Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_C09_e547_05.seq
(1540 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001479-1|AAN71234.1| 370|Drosophila melanogaster LD21576p pro... 128 2e-29
AE013599-3725|AAF47097.1| 370|Drosophila melanogaster CG5330-PA... 128 2e-29
U39553-1|AAB07898.1| 370|Drosophila melanogaster nucleosome ass... 128 2e-29
AY113255-1|AAM29260.1| 283|Drosophila melanogaster AT14585p pro... 100 6e-21
AE014297-4190|AAF56755.2| 283|Drosophila melanogaster CG5017-PA... 100 6e-21
AY058402-1|AAL13631.1| 375|Drosophila melanogaster GH17085p pro... 71 4e-12
AL109630-5|CAB65874.1| 375|Drosophila melanogaster EG:BACR7A4.1... 71 4e-12
AE014298-125|AAF45565.2| 375|Drosophila melanogaster CG3708-PA ... 71 4e-12
AY071101-1|AAL48723.1| 405|Drosophila melanogaster RE16127p pro... 30 9.8
AE014297-813|AAF54286.2| 405|Drosophila melanogaster CG13318-PA... 30 9.8
>BT001479-1|AAN71234.1| 370|Drosophila melanogaster LD21576p
protein.
Length = 370
Score = 128 bits (310), Expect = 2e-29
Identities = 57/122 (46%), Positives = 74/122 (60%)
Frame = +3
Query: 84 NDYFTNNILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWXXXXXXXXXXXXXXXXXX 263
N+YF+N++LTK+Y +K D +P FEGPEIY C GC INW
Sbjct: 197 NEYFSNSVLTKQYVLKSTVDPNDPFAFEGPEIYKCTGCTINWEKKMNLTVKTIRKKQKHK 256
Query: 264 SRGSVRTVTKSVQADSFFNFFSPPTMPEDPNSTVTSEIQALLTADFEIGHYIRERVVSRA 443
RG+VRT+ K V DSFFNFFSPP +P D V + Q +L DFEIGH++R R++ +A
Sbjct: 257 ERGAVRTIVKQVPTDSFFNFFSPPEVPSD-QEEVDDDSQQILATDFEIGHFLRARIIPKA 315
Query: 444 VL 449
VL
Sbjct: 316 VL 317
>AE013599-3725|AAF47097.1| 370|Drosophila melanogaster CG5330-PA
protein.
Length = 370
Score = 128 bits (310), Expect = 2e-29
Identities = 57/122 (46%), Positives = 74/122 (60%)
Frame = +3
Query: 84 NDYFTNNILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWXXXXXXXXXXXXXXXXXX 263
N+YF+N++LTK+Y +K D +P FEGPEIY C GC INW
Sbjct: 197 NEYFSNSVLTKQYVLKSTVDPNDPFAFEGPEIYKCTGCTINWEKKMNLTVKTIRKKQKHK 256
Query: 264 SRGSVRTVTKSVQADSFFNFFSPPTMPEDPNSTVTSEIQALLTADFEIGHYIRERVVSRA 443
RG+VRT+ K V DSFFNFFSPP +P D V + Q +L DFEIGH++R R++ +A
Sbjct: 257 ERGAVRTIVKQVPTDSFFNFFSPPEVPSD-QEEVDDDSQQILATDFEIGHFLRARIIPKA 315
Query: 444 VL 449
VL
Sbjct: 316 VL 317
>U39553-1|AAB07898.1| 370|Drosophila melanogaster nucleosome
assembly protein NAP-1 protein.
Length = 370
Score = 128 bits (309), Expect = 2e-29
Identities = 56/122 (45%), Positives = 74/122 (60%)
Frame = +3
Query: 84 NDYFTNNILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWXXXXXXXXXXXXXXXXXX 263
N+YF+N++LTK+Y +K D +P FEGPEIY C GC INW
Sbjct: 197 NEYFSNSVLTKQYVLKSTVDPNDPFAFEGPEIYKCTGCTINWEKKMNLTVKTIRKKQKHK 256
Query: 264 SRGSVRTVTKSVQADSFFNFFSPPTMPEDPNSTVTSEIQALLTADFEIGHYIRERVVSRA 443
RG+VRT+ K V DSFFNFFSPP +P D + + Q +L DFEIGH++R R++ +A
Sbjct: 257 ERGAVRTIVKQVPTDSFFNFFSPPEVPSD-QEEIDDDSQQILATDFEIGHFLRARIIPKA 315
Query: 444 VL 449
VL
Sbjct: 316 VL 317
>AY113255-1|AAM29260.1| 283|Drosophila melanogaster AT14585p
protein.
Length = 283
Score = 100 bits (239), Expect = 6e-21
Identities = 50/122 (40%), Positives = 72/122 (59%)
Frame = +3
Query: 84 NDYFTNNILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWXXXXXXXXXXXXXXXXXX 263
NDYFTN +LTK Y + C PD ++PL ++G EIY C+GC I+W
Sbjct: 145 NDYFTNTVLTKTYFLNCLPDPDDPLAYDGAEIYKCEGCVIDW------------------ 186
Query: 264 SRGSVRTVTKSVQADSFFNFFSPPTMPEDPNSTVTSEIQALLTADFEIGHYIRERVVSRA 443
+ +T T++ Q SFF FFSPP +PED ++ A+L DFE+G Y++ERV+ +A
Sbjct: 187 KQTKDQTKTEN-QEPSFFEFFSPPLLPEDTLDPNYCDVNAMLQNDFEVGFYLKERVIPKA 245
Query: 444 VL 449
V+
Sbjct: 246 VI 247
>AE014297-4190|AAF56755.2| 283|Drosophila melanogaster CG5017-PA
protein.
Length = 283
Score = 100 bits (239), Expect = 6e-21
Identities = 50/122 (40%), Positives = 72/122 (59%)
Frame = +3
Query: 84 NDYFTNNILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWXXXXXXXXXXXXXXXXXX 263
NDYFTN +LTK Y + C PD ++PL ++G EIY C+GC I+W
Sbjct: 145 NDYFTNTVLTKTYFLNCLPDPDDPLAYDGAEIYKCEGCVIDW------------------ 186
Query: 264 SRGSVRTVTKSVQADSFFNFFSPPTMPEDPNSTVTSEIQALLTADFEIGHYIRERVVSRA 443
+ +T T++ Q SFF FFSPP +PED ++ A+L DFE+G Y++ERV+ +A
Sbjct: 187 KQTKDQTKTEN-QEPSFFEFFSPPLLPEDTLDPNYCDVNAMLQNDFEVGFYLKERVIPKA 245
Query: 444 VL 449
V+
Sbjct: 246 VI 247
>AY058402-1|AAL13631.1| 375|Drosophila melanogaster GH17085p
protein.
Length = 375
Score = 70.9 bits (166), Expect = 4e-12
Identities = 40/115 (34%), Positives = 57/115 (49%)
Frame = +3
Query: 105 ILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWXXXXXXXXXXXXXXXXXXSRGSVRT 284
+LTK Y ++ D E P FEGPEI C+GC I+W R
Sbjct: 237 LLTKRYFLQHSADPEYPFLFEGPEIVRCEGCHIHW----RDGSNLTLQTVESRRRNRAHR 292
Query: 285 VTKSVQADSFFNFFSPPTMPEDPNSTVTSEIQALLTADFEIGHYIRERVVSRAVL 449
VTK + +SFF FF+PP + S + + +L DFE+G +R ++V +AVL
Sbjct: 293 VTKVMPRESFFRFFAPPQALD--LSLADEKTKLILGNDFEVGFLLRTQIVPKAVL 345
>AL109630-5|CAB65874.1| 375|Drosophila melanogaster EG:BACR7A4.18
protein.
Length = 375
Score = 70.9 bits (166), Expect = 4e-12
Identities = 40/115 (34%), Positives = 57/115 (49%)
Frame = +3
Query: 105 ILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWXXXXXXXXXXXXXXXXXXSRGSVRT 284
+LTK Y ++ D E P FEGPEI C+GC I+W R
Sbjct: 237 LLTKRYFLQHSADPEYPFLFEGPEIVRCEGCHIHW----RDGSNLTLQTVESRRRNRAHR 292
Query: 285 VTKSVQADSFFNFFSPPTMPEDPNSTVTSEIQALLTADFEIGHYIRERVVSRAVL 449
VTK + +SFF FF+PP + S + + +L DFE+G +R ++V +AVL
Sbjct: 293 VTKVMPRESFFRFFAPPQALD--LSLADEKTKLILGNDFEVGFLLRTQIVPKAVL 345
>AE014298-125|AAF45565.2| 375|Drosophila melanogaster CG3708-PA
protein.
Length = 375
Score = 70.9 bits (166), Expect = 4e-12
Identities = 40/115 (34%), Positives = 57/115 (49%)
Frame = +3
Query: 105 ILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWXXXXXXXXXXXXXXXXXXSRGSVRT 284
+LTK Y ++ D E P FEGPEI C+GC I+W R
Sbjct: 237 LLTKRYFLQHSADPEYPFLFEGPEIVRCEGCHIHW----RDGSNLTLQTVESRRRNRAHR 292
Query: 285 VTKSVQADSFFNFFSPPTMPEDPNSTVTSEIQALLTADFEIGHYIRERVVSRAVL 449
VTK + +SFF FF+PP + S + + +L DFE+G +R ++V +AVL
Sbjct: 293 VTKVMPRESFFRFFAPPQALD--LSLADEKTKLILGNDFEVGFLLRTQIVPKAVL 345
>AY071101-1|AAL48723.1| 405|Drosophila melanogaster RE16127p
protein.
Length = 405
Score = 29.9 bits (64), Expect = 9.8
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = -2
Query: 654 G*WDDINSLTTTGV----CIPPGSQARPCPVSSRVSSGLV 547
G W + S+ + G C+PPGS A P P + SG +
Sbjct: 75 GTWPPVPSIVSPGTSYCQCVPPGSCANPLPTAPSDGSGQI 114
>AE014297-813|AAF54286.2| 405|Drosophila melanogaster CG13318-PA
protein.
Length = 405
Score = 29.9 bits (64), Expect = 9.8
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = -2
Query: 654 G*WDDINSLTTTGV----CIPPGSQARPCPVSSRVSSGLV 547
G W + S+ + G C+PPGS A P P + SG +
Sbjct: 75 GTWPPVPSIVSPGTSYCQCVPPGSCANPLPTAPSDGSGQI 114
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,519,018
Number of Sequences: 53049
Number of extensions: 718999
Number of successful extensions: 1933
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1921
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8615703744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -