Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_C05_e515_05.seq
         (1467 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair pro...   229   6e-60
BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p pro...   229   6e-60
AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p pro...   229   6e-60
AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA...   229   6e-60

>M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair
           protein protein.
          Length = 317

 Score =  229 bits (561), Expect = 6e-60
 Identities = 116/149 (77%), Positives = 125/149 (83%)
 Frame = +3

Query: 66  GHSIVLMGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQ 245
           G ++VLMGKNTMMRKAI+ HLE NP  EKLLPHIKGNVGFVFT GDL +VRDKLLE+KV+
Sbjct: 49  GLAVVLMGKNTMMRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVR 108

Query: 246 APARPGAIAPLFVVIPAXNTGLGPEKTSXFQALSIPTKISKGTIEIINDVHILKPXXXVG 425
           APARPGAIAPL V+IPA NTGLGPEKTS FQALSIPTKISKGTIEIINDV ILKP   VG
Sbjct: 109 APARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVG 168

Query: 426 AFEAXLLNMLNXXSLFVWFLLAKQGYDSG 512
           A EA LLNMLN  S F + L+  Q YDSG
Sbjct: 169 ASEATLLNMLN-ISPFSYGLIVNQVYDSG 196


>BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p
           protein.
          Length = 317

 Score =  229 bits (561), Expect = 6e-60
 Identities = 116/149 (77%), Positives = 125/149 (83%)
 Frame = +3

Query: 66  GHSIVLMGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQ 245
           G ++VLMGKNTMMRKAI+ HLE NP  EKLLPHIKGNVGFVFT GDL +VRDKLLE+KV+
Sbjct: 49  GLAVVLMGKNTMMRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVR 108

Query: 246 APARPGAIAPLFVVIPAXNTGLGPEKTSXFQALSIPTKISKGTIEIINDVHILKPXXXVG 425
           APARPGAIAPL V+IPA NTGLGPEKTS FQALSIPTKISKGTIEIINDV ILKP   VG
Sbjct: 109 APARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVG 168

Query: 426 AFEAXLLNMLNXXSLFVWFLLAKQGYDSG 512
           A EA LLNMLN  S F + L+  Q YDSG
Sbjct: 169 ASEATLLNMLN-ISPFSYGLIVNQVYDSG 196


>AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p
           protein.
          Length = 317

 Score =  229 bits (561), Expect = 6e-60
 Identities = 116/149 (77%), Positives = 125/149 (83%)
 Frame = +3

Query: 66  GHSIVLMGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQ 245
           G ++VLMGKNTMMRKAI+ HLE NP  EKLLPHIKGNVGFVFT GDL +VRDKLLE+KV+
Sbjct: 49  GLAVVLMGKNTMMRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVR 108

Query: 246 APARPGAIAPLFVVIPAXNTGLGPEKTSXFQALSIPTKISKGTIEIINDVHILKPXXXVG 425
           APARPGAIAPL V+IPA NTGLGPEKTS FQALSIPTKISKGTIEIINDV ILKP   VG
Sbjct: 109 APARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVG 168

Query: 426 AFEAXLLNMLNXXSLFVWFLLAKQGYDSG 512
           A EA LLNMLN  S F + L+  Q YDSG
Sbjct: 169 ASEATLLNMLN-ISPFSYGLIVNQVYDSG 196


>AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA
           protein.
          Length = 317

 Score =  229 bits (561), Expect = 6e-60
 Identities = 116/149 (77%), Positives = 125/149 (83%)
 Frame = +3

Query: 66  GHSIVLMGKNTMMRKAIKDHLETNPAXEKLLPHIKGNVGFVFTXGDLVDVRDKLLENKVQ 245
           G ++VLMGKNTMMRKAI+ HLE NP  EKLLPHIKGNVGFVFT GDL +VRDKLLE+KV+
Sbjct: 49  GLAVVLMGKNTMMRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVR 108

Query: 246 APARPGAIAPLFVVIPAXNTGLGPEKTSXFQALSIPTKISKGTIEIINDVHILKPXXXVG 425
           APARPGAIAPL V+IPA NTGLGPEKTS FQALSIPTKISKGTIEIINDV ILKP   VG
Sbjct: 109 APARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVG 168

Query: 426 AFEAXLLNMLNXXSLFVWFLLAKQGYDSG 512
           A EA LLNMLN  S F + L+  Q YDSG
Sbjct: 169 ASEATLLNMLN-ISPFSYGLIVNQVYDSG 196


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,860,386
Number of Sequences: 53049
Number of extensions: 529517
Number of successful extensions: 1740
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1713
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8128022400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)