ E + K H
Sbjct: 36 KEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQ-FSQYIKNSVTPDMM-EEMYKKAHA 93
Query: 873 XXSXXPXPXKXDKRRI 920
P K K+ +
Sbjct: 94 AIRENPVYEKKPKKEV 109
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,100,964
Number of Sequences: 237096
Number of extensions: 2840062
Number of successful extensions: 13800
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13800
length of database: 76,859,062
effective HSP length: 94
effective length of database: 54,572,038
effective search space used: 23411404302
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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