Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_C11_e563_05.seq
         (1569 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0DQA7 Cluster: Chromosome undetermined scaffold_6, who...    37   1.7  
UniRef50_A0BFK7 Cluster: Chromosome undetermined scaffold_104, w...    34   8.9  

>UniRef50_A0DQA7 Cluster: Chromosome undetermined scaffold_6, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_6,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1534

 Score = 36.7 bits (81), Expect = 1.7
 Identities = 30/120 (25%), Positives = 52/120 (43%)
 Frame = +1

Query: 202 FHLRIMFNFFCELVYNL*ISFIITQAI*KAXERRSKAFNFLIKRLTEHLK*NILLCSTGV 381
           +HL    N+       + I F I   +       +K FN +I   +  L   +  CS  +
Sbjct: 198 YHLNAFQNYNGPSYDYIGIGFCILSFLIFLNSLLNKGFNSIITSFSSQLMATLFNCSFCI 257

Query: 382 IVVYLCHKRRH*IKFILLLFLDVTVYFIGSVDN**ANDLYKAILIYRIYYSKLRFKIE*E 561
           +V+Y    +   I F LLL  + T Y + ++ +  A  ++  +LIY I+  K  F +  E
Sbjct: 258 LVIYFILFKI--IAFFLLLQTNSTEYIVENLSDLIAPQIFIMMLIYSIFLIKALFTLSPE 315


>UniRef50_A0BFK7 Cluster: Chromosome undetermined scaffold_104, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_104, whole genome
            shotgun sequence - Paramecium tetraurelia
          Length = 1152

 Score = 34.3 bits (75), Expect = 8.9
 Identities = 20/82 (24%), Positives = 22/82 (26%)
 Frame = +3

Query: 1257 PXGXPAXVXXAXRGPVPXEXXXXXLTFPXXXPRXPXXVGXRXXPXPAXTSXXXRXRXPPP 1436
            P   P         P+P       +  P   P  P   G    P P           PPP
Sbjct: 603  PPPPPPPPPPVKSAPLPPPPPPPKIAAPPPPPPPPMKAGPPPPPPPPGVPRPPGGPPPPP 662

Query: 1437 XXXXPKTGGAXPLXPXXXXXPP 1502
                 K GG  P  P     PP
Sbjct: 663  PPPGSKAGGPPPPPPPGAPQPP 684


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,102,650,149
Number of Sequences: 1657284
Number of extensions: 18874829
Number of successful extensions: 39954
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 30377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37460
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 168570820550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)