Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_C09_e547_05.seq
         (1540 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    24   4.0  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    24   4.0  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   9.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   9.3  

>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = +3

Query: 87  DYFTNN---ILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINW 209
           D+F  N   IL +EY     P  E+ +E    E+ S +GC++ W
Sbjct: 90  DFFVKNARMILLEEYI----PRVESVVETCKKEVTSTEGCEVAW 129


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = +3

Query: 87  DYFTNN---ILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINW 209
           D+F  N   IL +EY     P  E+ +E    E+ S +GC++ W
Sbjct: 64  DFFVKNARMILLEEYI----PRVESVVETCKKEVTSTEGCEVAW 103


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 614 TPVVVSELISSHHPPQLIVFLYTRLYHY 697
           T  VVS  IS + P  +++ +Y RLY Y
Sbjct: 191 TYAVVSSSISFYVPCIVMLGIYCRLYCY 218


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 283 PSPSLCRRIPSSTSSAPP 336
           P+P +     SSTSS+PP
Sbjct: 513 PNPRIASAPSSSTSSSPP 530


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 277,030
Number of Sequences: 438
Number of extensions: 5255
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 53950875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)