Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_C06_e523_06.seq
(1550 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P40301 Cluster: Proteasome subunit alpha type-2; n=48; ... 83 2e-14
UniRef50_P25787 Cluster: Proteasome subunit alpha type-2; n=54; ... 79 2e-13
UniRef50_A4RHU7 Cluster: Proteasome subunit alpha type; n=16; Fu... 61 7e-08
UniRef50_Q017X9 Cluster: Alpha 2 subunit of 20S proteasome; n=6;... 60 1e-07
UniRef50_Q4CKY8 Cluster: Proteasome alpha 2 subunit, putative; n... 56 3e-06
UniRef50_A5E6Y2 Cluster: Proteasome component Y7; n=4; Saccharom... 56 3e-06
UniRef50_P23638 Cluster: Proteasome component Y13; n=3; Saccharo... 46 0.003
UniRef50_A2FJV7 Cluster: Family T1, proteasome alpha subunit, th... 44 0.011
UniRef50_A0CDQ2 Cluster: Chromosome undetermined scaffold_17, wh... 44 0.014
UniRef50_Q7QUL1 Cluster: GLP_436_20835_20083; n=2; Giardia intes... 43 0.019
UniRef50_UPI0000E48E53 Cluster: PREDICTED: similar to Proteasome... 42 0.058
UniRef50_UPI0000E1F8C2 Cluster: PREDICTED: hypothetical protein;... 42 0.058
UniRef50_A2E5C0 Cluster: Family T1, proteasome alpha subunit, th... 41 0.10
UniRef50_Q0MYX3 Cluster: Proteasome subunit alpha type; n=3; Euk... 40 0.18
UniRef50_Q7RM37 Cluster: Proteasome subunit alpha type; n=7; Aco... 38 0.54
UniRef50_P25789 Cluster: Proteasome subunit alpha type-4; n=113;... 38 0.54
UniRef50_Q7QZC5 Cluster: GLP_43_57537_58271; n=3; Giardia intest... 38 0.94
UniRef50_Q9PTW9 Cluster: Proteasome subunit alpha type-7; n=24; ... 38 0.94
UniRef50_UPI0000D9E814 Cluster: PREDICTED: similar to proteasome... 37 1.2
UniRef50_Q4QFV4 Cluster: Proteasome subunit alpha type; n=7; Try... 37 1.2
UniRef50_Q23TC6 Cluster: Proteasome subunit alpha type 7-like, p... 37 1.2
UniRef50_Q8TAA3 Cluster: Proteasome subunit alpha type-7-like; n... 37 1.2
UniRef50_Q09682 Cluster: Probable proteasome subunit alpha type-... 37 1.6
UniRef50_Q10329 Cluster: Probable proteasome subunit alpha type-... 36 2.2
UniRef50_O81146 Cluster: Proteasome subunit alpha type-6-A; n=15... 36 2.9
UniRef50_P34119 Cluster: Proteasome subunit alpha type-4; n=4; E... 36 3.8
UniRef50_UPI0000E49FB5 Cluster: PREDICTED: hypothetical protein;... 35 6.6
UniRef50_Q5V2X8 Cluster: Proteasome subunit alpha 1; n=8; Haloba... 35 6.6
UniRef50_O81148 Cluster: Proteasome subunit alpha type-4; n=5; M... 35 6.6
UniRef50_A0CZU2 Cluster: Chromosome undetermined scaffold_32, wh... 34 8.8
UniRef50_Q4JB24 Cluster: Proteasome subunit alpha; n=6; Thermopr... 34 8.8
>UniRef50_P40301 Cluster: Proteasome subunit alpha type-2; n=48;
Eukaryota|Rep: Proteasome subunit alpha type-2 -
Drosophila melanogaster (Fruit fly)
Length = 234
Score = 83.0 bits (196), Expect = 2e-14
Identities = 43/61 (70%), Positives = 47/61 (77%)
Frame = +3
Query: 36 SERYSFSLTTFSPSGKLVSXPSML*GLXADGGTSVGIXASNGVVIATENKHKSILYDEHS 215
+ERYSFSLTTFSPSGKLV L + G SVGI ASNGVVIATENKHKS LY++HS
Sbjct: 3 TERYSFSLTTFSPSGKLVQLEYAL-AAVSGGAPSVGIIASNGVVIATENKHKSPLYEQHS 61
Query: 216 V 218
V
Sbjct: 62 V 62
Score = 78.6 bits (185), Expect = 4e-13
Identities = 37/53 (69%), Positives = 40/53 (75%)
Frame = +2
Query: 254 MVYSGMXPDYRXLVXQAXKMXQQYYLLXHEPIPXXXMVQRVATVMXEYTQSGG 412
MVYSGM PDYR LV QA K+ Q YYL EPIP +VQRVAT+M EYTQSGG
Sbjct: 74 MVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGG 126
>UniRef50_P25787 Cluster: Proteasome subunit alpha type-2; n=54;
Eukaryota|Rep: Proteasome subunit alpha type-2 - Homo
sapiens (Human)
Length = 234
Score = 79.4 bits (187), Expect = 2e-13
Identities = 36/53 (67%), Positives = 42/53 (79%)
Frame = +2
Query: 254 MVYSGMXPDYRXLVXQAXKMXQQYYLLXHEPIPXXXMVQRVATVMXEYTQSGG 412
+VYSGM PDYR LV +A K+ QQYYL+ EPIP +VQRVA+VM EYTQSGG
Sbjct: 74 LVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGG 126
Score = 74.5 bits (175), Expect = 7e-12
Identities = 40/58 (68%), Positives = 42/58 (72%)
Frame = +3
Query: 45 YSFSLTTFSPSGKLVSXPSML*GLXADGGTSVGIXASNGVVIATENKHKSILYDEHSV 218
YSFSLTTFSPSGKLV L A G SVGI A+NGVV+ATE K KSILYDE SV
Sbjct: 6 YSFSLTTFSPSGKLVQIEYAL-AAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSV 62
>UniRef50_A4RHU7 Cluster: Proteasome subunit alpha type; n=16;
Fungi/Metazoa group|Rep: Proteasome subunit alpha type -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 283
Score = 61.3 bits (142), Expect = 7e-08
Identities = 33/61 (54%), Positives = 41/61 (67%)
Frame = +3
Query: 36 SERYSFSLTTFSPSGKLVSXPSML*GLXADGGTSVGIXASNGVVIATENKHKSILYDEHS 215
++RYSFSLTTFSPSGKLV L G T++GI A+NG+V+ATE K S L D S
Sbjct: 2 ADRYSFSLTTFSPSGKLVQIEYAL-NAVNQGVTALGIKATNGIVLATEKKSSSPLTDPSS 60
Query: 216 V 218
+
Sbjct: 61 L 61
Score = 49.6 bits (113), Expect = 2e-04
Identities = 27/54 (50%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +2
Query: 254 MVYSGMXPDYRXLVXQAXKMXQQ-YYLLXHEPIPXXXMVQRVATVMXEYTQSGG 412
MVY+GM PDYR LV +A K+ Y + +E P +VQ VA V+ E TQSGG
Sbjct: 73 MVYAGMGPDYRVLVDKARKVSHSGYKRIYNEYPPTRILVQDVARVVQEATQSGG 126
>UniRef50_Q017X9 Cluster: Alpha 2 subunit of 20S proteasome; n=6;
Eukaryota|Rep: Alpha 2 subunit of 20S proteasome -
Ostreococcus tauri
Length = 270
Score = 60.5 bits (140), Expect = 1e-07
Identities = 34/59 (57%), Positives = 40/59 (67%)
Frame = +3
Query: 42 RYSFSLTTFSPSGKLVSXPSML*GLXADGGTSVGIXASNGVVIATENKHKSILYDEHSV 218
RYSFSLTTFSPSG+LV L + A G TS+GI A +GVV+ATE K S L D +V
Sbjct: 40 RYSFSLTTFSPSGELVQIKHALAAISA-GATSLGIKAVDGVVLATEKKLPSTLVDASTV 97
Score = 56.0 bits (129), Expect = 3e-06
Identities = 26/53 (49%), Positives = 31/53 (58%)
Frame = +2
Query: 254 MVYSGMXPDYRXLVXQAXKMXQQYYLLXHEPIPXXXMVQRVATVMXEYTQSGG 412
+ YSGM PD+R L A K Q YY E IP +V+ ATVM E+TQ GG
Sbjct: 109 IAYSGMGPDFRVLTRMARKETQTYYRTYKESIPVSQLVRETATVMQEFTQQGG 161
>UniRef50_Q4CKY8 Cluster: Proteasome alpha 2 subunit, putative; n=1;
Trypanosoma cruzi|Rep: Proteasome alpha 2 subunit,
putative - Trypanosoma cruzi
Length = 179
Score = 55.6 bits (128), Expect = 3e-06
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = +2
Query: 260 YSGMXPDYRXLVXQAXKMXQQYYLLXHEPIPXXXMVQRVATVMXEYTQSGG 412
YSG+ PD R LV A K Q+Y L HEP+P +V++++++ E+TQSGG
Sbjct: 22 YSGIGPDCRVLVDAARKACQKYRLTYHEPMPVSQLVRQISSLYQEFTQSGG 72
>UniRef50_A5E6Y2 Cluster: Proteasome component Y7; n=4;
Saccharomycetales|Rep: Proteasome component Y7 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 178
Score = 55.6 bits (128), Expect = 3e-06
Identities = 29/54 (53%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Frame = +2
Query: 254 MVYSGMXPDYRXLVXQAXKMXQ-QYYLLXHEPIPXXXMVQRVATVMXEYTQSGG 412
M YSGM PD+R LV +A K+ Q Y L+ +E P MVQ +A VM E TQSGG
Sbjct: 1 MTYSGMGPDFRVLVDKARKLAQTNYKLIYNEYPPVRIMVQEIAKVMQESTQSGG 54
>UniRef50_P23638 Cluster: Proteasome component Y13; n=3;
Saccharomycetaceae|Rep: Proteasome component Y13 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 258
Score = 46.0 bits (104), Expect = 0.003
Identities = 24/59 (40%), Positives = 34/59 (57%)
Frame = +3
Query: 33 GSERYSFSLTTFSPSGKLVSXPSML*GLXADGGTSVGIXASNGVVIATENKHKSILYDE 209
GS RY T FSP G+L L + + GT++GI AS+G+V+A E K S L ++
Sbjct: 2 GSRRYDSRTTIFSPEGRLYQVEYALESI-SHAGTAIGIMASDGIVLAAERKVTSTLLEQ 59
>UniRef50_A2FJV7 Cluster: Family T1, proteasome alpha subunit,
threonine peptidase; n=1; Trichomonas vaginalis G3|Rep:
Family T1, proteasome alpha subunit, threonine peptidase
- Trichomonas vaginalis G3
Length = 232
Score = 44.0 bits (99), Expect = 0.011
Identities = 26/53 (49%), Positives = 31/53 (58%)
Frame = +3
Query: 51 FSLTTFSPSGKLVSXPSML*GLXADGGTSVGIXASNGVVIATENKHKSILYDE 209
FSLTTFS GKL S L + GG VG+ A NG VIA E+K S L ++
Sbjct: 6 FSLTTFSSGGKLNQIESALKAVSL-GGQCVGVKAKNGAVIACESKPSSPLVEK 57
>UniRef50_A0CDQ2 Cluster: Chromosome undetermined scaffold_17, whole
genome shotgun sequence; n=3; Eukaryota|Rep: Chromosome
undetermined scaffold_17, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 245
Score = 43.6 bits (98), Expect = 0.014
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +3
Query: 30 RGSERYSFSLTTFSPSGKLVSXPSML*GLXADGGTSVGIXASNGVVIATENKHKSILYDE 209
RGS+ + F +T FSP G+L + G TS+G+ ++ V + TE + L DE
Sbjct: 3 RGSQGHEFYITLFSPEGRLYQVEYAFKAVKTSGLTSIGVKGTDTVCLITEKRVPDKLIDE 62
Query: 210 HSV 218
SV
Sbjct: 63 KSV 65
>UniRef50_Q7QUL1 Cluster: GLP_436_20835_20083; n=2; Giardia
intestinalis|Rep: GLP_436_20835_20083 - Giardia lamblia
ATCC 50803
Length = 250
Score = 43.2 bits (97), Expect = 0.019
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 254 MVYSGMXPDYRXLVXQAXKMXQQYYLLXHEPIPXXXMVQRVATVMXEYTQSGG 412
+ YSG D+R L+ K +QY+ E +P + + +A+ M EYTQ GG
Sbjct: 74 ITYSGFSADFRNLLNLGRKSYEQYWNEFQESMPVNMLARDIASTMQEYTQRGG 126
Score = 41.9 bits (94), Expect = 0.044
Identities = 26/55 (47%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 45 YSFSLTTFSPSGKLVSXPSML*GLXADGG-TSVGIXASNGVVIATENKHKSILYD 206
YSFSLTTFSPSG L L DGG S+GI +NGVV+ ++ L D
Sbjct: 6 YSFSLTTFSPSGHLRQITYAL--AAVDGGRLSIGIKCANGVVLMCHKAAENPLVD 58
>UniRef50_UPI0000E48E53 Cluster: PREDICTED: similar to Proteasome
(prosome macropain) subunit alpha type 4; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
Proteasome (prosome macropain) subunit alpha type 4 -
Strongylocentrotus purpuratus
Length = 257
Score = 41.5 bits (93), Expect = 0.058
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +3
Query: 36 SERYSFSLTTFSPSGKLVSXPSML*GLXADGGTSVGIXASNGVVIATENKHKSILYDE 209
S RY T FSP G+L + + GTS+GI AS+GV++A E ++ L D+
Sbjct: 2 SRRYDSKTTIFSPEGRLYQVEYAMEAI-GHAGTSLGILASDGVLLAAERRNTHKLLDD 58
>UniRef50_UPI0000E1F8C2 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 95
Score = 41.5 bits (93), Expect = 0.058
Identities = 24/55 (43%), Positives = 30/55 (54%)
Frame = -2
Query: 196 MLLCLFSVAITTPLDAXMPTEVPPSAXSP*SILGXETNLPEGLKVVREKL*RSDP 32
M C FSVA TTP A +PT+ P A + T+L +GL VV EK R+ P
Sbjct: 1 MNFCFFSVANTTPFAALIPTDRAPPAIAA-KAYSIRTSLSDGLNVVSEKPYRAPP 54
>UniRef50_A2E5C0 Cluster: Family T1, proteasome alpha subunit,
threonine peptidase; n=2; Trichomonas vaginalis G3|Rep:
Family T1, proteasome alpha subunit, threonine peptidase
- Trichomonas vaginalis G3
Length = 238
Score = 40.7 bits (91), Expect = 0.10
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +2
Query: 260 YSGMXPDYRXLVXQAXKMXQQYYLLXHEPIPXXXMVQRVATVMXEYTQSGG 412
++G+ D R LV +A Q Y L + IP + + +ATV YTQSGG
Sbjct: 73 FTGLPADARVLVEKAQFEAQSYRLTFEDAIPIENIARYIATVQLTYTQSGG 123
>UniRef50_Q0MYX3 Cluster: Proteasome subunit alpha type; n=3;
Eukaryota|Rep: Proteasome subunit alpha type - Emiliania
huxleyi
Length = 264
Score = 39.9 bits (89), Expect = 0.18
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 30 RGSER-YSFSLTTFSPSGKLVSXPSML*GLXADGGTSVGIXASNGVVIATENKHKSILYD 206
RGS Y +T FSP G+L + G TSVG+ ++ V+ T+ K LYD
Sbjct: 3 RGSSAGYDRHITIFSPEGRLYQVEYAFKAIKTSGLTSVGVRGADPCVVLTQRKVPDKLYD 62
Query: 207 EHSV 218
SV
Sbjct: 63 PESV 66
>UniRef50_Q7RM37 Cluster: Proteasome subunit alpha type; n=7;
Aconoidasida|Rep: Proteasome subunit alpha type -
Plasmodium yoelii yoelii
Length = 278
Score = 38.3 bits (85), Expect = 0.54
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 254 MVYSGMXPDYRXLVXQAXKMXQQYYLLXHEPIPXXXMVQRVATVMXEYTQSGG 412
+ +SG+ D R LV + Q+YYL +P P + + VA + ++T GG
Sbjct: 108 LAFSGLNADARILVNKTRLECQRYYLNMDQPAPVDYIAKYVARIQQKFTHRGG 160
>UniRef50_P25789 Cluster: Proteasome subunit alpha type-4; n=113;
Eukaryota|Rep: Proteasome subunit alpha type-4 - Homo
sapiens (Human)
Length = 261
Score = 38.3 bits (85), Expect = 0.54
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +3
Query: 36 SERYSFSLTTFSPSGKLVSXPSML*GLXADGGTSVGIXASNGVVIATENKHKSILYDE 209
S RY T FSP G+L + + GT +GI A++GV++A E ++ L DE
Sbjct: 2 SRRYDSRTTIFSPEGRLYQVEYAMEAI-GHAGTCLGILANDGVLLAAERRNIHKLLDE 58
Score = 34.7 bits (76), Expect = 6.6
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 263 SGMXPDYRXLVXQAXKMXQQYYLLXHEPIPXXXMVQRVATVMXEYTQSGGR 415
+G+ D L + + Q+Y L EPIP +V + + YTQ GG+
Sbjct: 77 AGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGK 127
>UniRef50_Q7QZC5 Cluster: GLP_43_57537_58271; n=3; Giardia
intestinalis|Rep: GLP_43_57537_58271 - Giardia lamblia
ATCC 50803
Length = 244
Score = 37.5 bits (83), Expect = 0.94
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 263 SGMXPDYRXLVXQAXKMXQQYYLLXHEPIPXXXMVQRVATVMXEYTQSGG 412
SG+ D L+ +A Q++ + EPIP +VQ ++ V YT GG
Sbjct: 75 SGLTSDANILIDEARTYSQKWLAVYDEPIPVEVLVQYISDVKQNYTHHGG 124
>UniRef50_Q9PTW9 Cluster: Proteasome subunit alpha type-7; n=24;
Bilateria|Rep: Proteasome subunit alpha type-7 -
Carassius auratus (Goldfish)
Length = 251
Score = 37.5 bits (83), Expect = 0.94
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +2
Query: 254 MVYSGMXPDYRXLVXQAXKMXQQYYLLXHEPIPXXXMVQRVATVMXEYTQSGGR 415
M ++G+ D R ++ +A Q + L +P+ + + +AT+ YTQS GR
Sbjct: 73 MAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIATLKQRYTQSNGR 126
>UniRef50_UPI0000D9E814 Cluster: PREDICTED: similar to proteasome
(prosome, macropain) subunit, alpha type, 8 isoform 2;
n=1; Macaca mulatta|Rep: PREDICTED: similar to
proteasome (prosome, macropain) subunit, alpha type, 8
isoform 2 - Macaca mulatta
Length = 261
Score = 37.1 bits (82), Expect = 1.2
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +3
Query: 36 SERYSFSLTTFSPSGKLVSXPSML*GLXADGGTSVGIXASNGVVIATENKHKSILYDEHS 215
+ RY ++T FSP G L + G T+VGI +N VV+ E K + L DE +
Sbjct: 2 ASRYDRAITVFSPDGHLFQVEYAQEAV-KKGSTAVGIRGTNIVVLGVEKKSVAKLQDERT 60
Query: 216 V 218
V
Sbjct: 61 V 61
>UniRef50_Q4QFV4 Cluster: Proteasome subunit alpha type; n=7;
Trypanosomatidae|Rep: Proteasome subunit alpha type -
Leishmania major
Length = 285
Score = 37.1 bits (82), Expect = 1.2
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +3
Query: 36 SERYSFSLTTFSPSGKLVSXPSML*GLXADGGTSVGIXASNGVVIATENKHKSILYDEHS 215
S RY TTFSP G+L + + GT +G+ +GVV+A E L+D +
Sbjct: 2 SHRYDSRTTTFSPEGRLYQVEYAVEAI-QQAGTVIGVCTKDGVVLAGEKMVPHPLFDSEN 60
Query: 216 V 218
+
Sbjct: 61 M 61
>UniRef50_Q23TC6 Cluster: Proteasome subunit alpha type 7-like,
putative; n=5; Oligohymenophorea|Rep: Proteasome subunit
alpha type 7-like, putative - Tetrahymena thermophila
SB210
Length = 242
Score = 37.1 bits (82), Expect = 1.2
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +2
Query: 260 YSGMXPDYRXLVXQAXKMXQQYYLLXHEPIPXXXMVQRVATVMXEYTQSGG 412
YSG+ PD R L A Q Y L + +P + + +A+V +YTQ G
Sbjct: 73 YSGLTPDARILTNIAKVECQSYSLNYDDRVPINYIARYIASVQQKYTQKSG 123
>UniRef50_Q8TAA3 Cluster: Proteasome subunit alpha type-7-like;
n=116; Eukaryota|Rep: Proteasome subunit alpha
type-7-like - Homo sapiens (Human)
Length = 256
Score = 37.1 bits (82), Expect = 1.2
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +3
Query: 36 SERYSFSLTTFSPSGKLVSXPSML*GLXADGGTSVGIXASNGVVIATENKHKSILYDEHS 215
+ RY ++T FSP G L + G T+VGI +N VV+ E K + L DE +
Sbjct: 2 ASRYDRAITVFSPDGHLFQVEYAQEAV-KKGSTAVGIRGTNIVVLGVEKKSVAKLQDERT 60
Query: 216 V 218
V
Sbjct: 61 V 61
Score = 35.5 bits (78), Expect = 3.8
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = +2
Query: 257 VYSGMXPDYRXLVXQAXKMXQQYYLLXHEPIPXXXMVQRVATVMXEYTQSGGR 415
++ G+ D R ++ +A Q + L +P+ + + +AT+ +YTQS GR
Sbjct: 80 IFIGLTADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGR 132
>UniRef50_Q09682 Cluster: Probable proteasome subunit alpha type-4;
n=5; Eukaryota|Rep: Probable proteasome subunit alpha
type-4 - Schizosaccharomyces pombe (Fission yeast)
Length = 248
Score = 36.7 bits (81), Expect = 1.6
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 263 SGMXPDYRXLVXQAXKMXQQYYLLXHEPIPXXXMVQRVATVMXEYTQSGG 412
+G+ D L+ A ++ QQY +E +P +V+RV + YTQ GG
Sbjct: 77 AGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGYTQYGG 126
>UniRef50_Q10329 Cluster: Probable proteasome subunit alpha type-7;
n=3; Ascomycota|Rep: Probable proteasome subunit alpha
type-7 - Schizosaccharomyces pombe (Fission yeast)
Length = 259
Score = 36.3 bits (80), Expect = 2.2
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 254 MVYSGMXPDYRXLVXQAXKMXQQYYLLXHEPIPXXXMVQRVATVMXEYTQSGG 412
+ ++G+ D R L+ +A Q + L +P+ + + VA V +YTQSGG
Sbjct: 72 LAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQSGG 124
>UniRef50_O81146 Cluster: Proteasome subunit alpha type-6-A; n=15;
Eukaryota|Rep: Proteasome subunit alpha type-6-A -
Arabidopsis thaliana (Mouse-ear cress)
Length = 246
Score = 35.9 bits (79), Expect = 2.9
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +3
Query: 30 RGSER-YSFSLTTFSPSGKLVSXPSML*GLXADGGTSVGIXASNGVVIATENKHKSILYD 206
RGS Y +T FSP G+L + G TS+G+ + V + T+ K L D
Sbjct: 3 RGSGAGYDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLD 62
Query: 207 EHSV 218
+ SV
Sbjct: 63 QSSV 66
>UniRef50_P34119 Cluster: Proteasome subunit alpha type-4; n=4;
Eukaryota|Rep: Proteasome subunit alpha type-4 -
Dictyostelium discoideum (Slime mold)
Length = 250
Score = 35.5 bits (78), Expect = 3.8
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +3
Query: 36 SERYSFSLTTFSPSGKLVSXPSML*GLXADGGTSVGIXASNGVVIATENKHKSILYD 206
+ RY T FSP G++ + + G T VGI A +G+V+A E K + L D
Sbjct: 2 ARRYDQRTTIFSPEGRVYQVEYAMTAIRHAGAT-VGILAKDGIVLAAEKKTTAKLLD 57
>UniRef50_UPI0000E49FB5 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 266
Score = 34.7 bits (76), Expect = 6.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 MVYSGMXPDYRXLVXQAXKMXQQYYLLXHEPIPXXXMVQRVATVMXEYTQSGGR 415
M ++G+ D R L+ +A Q + L +P+ + + +A + YTQS GR
Sbjct: 44 MAFAGLTADARILINRARIECQSHRLTVEDPVTVEYITRFMAQLKQRYTQSNGR 97
>UniRef50_Q5V2X8 Cluster: Proteasome subunit alpha 1; n=8;
Halobacteriaceae|Rep: Proteasome subunit alpha 1 -
Haloarcula marismortui (Halobacterium marismortui)
Length = 260
Score = 34.7 bits (76), Expect = 6.6
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +3
Query: 39 ERYSFSLTTFSPSGKLVSXPSML*GLXADGGTSVGIXASNGVVIATENKHKSILYDEHSV 218
+ Y +T FSP G+L + G S+G+ S+GVV+A + + +S L + SV
Sbjct: 8 QAYDRGITIFSPDGRLYQVEYAREAVKR-GTASIGVRTSDGVVLAVDKRIRSPLMERSSV 66
>UniRef50_O81148 Cluster: Proteasome subunit alpha type-4; n=5;
Magnoliophyta|Rep: Proteasome subunit alpha type-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 250
Score = 34.7 bits (76), Expect = 6.6
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 263 SGMXPDYRXLVXQAXKMXQQYYLLXHEPIPXXXMVQRVATVMXEYTQSGG 412
+G+ D L+ A Q+Y + EP+P +VQ + YTQ GG
Sbjct: 77 AGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDTKQGYTQFGG 126
Score = 34.3 bits (75), Expect = 8.8
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +3
Query: 36 SERYSFSLTTFSPSGKLVSXPSML*GLXADGGTSVGIXASNGVVIATENKHKSIL 200
S RY T FSP G+L + + + G+++GI + +GVV+ E K S L
Sbjct: 2 SRRYDSRTTIFSPEGRLYQVEYAMEAI-GNAGSAIGILSKDGVVLIGEKKVTSKL 55
>UniRef50_A0CZU2 Cluster: Chromosome undetermined scaffold_32, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_32,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 249
Score = 34.3 bits (75), Expect = 8.8
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +3
Query: 36 SERYSFSLTTFSPSGKLVSXPSML*GLXADGGTSVGIXASNGVVIATENKHKSILYDEHS 215
S RY TF+P G+L + + G+++G+ + G+++ATE + S L EHS
Sbjct: 2 SRRYDQKTNTFTPDGRLKQVEYAIEAIN-QTGSALGVLTNEGMILATEKQEVSHLL-EHS 59
>UniRef50_Q4JB24 Cluster: Proteasome subunit alpha; n=6;
Thermoprotei|Rep: Proteasome subunit alpha - Sulfolobus
acidocaldarius
Length = 242
Score = 34.3 bits (75), Expect = 8.8
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 260 YSGMXPDYRXLVXQAXKMXQQYYLLXHEPIPXXXMVQRVATVMXEYTQSGG 412
++G+ D R L+ A Q+ L+ EPI + + ++ V YTQ GG
Sbjct: 80 FAGLASDGRILIDYARSQALQHRLIYDEPISIEYLTKVISDVKQAYTQHGG 130
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 415,380,116
Number of Sequences: 1657284
Number of extensions: 4969465
Number of successful extensions: 7636
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 7453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7620
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 166151143700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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