Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_D02_e492_08.seq
(1532 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical ... 58 1e-08
AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein. 31 0.41
AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cel... 31 0.41
AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein. 31 0.41
AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cel... 31 0.42
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 29 8.7
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 29 8.7
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 29 8.7
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 29 8.7
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 29 8.7
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 29 8.7
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 29 8.7
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 29 8.7
>AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical
protein Y80D3A.2 protein.
Length = 1467
Score = 58.4 bits (135), Expect = 1e-08
Identities = 27/87 (31%), Positives = 45/87 (51%)
Frame = +2
Query: 86 RARLGLYIFARANLFRNCFELQPTFNQLIERPLQLELVPGERYPAQRRNDAAVPEALILS 265
RARLGLY+ R+ +F +C EL P + P +L ++P E +P R+ + + +
Sbjct: 1298 RARLGLYVLGRSKVFMDCLELTPAMRIFAKYPRKLVILPFEAHPTIRKWNERSKDGEPME 1357
Query: 266 ITDMPHMARYVYDLYLEKVRDCTKQYE 346
I D HM +V++ Y+ + YE
Sbjct: 1358 IQDTLHMTHFVHEFYMSNLPAMRDAYE 1384
>AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein.
Length = 728
Score = 31.5 bits (68), Expect(2) = 0.41
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 380 AKASRSQQPDRLVPTHPGATDGQDSDD-EESAIPSTSSFQPTHIVNEIDEPPELS 541
A A S+ D P PG+T+ QD+ D +S S +S Q E E PE++
Sbjct: 130 ASAQASEASDASAPEVPGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIA 184
Score = 20.6 bits (41), Expect(2) = 0.41
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 200 PGERYPAQRRNDAAVPEALILSITDMP 280
P PAQ ++A+ P+ + D+P
Sbjct: 96 PEASAPAQEASEASAPDQEAPEVQDVP 122
>AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform a protein.
Length = 728
Score = 31.5 bits (68), Expect(2) = 0.41
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 380 AKASRSQQPDRLVPTHPGATDGQDSDD-EESAIPSTSSFQPTHIVNEIDEPPELS 541
A A S+ D P PG+T+ QD+ D +S S +S Q E E PE++
Sbjct: 130 ASAQASEASDASAPEVPGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIA 184
Score = 20.6 bits (41), Expect(2) = 0.41
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 200 PGERYPAQRRNDAAVPEALILSITDMP 280
P PAQ ++A+ P+ + D+P
Sbjct: 96 PEASAPAQEASEASAPDQEAPEVQDVP 122
>AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein.
Length = 691
Score = 31.5 bits (68), Expect(2) = 0.41
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 380 AKASRSQQPDRLVPTHPGATDGQDSDD-EESAIPSTSSFQPTHIVNEIDEPPELS 541
A A S+ D P PG+T+ QD+ D +S S +S Q E E PE++
Sbjct: 93 ASAQASEASDASAPEVPGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIA 147
Score = 20.6 bits (41), Expect(2) = 0.41
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 200 PGERYPAQRRNDAAVPEALILSITDMP 280
P PAQ ++A+ P+ + D+P
Sbjct: 59 PEASAPAQEASEASAPDQEAPEVQDVP 85
>AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform b protein.
Length = 512
Score = 31.5 bits (68), Expect(2) = 0.42
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 380 AKASRSQQPDRLVPTHPGATDGQDSDD-EESAIPSTSSFQPTHIVNEIDEPPELS 541
A A S+ D P PG+T+ QD+ D +S S +S Q E E PE++
Sbjct: 130 ASAQASEASDASAPEVPGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIA 184
Score = 20.6 bits (41), Expect(2) = 0.42
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 200 PGERYPAQRRNDAAVPEALILSITDMP 280
P PAQ ++A+ P+ + D+P
Sbjct: 96 PEASAPAQEASEASAPDQEAPEVQDVP 122
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 29.1 bits (62), Expect = 8.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 142 KAIPEEICPREDIKAKSGPXLGPNXLQKRGXPLVXG 35
K+ PE++ R D +KSGP N LQ R + G
Sbjct: 659 KSRPEKVQIRHDTISKSGPSNAINALQARSQSMTSG 694
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 29.1 bits (62), Expect = 8.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 142 KAIPEEICPREDIKAKSGPXLGPNXLQKRGXPLVXG 35
K+ PE++ R D +KSGP N LQ R + G
Sbjct: 950 KSRPEKVQIRHDTISKSGPSNAINALQARSQSMTSG 985
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 29.1 bits (62), Expect = 8.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 142 KAIPEEICPREDIKAKSGPXLGPNXLQKRGXPLVXG 35
K+ PE++ R D +KSGP N LQ R + G
Sbjct: 965 KSRPEKVQIRHDTISKSGPSNAINALQARSQSMTSG 1000
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 29.1 bits (62), Expect = 8.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 142 KAIPEEICPREDIKAKSGPXLGPNXLQKRGXPLVXG 35
K+ PE++ R D +KSGP N LQ R + G
Sbjct: 965 KSRPEKVQIRHDTISKSGPSNAINALQARSQSMTSG 1000
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 29.1 bits (62), Expect = 8.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 142 KAIPEEICPREDIKAKSGPXLGPNXLQKRGXPLVXG 35
K+ PE++ R D +KSGP N LQ R + G
Sbjct: 659 KSRPEKVQIRHDTISKSGPSNAINALQARSQSMTSG 694
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 29.1 bits (62), Expect = 8.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 142 KAIPEEICPREDIKAKSGPXLGPNXLQKRGXPLVXG 35
K+ PE++ R D +KSGP N LQ R + G
Sbjct: 950 KSRPEKVQIRHDTISKSGPSNAINALQARSQSMTSG 985
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 29.1 bits (62), Expect = 8.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 142 KAIPEEICPREDIKAKSGPXLGPNXLQKRGXPLVXG 35
K+ PE++ R D +KSGP N LQ R + G
Sbjct: 965 KSRPEKVQIRHDTISKSGPSNAINALQARSQSMTSG 1000
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 29.1 bits (62), Expect = 8.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 142 KAIPEEICPREDIKAKSGPXLGPNXLQKRGXPLVXG 35
K+ PE++ R D +KSGP N LQ R + G
Sbjct: 965 KSRPEKVQIRHDTISKSGPSNAINALQARSQSMTSG 1000
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,673,327
Number of Sequences: 27780
Number of extensions: 455118
Number of successful extensions: 1264
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1264
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4411031650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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