Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_C05_e515_05.seq
(1467 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 200 6e-50
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 196 9e-49
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 184 5e-45
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 142 2e-32
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 141 4e-32
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 138 4e-31
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 118 4e-25
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 116 2e-24
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 96 2e-18
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 96 2e-18
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 96 2e-18
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 94 7e-18
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 93 2e-17
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 91 5e-17
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 91 7e-17
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 89 2e-16
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 67 3e-16
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 84 1e-14
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 80 1e-13
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 76 2e-12
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 75 4e-12
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 72 3e-11
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 71 6e-11
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 68 5e-10
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 65 5e-09
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 61 6e-08
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 60 1e-07
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 60 1e-07
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 59 3e-07
UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=... 59 3e-07
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 58 8e-07
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 58 8e-07
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 58 8e-07
UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2; ... 57 1e-06
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 57 1e-06
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 56 3e-06
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 52 3e-05
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 50 1e-04
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 45 0.006
UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaet... 42 0.041
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 42 0.041
UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole geno... 42 0.054
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 41 0.094
UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1; uncult... 41 0.094
UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lambl... 38 0.66
UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2; ... 36 2.0
UniRef50_Q9UAQ3 Cluster: Putative uncharacterized protein; n=2; ... 35 6.2
UniRef50_Q54YV0 Cluster: Putative uncharacterized protein; n=1; ... 35 6.2
UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1; S... 35 6.2
UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17; ... 34 8.2
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 200 bits (489), Expect = 6e-50
Identities = 100/151 (66%), Positives = 118/151 (78%), Gaps = 2/151 (1%)
Frame = +3
Query: 66 GHSIVLMGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQ 245
G ++VLMGKNTMMRKAI+ HLE NPA E+LLPHI+GNVGFVFT DL +VRD LL NKV
Sbjct: 49 GKAVVLMGKNTMMRKAIRGHLENNPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVP 108
Query: 246 APARPGAIAPLFVVIPAXNTGLGPEKTSXFQALSIPTKISKGTIEIINDVHILKPXXXVG 425
A AR GAIAP V +PA NTGLGPEKTS FQAL I TKIS+GTIEI++DV ++KP VG
Sbjct: 109 AAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKPGDKVG 168
Query: 426 AFEAXLLNMLNXXSL--FVWFLLAKQGYDSG 512
A EA LLNMLN ++ F + L+ +Q YD+G
Sbjct: 169 ASEATLLNMLNMLNISPFSYGLIIQQVYDNG 199
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 196 bits (479), Expect = 9e-49
Identities = 99/149 (66%), Positives = 116/149 (77%)
Frame = +3
Query: 66 GHSIVLMGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQ 245
G ++VLMGKNTMMRKAI+ HLE NPA EKLLPHI+GNVGFVFT DL ++RD LL NKV
Sbjct: 49 GKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVP 108
Query: 246 APARPGAIAPLFVVIPAXNTGLGPEKTSXFQALSIPTKISKGTIEIINDVHILKPXXXVG 425
A AR GAIAP V +PA NTGLGPEKTS FQAL I TKIS+GTIEI++DV ++K VG
Sbjct: 109 AAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVG 168
Query: 426 AFEAXLLNMLNXXSLFVWFLLAKQGYDSG 512
A EA LLNMLN S F + L+ +Q +D+G
Sbjct: 169 ASEATLLNMLN-ISPFSFGLVIQQVFDNG 196
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 184 bits (448), Expect = 5e-45
Identities = 90/149 (60%), Positives = 113/149 (75%)
Frame = +3
Query: 66 GHSIVLMGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQ 245
G + +LMGKNT +RKA++ HLE NP EK+LPH+KGN+GFVFT D+VD+R+ +L N+V
Sbjct: 49 GKATILMGKNTTIRKALRGHLEQNPNLEKVLPHVKGNIGFVFTHEDMVDIREIMLSNQVG 108
Query: 246 APARPGAIAPLFVVIPAXNTGLGPEKTSXFQALSIPTKISKGTIEIINDVHILKPXXXVG 425
APA+ GAIAP+ V +PA NTGLGPEKTS FQALSI TKIS+GTIEI+++VH++K VG
Sbjct: 109 APAKAGAIAPVDVFVPASNTGLGPEKTSFFQALSIATKISRGTIEILSEVHLIKIGEKVG 168
Query: 426 AFEAXLLNMLNXXSLFVWFLLAKQGYDSG 512
A EA LL ML F + L Q YDSG
Sbjct: 169 ASEATLLQMLKIFP-FTYGLKIVQVYDSG 196
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 142 bits (345), Expect = 2e-32
Identities = 74/151 (49%), Positives = 102/151 (67%), Gaps = 2/151 (1%)
Frame = +3
Query: 66 GHSIVLMGKNTMMRKAIKDHLET--NPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENK 239
G S+VLMGKNTMM+++++ H E N A LLP ++GNVG +FT GDL +V +++ + K
Sbjct: 49 GDSVVLMGKNTMMKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYK 108
Query: 240 VQAPARPGAIAPLFVVIPAXNTGLGPEKTSXFQALSIPTKISKGTIEIINDVHILKPXXX 419
V APAR G +AP+ VV+ NTGL P +TS FQ L+IPTKI+KGT+EII V ++K
Sbjct: 109 VGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDK 168
Query: 420 VGAFEAXLLNMLNXXSLFVWFLLAKQGYDSG 512
VG+ EA LL L F + L+ + YD+G
Sbjct: 169 VGSSEAALLAKLGIRP-FSYGLVVQSVYDNG 198
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 141 bits (342), Expect = 4e-32
Identities = 73/151 (48%), Positives = 102/151 (67%), Gaps = 2/151 (1%)
Frame = +3
Query: 66 GHSIVLMGKNTMMRKAIKDHLET--NPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENK 239
G S+VLMGKNTMM+++++ H + N A LLP ++GNVG +FT GDL +V +++ + K
Sbjct: 50 GDSVVLMGKNTMMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYK 109
Query: 240 VQAPARPGAIAPLFVVIPAXNTGLGPEKTSXFQALSIPTKISKGTIEIINDVHILKPXXX 419
V APAR G +AP+ VV+ NTGL P +TS FQ L+IPTKI+KGT+EII V ++K
Sbjct: 110 VGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDK 169
Query: 420 VGAFEAXLLNMLNXXSLFVWFLLAKQGYDSG 512
VG+ EA LL L F + L+ + YD+G
Sbjct: 170 VGSSEAALLAKLGIRP-FSYGLVVESVYDNG 199
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 138 bits (333), Expect = 4e-31
Identities = 70/144 (48%), Positives = 97/144 (67%)
Frame = +3
Query: 81 LMGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQAPARP 260
+MGKNT++RKAIK+ ET P E+LLPHIKGNVGF+FT GDL ++ KL E K +PA+
Sbjct: 61 VMGKNTLIRKAIKNQAETQPELEELLPHIKGNVGFIFTKGDLYQLKAKLTELKAPSPAKA 120
Query: 261 GAIAPLFVVIPAXNTGLGPEKTSXFQALSIPTKISKGTIEIINDVHILKPXXXVGAFEAX 440
G IAP V++PA +TGL P +T+ QAL+I +KI+KG IEI ++ ++K VG +A
Sbjct: 121 GVIAPNDVIVPAGDTGLDPTQTNFVQALNIASKITKGQIEITSETLLIKEGEKVGVSQAV 180
Query: 441 LLNMLNXXSLFVWFLLAKQGYDSG 512
LL L + F + + YD+G
Sbjct: 181 LLQKLK-INPFKYGAVIDVVYDNG 203
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 118 bits (284), Expect = 4e-25
Identities = 63/132 (47%), Positives = 83/132 (62%), Gaps = 1/132 (0%)
Frame = +3
Query: 66 GHSIVLMGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQ 245
G + +LMGKNT +R A+K +L+ P EKLLP +K N+GFVF DL ++R+ +L+NK
Sbjct: 49 GKATILMGKNTRIRTALKKNLQAVPQIEKLLPLVKLNMGFVFCKDDLSEIRNIILDNKSS 108
Query: 246 A-PARPGAIAPLFVVIPAXNTGLGPEKTSXFQALSIPTKISKGTIEIINDVHILKPXXXV 422
+ PAR G IAP+ V IP TG+ P TS ++L I TKI KG IEI VH++K V
Sbjct: 109 SHPARLGVIAPIDVFIPPGPTGMDPSHTSFLESLGISTKIVKGQIEIQEHVHLIKQGEKV 168
Query: 423 GAFEAXLLNMLN 458
A A LL N
Sbjct: 169 TASSATLLRKFN 180
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 116 bits (279), Expect = 2e-24
Identities = 63/149 (42%), Positives = 89/149 (59%)
Frame = +3
Query: 66 GHSIVLMGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQ 245
G VLMGK TM+RK I+D ++ P + L ++K N +F ++ +V+ + +V
Sbjct: 48 GIGAVLMGKKTMIRKVIRDLADSKPELDALNTYLKQNTCIIFCKDNIAEVKRVINTQRVG 107
Query: 246 APARPGAIAPLFVVIPAXNTGLGPEKTSXFQALSIPTKISKGTIEIINDVHILKPXXXVG 425
APA+ G AP V+IPA TG+ P +TS Q L I TKI++G I+I+N+VHI+K VG
Sbjct: 108 APAKAGVFAPNDVIIPAGPTGMEPTQTSFLQDLKIATKINRGQIDIVNEVHIIKTGQKVG 167
Query: 426 AFEAXLLNMLNXXSLFVWFLLAKQGYDSG 512
A EA LL LN F + L K YD+G
Sbjct: 168 ASEATLLQKLNIKP-FTYGLEPKIIYDAG 195
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 95.9 bits (228), Expect = 2e-18
Identities = 62/167 (37%), Positives = 96/167 (57%), Gaps = 17/167 (10%)
Frame = +3
Query: 63 SGHSIVLMGKNTMMRKAIKDHL------ETN-----------PAXEKLLPHIKGNVGFVF 191
S +S++LMG+NT+++ A++ + E++ P E L+ +KGN+G +F
Sbjct: 49 SNNSLMLMGENTLIKAALQKRISKPIESESDFEERSKTWTPIPHMEPLVRLLKGNLGIIF 108
Query: 192 TXGDLVDVRDKLLENKVQAPARPGAIAPLFVVIPAXNTGLGPEKTSXFQALSIPTKISKG 371
T DL D++D + + +APAR G++A V I A TGL P++T+ FQ L+IPTKI+K
Sbjct: 109 TNHDLTDIKDIIDRHTREAPARVGSVAQCDVWIKAGGTGLDPKQTAFFQNLAIPTKIAKA 168
Query: 372 TIEIINDVHILKPXXXVGAFEAXLLNMLNXXSLFVWFLLAKQGYDSG 512
IEI D I+ VG+ EA LL LN + F + L +D+G
Sbjct: 169 QIEISADKQIITEGEKVGSNEAALLQKLN-INPFSYKLSVAHVFDNG 214
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 95.9 bits (228), Expect = 2e-18
Identities = 58/149 (38%), Positives = 86/149 (57%)
Frame = +3
Query: 66 GHSIVLMGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQ 245
G++ +LMGKN+ +R+AI D P + +KG+V FVF G+ D++ + EN +
Sbjct: 73 GNAELLMGKNSAIRRAIADL--GKPELSGVYDLVKGDVCFVFFKGNARDIKKAIDENVRE 130
Query: 246 APARPGAIAPLFVVIPAXNTGLGPEKTSXFQALSIPTKISKGTIEIINDVHILKPXXXVG 425
A A+ G +A V + + TG+ P+KTS FQAL I TKI+KG +EII+ +L VG
Sbjct: 131 ACAKVGNVAQRDVWVESCITGMTPDKTSYFQALGIATKITKGKVEIISPYKVLSEGDKVG 190
Query: 426 AFEAXLLNMLNXXSLFVWFLLAKQGYDSG 512
+A LL MLN F + + Q Y+ G
Sbjct: 191 PSQANLLGMLNIKP-FCYKMTMHQIYEDG 218
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 95.9 bits (228), Expect = 2e-18
Identities = 59/154 (38%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Frame = +3
Query: 78 VLMGKNTMMRKAIKDHLETNPAX--EKLLPH-------IKGNVGFVFTXGDLVDVRDKLL 230
++MGK T+ +K ++ E A +KLL + + GN +FT ++ + L
Sbjct: 51 LVMGKKTLQKKIVERRAEDKKASAYDKLLYNTCIEKKLLCGNTALIFTNEEIPVITAVLD 110
Query: 231 ENKVQAPARPGAIAPLFVVIPAXNTGLGPEKTSXFQALSIPTKISKGTIEIINDVHILKP 410
+++VQAPAR GAIAP V++PA NTG+ P+ TS FQAL+I TKI+KGT+EI++D +L
Sbjct: 111 KHRVQAPARVGAIAPCDVIVPAGNTGMEPKATSFFQALNIATKIAKGTVEIVSDKKVLSV 170
Query: 411 XXXVGAFEAXLLNMLNXXSLFVWFLLAKQGYDSG 512
V A LL L+ S F + + + +D G
Sbjct: 171 GDRVDNSTATLLQKLD-ISPFYYQVEVQSVWDRG 203
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 94.3 bits (224), Expect = 7e-18
Identities = 50/116 (43%), Positives = 67/116 (57%)
Frame = +3
Query: 165 IKGNVGFVFTXGDLVDVRDKLLENKVQAPARPGAIAPLFVVIPAXNTGLGPEKTSXFQAL 344
+ G VGF+FT + D++ + ENKV+ PAR GA+AP+ VVIP TG+ P F AL
Sbjct: 100 VAGKVGFIFTDTPVFDLKPIIEENKVETPARVGAVAPIDVVIPPGPTGMDPASIQFFHAL 159
Query: 345 SIPTKISKGTIEIINDVHILKPXXXVGAFEAXLLNMLNXXSLFVWFLLAKQGYDSG 512
IPTKI KG I+I D +LK VG +A LL L F++ + YD+G
Sbjct: 160 QIPTKIEKGQIQITKDFVVLKTGQKVGQSQAVLLQKLGKKP-FLYGMEVLACYDNG 214
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 93.1 bits (221), Expect = 2e-17
Identities = 47/129 (36%), Positives = 74/129 (57%)
Frame = +3
Query: 72 SIVLMGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQAP 251
SI++ GKNT+++K ++D L+ + ++L I GNV F+FT D +++ L N +
Sbjct: 50 SILITGKNTLIKKVLRDRLKNSTLSNEILTKINGNVSFIFTNEDPFFIQEILKNNSLPTA 109
Query: 252 ARPGAIAPLFVVIPAXNTGLGPEKTSXFQALSIPTKISKGTIEIINDVHILKPXXXVGAF 431
A+ G +A V + T + P+ FQ+L+IPTKI KG IEII + +L+ +
Sbjct: 110 AKIGQVAQSDVYLSQGLTNISPDGIGIFQSLNIPTKILKGQIEIITNFKVLEKGKKINEA 169
Query: 432 EAXLLNMLN 458
EA LL LN
Sbjct: 170 EATLLQKLN 178
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 91.5 bits (217), Expect = 5e-17
Identities = 57/149 (38%), Positives = 83/149 (55%)
Frame = +3
Query: 66 GHSIVLMGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQ 245
G + +L GKNT++++ I + L+ + + LLP+IK NV FVFT GD + + K +
Sbjct: 52 GKAELLAGKNTIIKRVI-NQLDDDKL-KNLLPYIKLNVAFVFTNGDTSAILKAFKKTKRK 109
Query: 246 APARPGAIAPLFVVIPAXNTGLGPEKTSXFQALSIPTKISKGTIEIINDVHILKPXXXVG 425
A A+ G +AP VVI T GP++ + AL I TKI+KG IEI+N V+++K V
Sbjct: 110 AAAKAGIVAPADVVIEPMLTQSGPDQHGFYAALGIDTKINKGKIEIVNPVNLIKKGDIVT 169
Query: 426 AFEAXLLNMLNXXSLFVWFLLAKQGYDSG 512
A LL L F + + A YD G
Sbjct: 170 PSHATLLQRLEIDPFF-YAMSALNLYDDG 197
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 91.1 bits (216), Expect = 7e-17
Identities = 61/162 (37%), Positives = 86/162 (53%), Gaps = 17/162 (10%)
Frame = +3
Query: 78 VLMGKNTMMRKAIKDHL-ETN----------------PAXEKLLPHIKGNVGFVFTXGDL 206
+L GKNT++R +K L E N P E L+P ++GNV +F ++
Sbjct: 46 ILFGKNTLIRAGLKHRLTEPNAEDEDFEKRKNTWTPKPELEHLIPLLRGNVCLIFCHAEM 105
Query: 207 VDVRDKLLENKVQAPARPGAIAPLFVVIPAXNTGLGPEKTSXFQALSIPTKISKGTIEII 386
+V + E+KV A A+ G IAP V + TG+ P +TS FQAL I TKI KG I+I+
Sbjct: 106 GEVLSAVEESKVPAEAKAGTIAPNDVHVYPGPTGMDPSQTSFFQALGIFTKIVKGQIDIV 165
Query: 387 NDVHILKPXXXVGAFEAXLLNMLNXXSLFVWFLLAKQGYDSG 512
N++H++ VG EA LL L F + L K YD+G
Sbjct: 166 NELHLIFKDKKVGNSEAVLLKKLGVKP-FSFGLKVKNVYDNG 206
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 89.4 bits (212), Expect = 2e-16
Identities = 51/145 (35%), Positives = 76/145 (52%)
Frame = +3
Query: 78 VLMGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQAPAR 257
VL GKN++MR+A+ E P +L H+ G +FT G+ ++D + N + + A+
Sbjct: 55 VLFGKNSLMRRAVDQLKEELPGIRQLEEHLYHGAGLIFTNGNFKAIKDVIDANCLGSAAK 114
Query: 258 PGAIAPLFVVIPAXNTGLGPEKTSXFQALSIPTKISKGTIEIINDVHILKPXXXVGAFEA 437
GAIAP V++ T + P AL+I KI KGTIEI + ++ VGA EA
Sbjct: 115 VGAIAPCDVILQPQRTSMSPNDIKILHALNIQCKIFKGTIEITGEKQLIWEGQKVGASEA 174
Query: 438 XLLNMLNXXSLFVWFLLAKQGYDSG 512
+LN+L F + L + YD G
Sbjct: 175 NILNILGIMP-FKYTLKIEALYDHG 198
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 66.9 bits (156), Expect(2) = 3e-16
Identities = 31/46 (67%), Positives = 37/46 (80%)
Frame = +3
Query: 105 RKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKV 242
++AI+ HLE N KLLPHIK VGFVFT GDLV+VRDKL+E+KV
Sbjct: 692 QQAIRVHLEVNSDLRKLLPHIKSYVGFVFTKGDLVEVRDKLMESKV 737
Score = 42.3 bits (95), Expect(2) = 3e-16
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = +3
Query: 339 ALSIPTKISKGTIEIINDVHILK 407
ALSIP KISKGTIEIINDV ILK
Sbjct: 738 ALSIPIKISKGTIEIINDVPILK 760
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 83.8 bits (198), Expect = 1e-14
Identities = 54/164 (32%), Positives = 84/164 (51%), Gaps = 16/164 (9%)
Frame = +3
Query: 69 HSIVLMGKNTMMRKAIK---DHLETN-------------PAXEKLLPHIKGNVGFVFTXG 200
++I+++GKNT++RKA++ L T+ P L+PH+K + +VF
Sbjct: 52 NNIMVIGKNTVVRKAVQLKSADLPTDSKYDWYRQFGAPKPQLASLIPHLKNKIAYVFHND 111
Query: 201 DLVDVRDKLLENKVQAPARPGAIAPLFVVIPAXNTGLGPEKTSXFQALSIPTKISKGTIE 380
+ ++ K+ V APAR G +A V+IP TG+ P + + F ALSI TKI KG IE
Sbjct: 112 PIFALKPKIESFVVPAPARVGTVAQKDVMIPPGPTGMDPSQINFFHALSISTKIQKGQIE 171
Query: 381 IINDVHILKPXXXVGAFEAXLLNMLNXXSLFVWFLLAKQGYDSG 512
I +V + +G E LL +N F + + YD+G
Sbjct: 172 ITKEVQVCTKGKKIGNSEVSLLEKMNIQP-FSYGMKCFSDYDNG 214
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 80.2 bits (189), Expect = 1e-13
Identities = 45/129 (34%), Positives = 68/129 (52%), Gaps = 1/129 (0%)
Frame = +3
Query: 72 SIVLMGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQAP 251
+I+ M +NT+MR A+++ L+ P E LL +I+G V F+FT D + L E+K AP
Sbjct: 63 TIIRMSRNTLMRIALEEKLDERPELEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAP 122
Query: 252 ARPGAIAPLFVVIPAXNTGLGPEK-TSXFQALSIPTKISKGTIEIINDVHILKPXXXVGA 428
A+PG IAP +V+P T P S Q +P +I G + I D ++K +
Sbjct: 123 AKPGDIAPEDIVVPEGPTPFEPGPIVSELQQAGLPAQIQDGKVVITKDTVLVKEGEEIDE 182
Query: 429 FEAXLLNML 455
A +L L
Sbjct: 183 KTAEILKKL 191
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 76.2 bits (179), Expect = 2e-12
Identities = 45/104 (43%), Positives = 51/104 (49%)
Frame = -3
Query: 376 IVPFEILVGMERAWXKEVFSGPRPVLXAGMTTNNGAMAPGRAGAWTLFSNSLSRTSTRSP 197
+VP ILVG +AW KEV G PVL A ++GA AP AGA TL S
Sbjct: 1 MVPLAILVGTPKAWKKEVLPGSIPVLTALTQMSSGATAPALAGAATLLETITFLISVNGS 60
Query: 196 XVKTKPTFPLMXXXXXXXXXXXSRWSLMAFLIMVFLPMSTML*P 65
VKTKPT PL + LMA L MVFLP+ T P
Sbjct: 61 LVKTKPTLPLTKGNNFSKSGKSDKKPLMALLTMVFLPIKTTALP 104
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 75.4 bits (177), Expect = 4e-12
Identities = 43/129 (33%), Positives = 62/129 (48%)
Frame = -2
Query: 458 VQHVEKXSFKSSHXXXRLQDMDIIDNFNSTL*NLSGDGKSLEXRSLLRTKASVXSGNDDK 279
VQ V++ SF+S+ + D+++ DNFN T NL + +SLE RSL V N D
Sbjct: 148 VQQVQQRSFRSTDSLTSVNDLNVRDNFNGTSGNLGWNTQSLEERSLTWFHTGVDGENPDI 207
Query: 278 QWSNGSRXSRGLDFVLQQFITHINKISXGEDKANISLDVRKQFFXSWICFKMVLDGFPHH 99
W N + + V I + GED+ N++LD R+Q F W D H
Sbjct: 208 FWGNSTSSGWSGNLVGDDDFLDILQGIVGEDETNVTLDERQQLFVVWEVRDETSDSSSDH 267
Query: 98 GVFAHEHNA 72
GV H+ N+
Sbjct: 268 GVLTHQDNS 276
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 72.1 bits (169), Expect = 3e-11
Identities = 39/137 (28%), Positives = 71/137 (51%), Gaps = 1/137 (0%)
Frame = +3
Query: 66 GHSIVLMGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQ 245
GH +V + +N + A++ + + ++ ++ G GF+FT + D+ +++N V+
Sbjct: 61 GHGVVKVFRNKLFLIALR-RIYGDSVNAEIEKYLSGENGFIFTNENPFDLYRIIVDNSVR 119
Query: 246 APARPGAIAPLFVVIPAXNTGLGPEKT-SXFQALSIPTKISKGTIEIINDVHILKPXXXV 422
A+PG + +++PA NTG+ P S F L IPT+I G I + D + KP V
Sbjct: 120 RYAKPGDVLQSDIIVPAGNTGINPGPVLSRFSKLKIPTQIRDGKIWVARDTQVAKPGDTV 179
Query: 423 GAFEAXLLNMLNXXSLF 473
A LL ++N ++
Sbjct: 180 TPELADLLRLINVKPVY 196
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 71.3 bits (167), Expect = 6e-11
Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
Frame = +3
Query: 75 IVLMGKNTMMRKAIKDHLET--NPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQA 248
++ + +NT++ AIK + P EKL+ +I G + T + + L +N+ A
Sbjct: 51 LLRVSRNTLIELAIKKAAKELGKPELEKLVEYIDRGAGILVTNMNPFKLYKFLQQNRQPA 110
Query: 249 PARPGAIAPLFVVIPAXNTGLGPEK-TSXFQALSIPTKISKGTIEIINDVHILKPXXXVG 425
PA+PGA+ P VV+PA T L P QAL IP +I KG + I D +LK +
Sbjct: 111 PAKPGAVVPKDVVVPAGPTPLAPGPIVGQMQALGIPARIEKGKVTIQKDTTVLKAGEVIT 170
Query: 426 AFEAXLLNMLNXXSLFV 476
A +LN L L V
Sbjct: 171 PELANILNALGIQPLEV 187
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 68.1 bits (159), Expect = 5e-10
Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Frame = +3
Query: 36 RCNRSVFXCSGHSIVLMGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDV 215
+ +RS+ G S++ + KNT+ A+K+ T E + H++G +FT + ++
Sbjct: 48 KTSRSLLRSDG-SLMKVVKNTIFLLALKN---TGKYVEGIEEHLRGQNAVIFTNKNPFEI 103
Query: 216 RDKLLENKVQAPARPGAIAPLFVVIPAXNTGLGP-EKTSXFQALSIPTKISKGTIEIIND 392
L + K+ AR G IA +V+PA NTG+ P S F L IPT++ +G+I I D
Sbjct: 104 LFFLDKQKIMREARAGDIATSEIVLPAGNTGIPPGPMISNFNKLGIPTRVQEGSIWIAKD 163
Query: 393 VHILKPXXXVGAFEAXLLNML 455
+ KP + A LL+ L
Sbjct: 164 TVVAKPGDVISPELAELLSKL 184
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 64.9 bits (151), Expect = 5e-09
Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Frame = +3
Query: 90 KNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQAPARPGAI 269
K+ + RKA+ P +K++ + G F+FT + L +NK AR G I
Sbjct: 45 KDKVARKALAK--TDVPGMDKMMDQLTGQCMFMFTDISPFTLNVLLKKNKTMMAARAGDI 102
Query: 270 APLFVVIPAXNTGLGP-EKTSXFQALSIPTKISKGTIEIINDVHILKPXXXVGAFEAXLL 446
A + V +PA NTG+ P + F+ IPTKI +GTI I+ D +K +G A LL
Sbjct: 103 ASIDVTVPAKNTGIAPGPMLTEFKEAGIPTKIDQGTIWILKDTTPVKKGEPIGDKLAPLL 162
Query: 447 NMLN 458
L+
Sbjct: 163 GKLD 166
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 61.3 bits (142), Expect = 6e-08
Identities = 34/131 (25%), Positives = 65/131 (49%)
Frame = +3
Query: 66 GHSIVLMGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQ 245
G S +++GK + + ++++ + ++ N+G +FT +L + + + +
Sbjct: 44 GTSEIVVGKKSFLSYLLQNNKLEMSRWMSVKEYLSDNIGLIFTNSNLKILNETFKQYFLT 103
Query: 246 APARPGAIAPLFVVIPAXNTGLGPEKTSXFQALSIPTKISKGTIEIINDVHILKPXXXVG 425
+ G IA ++I L P +T FQAL IPT+ISK +IEII D+ ++ +
Sbjct: 104 SFVNAGEIAQRNIIIKKGIKNLSPSQTPFFQALGIPTRISKSSIEIIEDILLVSKNQALN 163
Query: 426 AFEAXLLNMLN 458
+ LL L+
Sbjct: 164 KSQEVLLKKLD 174
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 60.5 bits (140), Expect = 1e-07
Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
Frame = +3
Query: 90 KNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQAPARPGAI 269
KN ++RKA + P +++ + G+ F+FT + + K+ + + APA+PG +
Sbjct: 68 KNNLVRKAFEQSGIEMP--KEMDEQLVGSNMFIFTNDNPFKLALKISKFSMPAPAKPGDV 125
Query: 270 APLFVVIPAXNTGLGPEK-TSXFQALSIPTKISKGTIEIINDVHILKPXXXVGAFEAXLL 446
A +V+PA +TGL P S F L I T + GTI I D + KP + A LL
Sbjct: 126 AQSEIVVPAGDTGLTPGPILSTFGKLKIKTMVKGGTIHIAKDTVVAKPGDVISPELASLL 185
Query: 447 NML 455
L
Sbjct: 186 QKL 188
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 60.5 bits (140), Expect = 1e-07
Identities = 35/91 (38%), Positives = 52/91 (57%)
Frame = +3
Query: 39 CNRSVFXCSGHSIVLMGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVR 218
C S F C S+ M K+++ +A K NP L+P + GNVG +FT GDL +
Sbjct: 29 CVPSYFLC--FSVFAMVKHSIRLRAEKTG---NPVFLNLVPLLVGNVGPIFTKGDLKEAD 83
Query: 219 DKLLENKVQAPARPGAIAPLFVVIPAXNTGL 311
+++ + KV APA G +A + V++P NTGL
Sbjct: 84 EEVAKYKVGAPAHTGLVAHIDVIVPPGNTGL 114
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 59.3 bits (137), Expect = 3e-07
Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Frame = +3
Query: 90 KNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQAPARPGAI 269
K+ + +KA+++ P + ++ KG V +FT + L +NK+ AR G I
Sbjct: 59 KDKVAQKALEN--SDIPGMKDMIGEFKGQVMIMFTNMSPFKLNVLLAKNKIMMMARGGDI 116
Query: 270 APLFVVIPAXNTGLGP-EKTSXFQALSIPTKISKGTIEIIND 392
A + VV+PA NTG+ P + F+ IPTKI +GTI I D
Sbjct: 117 ASVDVVVPAKNTGIAPGPMLTEFKEAGIPTKIDQGTIWIAKD 158
>UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Pyrobaculum|Rep: Acidic ribosomal protein P0 homolog -
Pyrobaculum aerophilum
Length = 345
Score = 59.3 bits (137), Expect = 3e-07
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Frame = +3
Query: 69 HSIVLMGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQA 248
+ ++ + K T+ + A PA ++ ++G VGF FT + +V + EN V+
Sbjct: 60 YGVIKIIKPTLFKIAFTKVYGGIPA--EIAEKVRGEVGFFFTSFNPAEVIKIVAENSVRR 117
Query: 249 PARPGAIAPLFVVIPAXNTGLGPEK-TSXFQALSIPTKISKGTIEIINDVHILKPXXXVG 425
A+PG AP +V+PA T P S F L IPT++ +G I I D + K +
Sbjct: 118 AAQPGDKAPFDIVVPAGPTNASPGPIISKFGKLKIPTRVQEGKIWIAKDTVVAKAGQEIT 177
Query: 426 AFEAXLLNMLNXXSLF 473
A +L ++ +F
Sbjct: 178 PEMAEVLRVVGIEPIF 193
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 57.6 bits (133), Expect = 8e-07
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = +3
Query: 135 NPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQAPARPGAIAPLFVVIPAXNTGL 311
NP L+P + GNVG +FT GDL +V +++ + KV APAR G +A + V++P NT L
Sbjct: 15 NPVFLNLVPLLVGNVGPIFTKGDLKEVDEEVAKYKVGAPARTGLVAHIDVIVPPGNTXL 73
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 57.6 bits (133), Expect = 8e-07
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 1/130 (0%)
Frame = +3
Query: 69 HSIVLMGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQA 248
++I+ M + ++ A+++ E L +++G VFT + + L ++K +A
Sbjct: 48 NAILKMSRKNFIKIALEN--SDKEEVEGLADYLEGQPAMVFTKMNPFKLFKILEDSKTEA 105
Query: 249 PARPGAIAPLFVVIPAXNTGLGPEK-TSXFQALSIPTKISKGTIEIINDVHILKPXXXVG 425
PA+ G+IAP +V+PA +T P Q + IP KI KG+I + +D I+ +
Sbjct: 106 PAKAGSIAPADIVVPAGDTSFPPGPILGELQQVGIPAKIDKGSIVVTDDAKIVDEGEEIP 165
Query: 426 AFEAXLLNML 455
A +L L
Sbjct: 166 KAVADILTKL 175
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 57.6 bits (133), Expect = 8e-07
Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Frame = +3
Query: 84 MGKNTMMRKAIKDHLET--NPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQAPAR 257
M +NT++++A+++ E NP KL+ ++ V T + + L E+K AP +
Sbjct: 59 MSRNTLIKRAVEEVAEETGNPEFAKLVDYLDKGAAIVVTEMNPFKLFKTLEESKSPAPIK 118
Query: 258 PGAIAPLFVVIPAXNTGLGPEK-TSXFQALSIPTKISKGTIEIINDVHILKPXXXVGAFE 434
GAIAP + + + +TG+ P S +A+ IP I KG I I D + K +
Sbjct: 119 GGAIAPCDIEVKSGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKEDKVVAKEGDVISPKL 178
Query: 435 AXLLNML 455
A +L+ L
Sbjct: 179 AVVLSAL 185
>UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 742
Score = 57.2 bits (132), Expect = 1e-06
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = +3
Query: 75 IVLMGKNTMMRKAIKDHLET--NPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQA 248
+V + K + + + H E NP L+P + GNVG + T GDL +V ++ + KV A
Sbjct: 590 LVWLPKRLFSQHSSRLHAEKTGNPVFLNLVPLLVGNVGLISTKGDLKEVDKEVAKYKVGA 649
Query: 249 PARPGAIAPLFVVIPAXNTGL 311
PAR G ++ + V++P NTGL
Sbjct: 650 PARAGLVSHIDVIVPPGNTGL 670
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 56.8 bits (131), Expect = 1e-06
Identities = 29/110 (26%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Frame = +3
Query: 66 GHSIVLMGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQ 245
G + + M +NT++ +A++ E + L +++G VG V T + + +L +K
Sbjct: 55 GQAALRMSRNTLLVRALE---EAGDGLDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTP 111
Query: 246 APARPGAIAPLFVVIPAXNTGLGPEK-TSXFQALSIPTKISKGTIEIIND 392
AP G +AP +V+P +TG+ P Q + +I +G+I++++D
Sbjct: 112 APINAGEVAPNDIVVPEGDTGIDPGPFVGELQTIGANARIQEGSIQVLDD 161
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 55.6 bits (128), Expect = 3e-06
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 3/152 (1%)
Frame = +3
Query: 66 GHSIVLMGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLEN-KV 242
G + + + KNT+ + A K+ EKL ++ G F+FT D + + EN K+
Sbjct: 56 GKATIKVTKNTLFKIAAKN---AGIDIEKLEQYLTGPNVFIFTK-DNPFITNMFFENYKL 111
Query: 243 QAPARPGAIAPLFVVIPAXNTGL--GPEKTSXFQALSIPTKISKGTIEIINDVHILKPXX 416
+ A PG A VVIPA +TG+ GP S F L + TK+ G + ++ D + KP
Sbjct: 112 RRYAMPGDKAEEEVVIPAGDTGMPAGP-ILSVFGKLKVQTKVQDGKVHVVKDTVVAKPGD 170
Query: 417 XVGAFEAXLLNMLNXXSLFVWFLLAKQGYDSG 512
+ A +L L ++V L K Y G
Sbjct: 171 VIPAEALPILQKLGIMPVYV-KLKIKVAYHEG 201
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 52.4 bits (120), Expect = 3e-05
Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
Frame = +3
Query: 84 MGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQAPARPG 263
+ KN ++ +A+++ E+LL G +FT + ++ L + K + +PG
Sbjct: 61 VSKNKLILRALRNAGIDTSKFEELLT---GQNLLLFTHMNAFELSLLLDKYKAKTYYKPG 117
Query: 264 AIAPLFVVIPAXNTGLGPEK-TSXFQALSIPTKISKGTIEIINDVHILKPXXXVGAFEAX 440
IA +VIP NTGL P S F L IPT+I +I I D + KP + A
Sbjct: 118 EIAQQEIVIPEGNTGLSPGPILSTFSKLKIPTRIQGNSIVITRDTVVAKPGDTISEELAS 177
Query: 441 LLNMLNXXSLFVWFLLAKQGYDSG 512
LL L+ +L + K YD G
Sbjct: 178 LLQRLD-IALKEVKINIKAAYDHG 200
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 50.4 bits (115), Expect = 1e-04
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +3
Query: 192 TXGDLVDVRDKLLENKVQAPARPGAIAPLFVVIPAXNTGL--GPEKTSXFQALSIPTKIS 365
T ++ + +E+KV P + G IAP +VIP T + GP +T +AL + TK++
Sbjct: 86 TNENIFKIAKIFMEHKVNVPIKAGEIAPKDIVIPKGITNIPVGPIQTE-LRALGVKTKVT 144
Query: 366 KGTIEIINDVHILKPXXXVGAFEAXLLNML 455
G IEI+ D ++K V A +L L
Sbjct: 145 SGKIEIVEDAVVVKEGEIVSPKVANVLQTL 174
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 44.8 bits (101), Expect = 0.006
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 1/147 (0%)
Frame = +3
Query: 66 GHSIVLMGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQ 245
G + V M +NT++ A+ E + L H +G +FT + + L + K +
Sbjct: 51 GTARVKMARNTLIEHALN---ELGGSVATLNDHAEGQSALIFTNENPFKLFKLLEKTKTK 107
Query: 246 APARPGAIAPLFVVIPAXNTGLGPEK-TSXFQALSIPTKISKGTIEIINDVHILKPXXXV 422
A+PG AP +VIP T P Q + IP I G ++I ++K +
Sbjct: 108 MAAKPGETAPEDIVIPKGPTSFKPGPIVGELQQVGIPAAIEGGKVKIRETKTVVKKGEVI 167
Query: 423 GAFEAXLLNMLNXXSLFVWFLLAKQGY 503
A L L + V +L Y
Sbjct: 168 NKKVAEALVKLGVKPMDVGLILQAAYY 194
>UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaeta
thermophila PT|Rep: Ribosomal protein L10 - Methanosaeta
thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 321
Score = 41.9 bits (94), Expect = 0.041
Identities = 30/129 (23%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
Frame = +3
Query: 72 SIVLMGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQAP 251
S V + N + R+AI L+++ + L+ +I+ +F+ + ++ L K P
Sbjct: 56 SEVRVVNNNIARRAI---LKSDESIRPLVDYIEDQTALIFSDANPFALKKMLDAEKRPMP 112
Query: 252 ARPGAIAPLFVVIPAXNTGLGP-EKTSXFQALSIPTKISKGTIEIINDVHILKPXXXVGA 428
+ GA+AP+ +V+ + T P Q+ IP I G + I V + K +
Sbjct: 113 IKAGAVAPVDIVVESGETSFSPGPMVGKLQSAGIPAAIKGGKVVINQRVVLAKQGDVITP 172
Query: 429 FEAXLLNML 455
A +L ++
Sbjct: 173 KVAEVLKLM 181
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 41.9 bits (94), Expect = 0.041
Identities = 33/148 (22%), Positives = 61/148 (41%), Gaps = 1/148 (0%)
Frame = +3
Query: 72 SIVLMGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQAP 251
+++ + +NT+ +A+ E+ P ++ ++ +FT + L + K +P
Sbjct: 56 AVLKVSRNTLTERALNQLGESIP---EMTRYLDNQTALIFTNESPFKLYKLLEQTKTPSP 112
Query: 252 ARPGAIAPLFVVIPAXNTGLGPEK-TSXFQALSIPTKISKGTIEIINDVHILKPXXXVGA 428
+ GAIAP +++ T P Q+ IP I G + + + K V
Sbjct: 113 IKAGAIAPEDIIVQKGPTSFPPGPILGELQSAGIPASIDAGKVAVKETKVVCKAGEAVPQ 172
Query: 429 FEAXLLNMLNXXSLFVWFLLAKQGYDSG 512
A +L+ L L V L + YD G
Sbjct: 173 KLATMLSKLEIYPLIVGLDL-RAAYDDG 199
>UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 105
Score = 41.5 bits (93), Expect = 0.054
Identities = 23/46 (50%), Positives = 27/46 (58%)
Frame = -3
Query: 307 PVLXAGMTTNNGAMAPGRAGAWTLFSNSLSRTSTRSPXVKTKPTFP 170
PVL G T+ A P RAGA TL+ + S TS +SP VK PT P
Sbjct: 17 PVLPGGAMTSIWATNPVRAGAPTLYLATSSSTSFKSPFVKIGPTLP 62
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 40.7 bits (91), Expect = 0.094
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Frame = +3
Query: 66 GHSIVLMGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQ 245
G +++ + KN+M+ ++ ++ I + +FT D + L + K+
Sbjct: 51 GDALLKVSKNSMIARSFG-----GSGMNDMVDFIDDQMALIFTDLDAFALYKVLEKGKIP 105
Query: 246 APARPGAIAPLFVVIPAXNTGLGP-EKTSXFQALSIPTKISKGTIEI 383
AP + GA+AP+ +VI T L P Q L IP+ I G + +
Sbjct: 106 APIKAGAVAPIDIVIEEGPTSLRPGPVVGELQNLGIPSGIDGGKVVV 152
>UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L10E - Uncultured methanogenic archaeon RC-I
Length = 304
Score = 40.7 bits (91), Expect = 0.094
Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 1/125 (0%)
Frame = +3
Query: 84 MGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQAPARPG 263
M +NT+ A D L ++L ++ G + V+T + + L K + A+ G
Sbjct: 62 MVRNTLSTIAF-DSLPEGEKAKELAKYVDGQMLIVYTNDNPFKLYKLLNATKSKRAAKGG 120
Query: 264 AIAPLFVVIPAXNTGLGP-EKTSXFQALSIPTKISKGTIEIINDVHILKPXXXVGAFEAX 440
IAP +VIP T P FQ + IP I G + I + ++K + A A
Sbjct: 121 DIAPSDIVIPKGPTSFKPGPLVGEFQQVGIPAGIEGGKVVIKDTKTVVKQGEKISAKLAE 180
Query: 441 LLNML 455
L L
Sbjct: 181 ALTRL 185
>UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_32992_33747 - Giardia lamblia
ATCC 50803
Length = 251
Score = 37.9 bits (84), Expect = 0.66
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 7/134 (5%)
Frame = +3
Query: 66 GHSIVLMGKNTMMRKAIKDHLETNPAXE--KLLPHIKGNVGFVFTXGDLVDVRDKLLENK 239
G++ + MGKN +MR A+ E + + +L +KG G +FT VR L
Sbjct: 72 GYARIFMGKNQLMRYALGKTEEESYRTKTWQLGRLLKGMTGLLFTSAPEEKVRSALASVA 131
Query: 240 VQAPARPGAIAPLFVVIPAXNTGLGPEKTS-----XFQALSIPTKISKGTIEIINDVHIL 404
AR G +A +VIP L +K S + L +PT + I ++ D +
Sbjct: 132 RPCLARGGDVATKTIVIP--QGPLDRDKYSFALEPELRKLGLPTSLQNTVIHVLCDHVLC 189
Query: 405 KPXXXVGAFEAXLL 446
K + + +A LL
Sbjct: 190 KEGDVLTSAQARLL 203
>UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 220
Score = 36.3 bits (80), Expect = 2.0
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 3/129 (2%)
Frame = +3
Query: 69 HSIVLMGKNTMMRKAIKDHLETNPAXE--KLLPHIKGNVGFVFTXGDLVDVRDKLLENKV 242
+S GKN ++ A+ A + K +KG G +FT +V + E
Sbjct: 63 NSRFFFGKNNVISIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSKKEVEAEFSEASE 122
Query: 243 QAPARPGAIAPLFVVIP-AXNTGLGPEKTSXFQALSIPTKISKGTIEIINDVHILKPXXX 419
+ AR G +A VV+P + + L +PTK+ KG I + + K
Sbjct: 123 EDYARVGDVATETVVLPEGPISQFAFSMEPQLRKLGLPTKLDKGVITLYQQFEVCKEGEP 182
Query: 420 VGAFEAXLL 446
+ +A +L
Sbjct: 183 LTVEQAKIL 191
>UniRef50_Q9UAQ3 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 765
Score = 34.7 bits (76), Expect = 6.2
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 27 LCNRCNRSVFXCSGHSIVLMGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVG 182
+CN C + + C +SIV N M+ I+ +L +P L P G+ G
Sbjct: 142 VCNSCQKPSYFCDENSIVSAPTNLAMQNVIRRYLLAHPDKAFLTPSCSGSSG 193
>UniRef50_Q54YV0 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 697
Score = 34.7 bits (76), Expect = 6.2
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = +2
Query: 23 MALQQMQQIRISXQWSQHCAHGQKHHDEESHQGPS*NKSSXRKTASSHQ 169
M LQQ QQ Q QH H Q HH + Q P N + HQ
Sbjct: 425 MNLQQQQQHPQHPQHQQHQQHQQHHHQQHQQQPPHPNSHPQHPNQNPHQ 473
>UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1;
Schizosaccharomyces pombe|Rep: mRNA turnover protein 4
homolog - Schizosaccharomyces pombe (Fission yeast)
Length = 241
Score = 34.7 bits (76), Expect = 6.2
Identities = 30/78 (38%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +3
Query: 72 SIVLMGKNTMMRKAIKDHLETNPAXE--KLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQ 245
S + MGK +M KA+ E A KL + G VG +FT +V E+ VQ
Sbjct: 63 SRIFMGKTKVMAKALGHTPEEEHAENVSKLTKLLHGAVGLLFTNSKPDEVIG-YFESFVQ 121
Query: 246 AP-ARPGAIAPLFVVIPA 296
AR GA+AP VIPA
Sbjct: 122 NDFARAGAVAPFTHVIPA 139
>UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17;
Ascomycota|Rep: mRNA turnover protein 4 homolog -
Neurospora crassa
Length = 252
Score = 34.3 bits (75), Expect = 8.2
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +3
Query: 78 VLMGKNTMMRKAIKDHLETNPAX--EKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQAP 251
+ GK + +A+ E A +KL ++ G+VG +FT D +++D +
Sbjct: 65 IFFGKTKLTARALGTTPEDAQADGLDKLSKYLSGSVGLIFTNRDPSEIKDYFVNLTQVDF 124
Query: 252 ARPGAIAPLFVVIPA 296
AR G++A + IP+
Sbjct: 125 ARAGSVATRTITIPS 139
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,925,050
Number of Sequences: 1657284
Number of extensions: 10861417
Number of successful extensions: 25848
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 24860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25803
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 154859318400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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