Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_C10_e555_06.seq
         (1528 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    26   2.5  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   4.4  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      25   7.6  

>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 26.2 bits (55), Expect = 2.5
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 654 SVSRSPPTHSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTSC 785
           +V+R    HS  R   +R  + +  S +RY   V + +TQV  C
Sbjct: 820 AVTRLMQNHSGPRTAKSRLLAYVAESVLRYAAPVWAEATQVREC 863


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.4 bits (53), Expect = 4.4
 Identities = 11/44 (25%), Positives = 19/44 (43%)
 Frame = +3

Query: 699 ANRTSSALRISSMRYLLSVRSSSTQVTSCGHSNLNNPTGGWRKK 830
           + RT +        +   + SS   VTSC  S ++   G W ++
Sbjct: 531 SERTGTGTNAGKTTFSNIIGSSGPSVTSCTGSEIDKQVGLWERR 574


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 24.6 bits (51), Expect = 7.6
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = +3

Query: 486 CSCSGCVRSTTACSFVSTRPQ*TCFVSLSPILHGAT 593
           C C G            TRP  +CFVS+  +L   T
Sbjct: 74  CYCEGHCPGNLQNGTCETRPGGSCFVSVEAVLDEET 109


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,192,036
Number of Sequences: 2352
Number of extensions: 21215
Number of successful extensions: 39
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 179220195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)