Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_C09_e547_05.seq
         (1540 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    25   1.1  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    25   2.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    25   2.0  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +1

Query: 256 STSLVVQCVPSP-SLCRRIPSSTSSAPPPCRRILTLL 363
           S++ +V+ VP P     + PSST +  PP R + T L
Sbjct: 385 SSNEIVEPVPQPVEEVTQKPSSTKAPAPPSRDLTTTL 421


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -1

Query: 262 LCFCFFFIVLTVTFF 218
           LCFCF+++++ V  F
Sbjct: 324 LCFCFYWLLVMVAMF 338


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -1

Query: 262 LCFCFFFIVLTVTFF 218
           LCFCF+++++ V  F
Sbjct: 280 LCFCFYWLLVMVAMF 294


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,932
Number of Sequences: 336
Number of extensions: 3874
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 46296100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)