Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_C07_e531_05.seq
(1508 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 25 1.7
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 25 1.7
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 5.2
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 5.2
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 9.1
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 9.1
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 9.1
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 9.1
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 9.1
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 9.1
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 9.1
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 9.1
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 9.1
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 9.1
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 9.1
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 9.1
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 9.1
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 25.0 bits (52), Expect = 1.7
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -2
Query: 313 HQEEAL*GRAQLMKALTQDMSPQGAHRT*TESPPHS 206
H+EE L ++ + A+ ++ Q AH + +E HS
Sbjct: 585 HREEDLGSESKTINAVVNALAEQAAHASASEESVHS 620
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 25.0 bits (52), Expect = 1.7
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -2
Query: 313 HQEEAL*GRAQLMKALTQDMSPQGAHRT*TESPPHS 206
H+EE L ++ + A+ ++ Q AH + +E HS
Sbjct: 553 HREEDLGSESKTINAVVNALAEQAAHASASEESVHS 588
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.4 bits (48), Expect = 5.2
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 348 SQRPDAQSRETAKEKEEDRT 407
++R + RET+KE+ +DRT
Sbjct: 52 NEREYRKYRETSKERSQDRT 71
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.4 bits (48), Expect = 5.2
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 348 SQRPDAQSRETAKEKEEDRT 407
++R + RET+KE+ +DRT
Sbjct: 52 NEREYRKYRETSKERSQDRT 71
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 9.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 348 SQRPDAQSRETAKEKEEDRT 407
++R + RET+KE+ DRT
Sbjct: 52 NEREYQKYRETSKERSRDRT 71
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 9.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 348 SQRPDAQSRETAKEKEEDRT 407
++R + RET+KE+ DRT
Sbjct: 52 NEREYQKYRETSKERSRDRT 71
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 9.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 348 SQRPDAQSRETAKEKEEDRT 407
++R + RET+KE+ DRT
Sbjct: 52 NEREYQKYRETSKERSRDRT 71
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 9.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 348 SQRPDAQSRETAKEKEEDRT 407
++R + RET+KE+ DRT
Sbjct: 52 NEREYQKYRETSKERSRDRT 71
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 9.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 348 SQRPDAQSRETAKEKEEDRT 407
++R + RET+KE+ DRT
Sbjct: 52 NEREYQKYRETSKERSRDRT 71
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 9.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 348 SQRPDAQSRETAKEKEEDRT 407
++R + RET+KE+ DRT
Sbjct: 52 NEREYQKYRETSKERSRDRT 71
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 9.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 348 SQRPDAQSRETAKEKEEDRT 407
++R + RET+KE+ DRT
Sbjct: 52 NEREYQKYRETSKERSRDRT 71
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 9.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 348 SQRPDAQSRETAKEKEEDRT 407
++R + RET+KE+ DRT
Sbjct: 52 NEREYRKYRETSKERSRDRT 71
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 9.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 348 SQRPDAQSRETAKEKEEDRT 407
++R + RET+KE+ DRT
Sbjct: 51 NEREYRKYRETSKERSRDRT 70
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 9.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 348 SQRPDAQSRETAKEKEEDRT 407
++R + RET+KE+ DRT
Sbjct: 52 NEREYRKYRETSKERSRDRT 71
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 9.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 348 SQRPDAQSRETAKEKEEDRT 407
++R + RET+KE+ DRT
Sbjct: 52 NEREYRKYRETSKERSRDRT 71
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 9.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 348 SQRPDAQSRETAKEKEEDRT 407
++R + RET+KE+ DRT
Sbjct: 52 NEREYRKYRETSKERSRDRT 71
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 9.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 348 SQRPDAQSRETAKEKEEDRT 407
++R + RET+KE+ DRT
Sbjct: 52 NEREYRKYRETSKERSRDRT 71
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 304,590
Number of Sequences: 438
Number of extensions: 6031
Number of successful extensions: 41
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 52754625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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