Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_C04_e507_06.seq
(1503 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P09234 Cluster: U1 small nuclear ribonucleoprotein C; n... 140 1e-31
UniRef50_A6NK15 Cluster: Uncharacterized protein ENSP00000305492... 133 1e-29
UniRef50_Q84VV2 Cluster: At4g03120; n=7; Viridiplantae|Rep: At4g... 88 5e-16
UniRef50_Q54YA5 Cluster: Putative uncharacterized protein; n=1; ... 83 1e-14
UniRef50_Q0UP28 Cluster: Putative uncharacterized protein; n=1; ... 77 2e-12
UniRef50_Q5KC16 Cluster: U1 small nuclear ribonucleoprotein, put... 69 4e-10
UniRef50_Q4P2Q5 Cluster: Putative uncharacterized protein; n=1; ... 69 4e-10
UniRef50_Q9P794 Cluster: U1 snRNP-associated protein Usp103; n=1... 68 6e-10
UniRef50_Q5YEU6 Cluster: U1 small nuclear ribonucleoprotein; n=1... 63 2e-08
UniRef50_Q01EB2 Cluster: U1snrC U1 small nuclear ribonucleoprote... 63 2e-08
UniRef50_Q22NU5 Cluster: U1 zinc finger family protein; n=1; Tet... 62 4e-08
UniRef50_A3LW12 Cluster: Predicted protein; n=2; Saccharomycetal... 61 6e-08
UniRef50_Q8IAW3 Cluster: Putative uncharacterized protein PF08_0... 60 1e-07
UniRef50_Q4UJ14 Cluster: RNA-binding protein (U1 snRNP-like), pu... 60 1e-07
UniRef50_A5JZQ2 Cluster: Putative uncharacterized protein; n=2; ... 60 2e-07
UniRef50_A7AMW3 Cluster: U1 zinc finger family protein; n=1; Bab... 59 3e-07
UniRef50_A0CQS0 Cluster: Chromosome undetermined scaffold_24, wh... 59 3e-07
UniRef50_A5DWZ7 Cluster: Putative uncharacterized protein; n=1; ... 58 6e-07
UniRef50_Q75ED9 Cluster: AAR142Cp; n=1; Eremothecium gossypii|Re... 58 8e-07
UniRef50_Q5CQ56 Cluster: Putative uncharacterized protein; n=1; ... 57 1e-06
UniRef50_A7TPD7 Cluster: Putative uncharacterized protein; n=1; ... 54 7e-06
UniRef50_Q1EA57 Cluster: Predicted protein; n=12; Pezizomycotina... 54 1e-05
UniRef50_Q05900 Cluster: U1 small nuclear ribonucleoprotein C ho... 53 2e-05
UniRef50_Q6FR68 Cluster: Candida glabrata strain CBS138 chromoso... 52 5e-05
UniRef50_Q6CUF7 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 50 2e-04
UniRef50_UPI0000499CBA Cluster: hypothetical protein 13.t00050; ... 49 4e-04
UniRef50_Q8SR72 Cluster: U1 SMALL NUCLEAR RIBONUCLEOPROTEIN; n=1... 47 0.001
UniRef50_A2D8V0 Cluster: U1 zinc finger family protein; n=1; Tri... 46 0.003
UniRef50_A7RM68 Cluster: Predicted protein; n=1; Nematostella ve... 42 0.055
UniRef50_UPI0000E822A2 Cluster: PREDICTED: hypothetical protein;... 40 0.17
UniRef50_A7PRL0 Cluster: Chromosome chr14 scaffold_27, whole gen... 40 0.17
UniRef50_A7S772 Cluster: Predicted protein; n=1; Nematostella ve... 40 0.22
UniRef50_O60138 Cluster: WW domain-binding protein 4; n=1; Schiz... 39 0.30
UniRef50_O75554 Cluster: WW domain-binding protein 4; n=24; Eute... 39 0.30
UniRef50_A2EI42 Cluster: U1 zinc finger family protein; n=1; Tri... 38 0.90
UniRef50_UPI00015B5423 Cluster: PREDICTED: hypothetical protein;... 37 1.2
UniRef50_UPI00003C02D8 Cluster: PREDICTED: hypothetical protein ... 37 1.6
UniRef50_Q17AZ1 Cluster: Putative uncharacterized protein; n=1; ... 37 1.6
UniRef50_Q16G73 Cluster: Putative uncharacterized protein; n=2; ... 37 1.6
UniRef50_UPI0000584055 Cluster: PREDICTED: similar to Zinc finge... 36 2.1
UniRef50_Q86F30 Cluster: Clone ZZD1160 mRNA sequence; n=1; Schis... 36 2.1
UniRef50_UPI00015B57F7 Cluster: PREDICTED: similar to conserved ... 36 2.8
UniRef50_UPI00003C0427 Cluster: PREDICTED: similar to zinc finge... 36 2.8
UniRef50_UPI00006614D0 Cluster: Homolog of Gallus gallus "Nuclea... 36 2.8
UniRef50_Q5KLZ9 Cluster: Putative uncharacterized protein; n=2; ... 36 2.8
UniRef50_Q55HM5 Cluster: Putative uncharacterized protein; n=2; ... 36 2.8
UniRef50_A0NER7 Cluster: ENSANGP00000031624; n=2; Culicidae|Rep:... 36 3.6
UniRef50_Q501Z8 Cluster: Zgc:112384; n=3; Danio rerio|Rep: Zgc:1... 35 6.4
UniRef50_A4LPM8 Cluster: DNA-binding HTH domain-containing prote... 35 6.4
UniRef50_A7RG76 Cluster: Predicted protein; n=1; Nematostella ve... 35 6.4
UniRef50_A2FSM2 Cluster: Putative uncharacterized protein; n=1; ... 35 6.4
UniRef50_UPI000065E146 Cluster: WW domain-binding protein 4 (WBP... 34 8.4
UniRef50_Q3LW59 Cluster: Putative uncharacterized protein; n=1; ... 34 8.4
UniRef50_Q1E756 Cluster: Putative uncharacterized protein; n=1; ... 34 8.4
UniRef50_Q5UX77 Cluster: Putative uncharacterized protein; n=1; ... 34 8.4
>UniRef50_P09234 Cluster: U1 small nuclear ribonucleoprotein C;
n=36; Bilateria|Rep: U1 small nuclear ribonucleoprotein
C - Homo sapiens (Human)
Length = 159
Score = 140 bits (338), Expect = 1e-31
Identities = 62/80 (77%), Positives = 66/80 (82%), Gaps = 3/80 (3%)
Frame = +1
Query: 118 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLIDATTAAFKAG 297
MPK+YCDYCDTYLTHDSPSVRKTHC+GRKHK+NVK YYQKWMEEQAQ LID TTAAF+ G
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG 60
Query: 298 KIAQNPFGT---KGASIPPP 348
KI PF GA IPPP
Sbjct: 61 KIPPTPFSAPPPAGAMIPPP 80
>UniRef50_A6NK15 Cluster: Uncharacterized protein ENSP00000305492;
n=22; Eumetazoa|Rep: Uncharacterized protein
ENSP00000305492 - Homo sapiens (Human)
Length = 155
Score = 133 bits (322), Expect = 1e-29
Identities = 59/80 (73%), Positives = 65/80 (81%), Gaps = 3/80 (3%)
Frame = +1
Query: 118 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLIDATTAAFKAG 297
MPK+YCDYC+TYLTHDSP VRKTHC+GRKHK+NVK YYQKWM+EQAQ LID TTAAF+ G
Sbjct: 1 MPKFYCDYCNTYLTHDSPPVRKTHCSGRKHKENVKDYYQKWMKEQAQSLIDKTTAAFQQG 60
Query: 298 KIAQNPFGTK---GASIPPP 348
KI PF GA IPPP
Sbjct: 61 KIPPAPFSAPPPVGAMIPPP 80
>UniRef50_Q84VV2 Cluster: At4g03120; n=7; Viridiplantae|Rep:
At4g03120 - Arabidopsis thaliana (Mouse-ear cress)
Length = 207
Score = 88.2 bits (209), Expect = 5e-16
Identities = 36/51 (70%), Positives = 42/51 (82%)
Frame = +1
Query: 118 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLID 270
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ Y+Q++ E+Q Q LID
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYHQQFEEQQTQSLID 51
>UniRef50_Q54YA5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 174
Score = 83.4 bits (197), Expect = 1e-14
Identities = 41/81 (50%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Frame = +1
Query: 118 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLIDATTAAFKAG 297
MPKYYCDYCD YLTHDSPSVRK+H G++HK V+ +YQ++ E Q LI+A ++
Sbjct: 1 MPKYYCDYCDKYLTHDSPSVRKSHTVGKQHKLAVQLFYQQFEAEFTQSLIEARLKEYEES 60
Query: 298 K---IAQNPFGTKGASIPPPW 351
K I Q P G IP P+
Sbjct: 61 KGRLIHQPPMGI----IPTPY 77
>UniRef50_Q0UP28 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 206
Score = 76.6 bits (180), Expect = 2e-12
Identities = 31/57 (54%), Positives = 41/57 (71%)
Frame = +1
Query: 118 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLIDATTAAF 288
MPK++CDYCD YLTHDS SVRK H GR H NV+ YY++ +Q Q +I++ T A+
Sbjct: 1 MPKFFCDYCDVYLTHDSMSVRKAHNNGRNHLRNVQAYYEQISSDQTQQVINSITDAY 57
>UniRef50_Q5KC16 Cluster: U1 small nuclear ribonucleoprotein,
putative; n=1; Filobasidiella neoformans|Rep: U1 small
nuclear ribonucleoprotein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 220
Score = 68.5 bits (160), Expect = 4e-10
Identities = 31/60 (51%), Positives = 37/60 (61%)
Frame = +1
Query: 118 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLIDATTAAFKAG 297
M KYYCDYCD YLTHDS + RK H +GR H NV+ Y+ QAQ LID ++G
Sbjct: 1 MGKYYCDYCDIYLTHDSMNARKAHNSGRNHVANVRDYFAGLGGNQAQSLIDQIIQQHESG 60
>UniRef50_Q4P2Q5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 221
Score = 68.5 bits (160), Expect = 4e-10
Identities = 29/51 (56%), Positives = 35/51 (68%)
Frame = +1
Query: 118 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLID 270
M K+YCDYCD +LTHDS SVRK H +GR H NV+ YYQ E Q ++D
Sbjct: 1 MGKHYCDYCDVFLTHDSVSVRKAHNSGRNHLQNVREYYQTLEPECIQQVLD 51
>UniRef50_Q9P794 Cluster: U1 snRNP-associated protein Usp103; n=1;
Schizosaccharomyces pombe|Rep: U1 snRNP-associated
protein Usp103 - Schizosaccharomyces pombe (Fission
yeast)
Length = 182
Score = 68.1 bits (159), Expect = 6e-10
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = +1
Query: 118 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLID--ATTAAFK 291
MP+Y CDYC +LTHDS SVRK H GR H NV+ YY K +E+AQ ++ A++ K
Sbjct: 1 MPRYLCDYCQVWLTHDSQSVRKAHNAGRAHIQNVQDYYTKVAQEEAQKQLEERASSGFLK 60
Query: 292 AG 297
G
Sbjct: 61 KG 62
>UniRef50_Q5YEU6 Cluster: U1 small nuclear ribonucleoprotein; n=1;
Bigelowiella natans|Rep: U1 small nuclear
ribonucleoprotein - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 128
Score = 63.3 bits (147), Expect = 2e-08
Identities = 23/42 (54%), Positives = 33/42 (78%)
Frame = +1
Query: 118 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWM 243
M ++YCDYCD YLTHDS + RK H GR+H++NV+ YY +++
Sbjct: 1 MGRFYCDYCDIYLTHDSQAGRKQHMHGRRHQENVRQYYSEFL 42
>UniRef50_Q01EB2 Cluster: U1snrC U1 small nuclear ribonucleoprotein
C, probable; n=1; Ostreococcus tauri|Rep: U1snrC U1
small nuclear ribonucleoprotein C, probable -
Ostreococcus tauri
Length = 66
Score = 62.9 bits (146), Expect = 2e-08
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +1
Query: 118 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKW 240
M +YYCDYCD +LTHDS +VRK H +G KHK N + YY ++
Sbjct: 1 MARYYCDYCDAFLTHDSATVRKQHNSGFKHKANARAYYAQF 41
>UniRef50_Q22NU5 Cluster: U1 zinc finger family protein; n=1;
Tetrahymena thermophila SB210|Rep: U1 zinc finger family
protein - Tetrahymena thermophila SB210
Length = 626
Score = 62.1 bits (144), Expect = 4e-08
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = +1
Query: 115 KMPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEE 249
KMPK+YC+YC YLTH SPS R H GRKH +N YY++ +E+
Sbjct: 383 KMPKFYCEYCGIYLTHSSPSGRSQHAKGRKHINNRIEYYKQVIED 427
>UniRef50_A3LW12 Cluster: Predicted protein; n=2;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 144
Score = 61.3 bits (142), Expect = 6e-08
Identities = 25/44 (56%), Positives = 31/44 (70%)
Frame = +1
Query: 118 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEE 249
MPKYYCDYC++YLTHD+ SVRK+H GR H YY+ +E
Sbjct: 1 MPKYYCDYCNSYLTHDTMSVRKSHLIGRNHIKYYCTYYETKAKE 44
>UniRef50_Q8IAW3 Cluster: Putative uncharacterized protein
PF08_0084; n=3; Plasmodium|Rep: Putative uncharacterized
protein PF08_0084 - Plasmodium falciparum (isolate 3D7)
Length = 235
Score = 60.1 bits (139), Expect = 1e-07
Identities = 28/68 (41%), Positives = 35/68 (51%)
Frame = +1
Query: 118 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLIDATTAAFKAG 297
MPKYYC+YCD YLTH SP R+ H GRKH Y+Q + E+ + F
Sbjct: 1 MPKYYCEYCDIYLTHSSPVGRRQHIHGRKHISAKIEYFQNLLREEG--ITPQNFLGFLNN 58
Query: 298 KIAQNPFG 321
+ NP G
Sbjct: 59 RNINNPLG 66
>UniRef50_Q4UJ14 Cluster: RNA-binding protein (U1 snRNP-like),
putative; n=2; Theileria|Rep: RNA-binding protein (U1
snRNP-like), putative - Theileria annulata
Length = 151
Score = 60.1 bits (139), Expect = 1e-07
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = +1
Query: 118 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQ 252
MPK+YC+YC YLTH SP+ RK H GRKH Y+Q+ + EQ
Sbjct: 1 MPKFYCEYCSIYLTHSSPAGRKQHSQGRKHISAKVEYFQRLVREQ 45
>UniRef50_A5JZQ2 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 240
Score = 59.7 bits (138), Expect = 2e-07
Identities = 24/45 (53%), Positives = 29/45 (64%)
Frame = +1
Query: 118 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQ 252
MPKYYC+YCD YLTH SP R+ H GRKH Y+Q + E+
Sbjct: 1 MPKYYCEYCDIYLTHSSPVGRRQHIQGRKHISAKIEYFQNLLREE 45
>UniRef50_A7AMW3 Cluster: U1 zinc finger family protein; n=1;
Babesia bovis|Rep: U1 zinc finger family protein -
Babesia bovis
Length = 128
Score = 59.3 bits (137), Expect = 3e-07
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = +1
Query: 118 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEE 249
MPK+YC+YC YLTH SP+ RK H GRKH YYQ+ + E
Sbjct: 1 MPKFYCEYCGIYLTHSSPAGRKQHSMGRKHISMKVEYYQRLVRE 44
>UniRef50_A0CQS0 Cluster: Chromosome undetermined scaffold_24, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_24,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 132
Score = 59.3 bits (137), Expect = 3e-07
Identities = 27/58 (46%), Positives = 36/58 (62%)
Frame = +1
Query: 118 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLIDATTAAFK 291
MPK+YC+YC YLTH SPS RK H G+KH + YY+ M + L+D A+F+
Sbjct: 1 MPKFYCEYCGIYLTHSSPSGRKQHSLGKKHISAREDYYRAVMSD----LVDQLKASFQ 54
>UniRef50_A5DWZ7 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 185
Score = 58.0 bits (134), Expect = 6e-07
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = +1
Query: 118 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFY 228
MPKYYCDYC +YLTHD+ SVRK+H G+ H +K+Y
Sbjct: 1 MPKYYCDYCKSYLTHDTLSVRKSHLMGKNH---IKYY 34
>UniRef50_Q75ED9 Cluster: AAR142Cp; n=1; Eremothecium gossypii|Rep:
AAR142Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 212
Score = 57.6 bits (133), Expect = 8e-07
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = +1
Query: 118 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQ 258
M +YYCDYC YLTHDS SVRK+H G+ H YY ++QA+
Sbjct: 1 MARYYCDYCHAYLTHDSLSVRKSHLIGKNHIRLTADYYYNKAQQQAK 47
>UniRef50_Q5CQ56 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium parvum Iowa II|Rep: Putative
uncharacterized protein - Cryptosporidium parvum Iowa II
Length = 198
Score = 56.8 bits (131), Expect = 1e-06
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +1
Query: 118 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQ 234
MPK+YCDYCD YLTH S + RK H GRKH +N +Y+
Sbjct: 1 MPKFYCDYCDIYLTHSSTNGRKQHNLGRKHINNKIDHYK 39
>UniRef50_A7TPD7 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 171
Score = 54.4 bits (125), Expect = 7e-06
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +1
Query: 118 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQ 234
M +YYC+YC +YLTHD+ SVR++H G+ H V YY+
Sbjct: 1 MVRYYCEYCHSYLTHDTKSVRRSHLVGKNHLKAVADYYR 39
>UniRef50_Q1EA57 Cluster: Predicted protein; n=12;
Pezizomycotina|Rep: Predicted protein - Coccidioides
immitis
Length = 223
Score = 53.6 bits (123), Expect = 1e-05
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +1
Query: 172 SVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLIDATTAAFKA-GKIAQNPFGTKGASIPPP 348
SVRK H GR H NV YYQ+ E+AQ +ID+ T+++ A G+ A NP + +PPP
Sbjct: 2 SVRKAHNAGRNHLRNVVEYYQQIGHEKAQSVIDSITSSYAAEGQAAANPMLQQPGGLPPP 61
>UniRef50_Q05900 Cluster: U1 small nuclear ribonucleoprotein C
homolog; n=2; Saccharomyces cerevisiae|Rep: U1 small
nuclear ribonucleoprotein C homolog - Saccharomyces
cerevisiae (Baker's yeast)
Length = 231
Score = 52.8 bits (121), Expect = 2e-05
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +1
Query: 118 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQ 234
M +YYC+YC +YLTHD+ SVRK+H G+ H YY+
Sbjct: 1 MTRYYCEYCHSYLTHDTLSVRKSHLVGKNHLRITADYYR 39
>UniRef50_Q6FR68 Cluster: Candida glabrata strain CBS138 chromosome
I complete sequence; n=1; Candida glabrata|Rep: Candida
glabrata strain CBS138 chromosome I complete sequence -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 223
Score = 51.6 bits (118), Expect = 5e-05
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKH-KDNVKFYYQKWMEEQ 252
M +YYC+YC +YLTHD+ SVRK H G+ H + +Y + ++EQ
Sbjct: 1 MARYYCEYCHSYLTHDTLSVRKFHLMGKNHLRVRADYYRSQAIKEQ 46
>UniRef50_Q6CUF7 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome C of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=2; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome C of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 189
Score = 50.0 bits (114), Expect = 2e-04
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +1
Query: 118 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQ 234
M ++YC YC +YLTHD+ SVRK+H G+ H V YY+
Sbjct: 1 MVRFYCWYCKSYLTHDTASVRKSHLLGKNHIRLVADYYR 39
>UniRef50_UPI0000499CBA Cluster: hypothetical protein 13.t00050;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 13.t00050 - Entamoeba histolytica HM-1:IMSS
Length = 96
Score = 48.8 bits (111), Expect = 4e-04
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +1
Query: 124 KYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLID 270
+YYC+YC +L + RK H G+KHKD + Y++++ Q +ID
Sbjct: 5 RYYCEYCQKHLVYGGTRSRKEHILGKKHKDKMVEYFKQFEANILQRMID 53
>UniRef50_Q8SR72 Cluster: U1 SMALL NUCLEAR RIBONUCLEOPROTEIN; n=1;
Encephalitozoon cuniculi|Rep: U1 SMALL NUCLEAR
RIBONUCLEOPROTEIN - Encephalitozoon cuniculi
Length = 122
Score = 47.2 bits (107), Expect = 0.001
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +1
Query: 118 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQ--AQHLIDATTAAFK 291
MP+Y+C++C+ L +D R+ HC G KH K YY + E++ A +
Sbjct: 1 MPRYFCEFCNKMLLNDRLRSRRMHCGGAKHGLMRKAYYMEMFEKEDIAAEMASILRDIKT 60
Query: 292 AGKIAQNPFGTKGASIPP 345
AG+ + G+K S PP
Sbjct: 61 AGEKVECE-GSKSTSYPP 77
>UniRef50_A2D8V0 Cluster: U1 zinc finger family protein; n=1;
Trichomonas vaginalis G3|Rep: U1 zinc finger family
protein - Trichomonas vaginalis G3
Length = 218
Score = 46.0 bits (104), Expect = 0.003
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +1
Query: 130 YCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEE 249
YC YCD YL H+S R+ H G KH V YY +++ E
Sbjct: 7 YCPYCDVYLVHNSLRSRRDHLNGFKHLAAVSIYYHRFIPE 46
>UniRef50_A7RM68 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 164
Score = 41.5 bits (93), Expect = 0.055
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +1
Query: 124 KYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWME 246
+YYCD+CD DSP RK H G +H+ N K +Y + +
Sbjct: 4 RYYCDFCDRSFA-DSPQNRKKHNNGVQHQRNRKLHYDSFKD 43
>UniRef50_UPI0000E822A2 Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 166
Score = 39.9 bits (89), Expect = 0.17
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Frame = +3
Query: 435 DGSRRPHGATYDDGPSWSNASNDGNETT----YDGP--INGSYGPNGADGTDET 578
+G++ P+G DGP+ +N +N N T GP I+G+ GPNG DGT T
Sbjct: 103 NGTKGPNGPIGTDGPNGNNGTNRTNGTNGPNGIQGPNDISGTNGPNGTDGTQLT 156
Score = 38.3 bits (85), Expect = 0.52
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 423 TSANDGSRRPHGATYDDGPSWSNASNDGNETTYDGPINGSYGPNGADGTD 572
T+ +G +G +GP+ +N N+ N T NG+ GPNG GTD
Sbjct: 66 TNRPNGPNETNGTNRPNGPNGTNGPNETNGTKGPNGPNGTKGPNGPIGTD 115
Score = 37.9 bits (84), Expect = 0.68
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +3
Query: 417 HDTSANDGSRRPHGATYDDGPSWSNASNDGNETTYDGPINGSYGPNGADGTDET 578
++T+ +G R +G +GP+ +N +N N N GPNG +G +ET
Sbjct: 40 NETNGTNGINRTNGTNGTNGPNGTNGTNRPNGPNETNGTNRPNGPNGTNGPNET 93
Score = 37.5 bits (83), Expect = 0.90
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +3
Query: 423 TSANDGSRRPHGATYDDGPSWSNASNDGNETTYDGPINGSYGPNGADGTD 572
T +G+ P+G +GP+ +N +N N T NG+ GPNG +GT+
Sbjct: 21 TDGPNGTNAPNGTNGPNGPNETNGTNGINRTN---GTNGTNGPNGTNGTN 67
Score = 34.7 bits (76), Expect = 6.4
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 423 TSANDGSRRPHGATYDDGPSWSNASNDGNETTYDGPINGSYGPNGADGTDET 578
T +G+ P+G +G + N N+ N T NG+ G NG +GT+ T
Sbjct: 15 TGGPNGTDGPNGTNAPNGTNGPNGPNETNGTNGINRTNGTNGTNGPNGTNGT 66
>UniRef50_A7PRL0 Cluster: Chromosome chr14 scaffold_27, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_27, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 132
Score = 39.9 bits (89), Expect = 0.17
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 124 KYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWME 246
KY+CDYCD D+PS RK H G +H+ +Y + +
Sbjct: 5 KYHCDYCDKQF-QDTPSARKRHLQGLQHQRAKALWYDSFRD 44
>UniRef50_A7S772 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 323
Score = 39.5 bits (88), Expect = 0.22
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +1
Query: 121 PKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVK 222
PK +CD+C ++T + PSV + H G+KH++NV+
Sbjct: 27 PKKFCDFCKCWITDNKPSV-EFHERGKKHQENVQ 59
>UniRef50_O60138 Cluster: WW domain-binding protein 4; n=1;
Schizosaccharomyces pombe|Rep: WW domain-binding protein
4 - Schizosaccharomyces pombe (Fission yeast)
Length = 224
Score = 39.1 bits (87), Expect = 0.30
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 118 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVK 222
+PKYYC YC ++ D+P R++H KH+D +K
Sbjct: 8 IPKYYCKYCQIFV-KDTPFARRSHEQTYKHQDAIK 41
>UniRef50_O75554 Cluster: WW domain-binding protein 4; n=24;
Euteleostomi|Rep: WW domain-binding protein 4 - Homo
sapiens (Human)
Length = 376
Score = 39.1 bits (87), Expect = 0.30
Identities = 22/60 (36%), Positives = 31/60 (51%)
Frame = +1
Query: 121 PKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLIDATTAAFKAGK 300
PK +CDYC ++ + PSV + H G+ HK+NV K + E Q +D KA K
Sbjct: 9 PKKFCDYCKCWIADNRPSV-EFHERGKNHKENV----AKRISEIKQKSLDKAKEEEKASK 63
>UniRef50_A2EI42 Cluster: U1 zinc finger family protein; n=1;
Trichomonas vaginalis G3|Rep: U1 zinc finger family
protein - Trichomonas vaginalis G3
Length = 593
Score = 37.5 bits (83), Expect = 0.90
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 121 PKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNV 219
P+++CDYC + D+ +V KTHC +KHK V
Sbjct: 278 PEWFCDYCGRIV--DNANVFKTHCATKKHKKMV 308
>UniRef50_UPI00015B5423 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 164
Score = 37.1 bits (82), Expect = 1.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 124 KYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQ 252
+YYCDYCD D P+ RK H +H N + +Y+ + + +
Sbjct: 4 RYYCDYCDRSF-KDVPATRKKHLESLQHLKNKEEHYKYFKDPE 45
>UniRef50_UPI00003C02D8 Cluster: PREDICTED: hypothetical protein
isoform 1; n=1; Apis mellifera|Rep: PREDICTED:
hypothetical protein isoform 1 - Apis mellifera
Length = 220
Score = 36.7 bits (81), Expect = 1.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +1
Query: 52 PGCRXFGTRVVCCDLLGNCIVKMPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVK 222
PG T+ V +++GN K P CD CD L+ S +V TH G +H ++
Sbjct: 11 PGLNDPVTKAVVDNIMGNLPTKKPLVRCDDCD--LSFTSQTVLDTHLQGARHAKQIR 65
>UniRef50_Q17AZ1 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 363
Score = 36.7 bits (81), Expect = 1.6
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +1
Query: 130 YCDYCDTYLTHDSPSVRKTHCTGRKHKDNVK 222
YCD+C ++ + PS+ + H +GR+HK NV+
Sbjct: 12 YCDFCQCWIADNKPSI-QFHESGRRHKQNVQ 41
>UniRef50_Q16G73 Cluster: Putative uncharacterized protein; n=2;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 169
Score = 36.7 bits (81), Expect = 1.6
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 124 KYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQ 234
KYYCDYC T++ D P++ + H G H N +Y+
Sbjct: 4 KYYCDYCKTHIQRD-PNIVRKHNEGIPHLRNRADHYE 39
>UniRef50_UPI0000584055 Cluster: PREDICTED: similar to Zinc finger,
matrin type 5; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Zinc finger, matrin type 5 -
Strongylocentrotus purpuratus
Length = 184
Score = 36.3 bits (80), Expect = 2.1
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = +1
Query: 124 KYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLIDATTAAFKAGKI 303
+YYCDYCD +S + RK H G H K +Y + E + ++ A K+
Sbjct: 4 RYYCDYCDKTFADNSQN-RKKHLNGVVHDRLRKLHYSLFRE--PEDILSEEKAKIACLKL 60
Query: 304 AQNPFGT 324
Q+ F T
Sbjct: 61 KQSGFCT 67
>UniRef50_Q86F30 Cluster: Clone ZZD1160 mRNA sequence; n=1;
Schistosoma japonicum|Rep: Clone ZZD1160 mRNA sequence -
Schistosoma japonicum (Blood fluke)
Length = 153
Score = 36.3 bits (80), Expect = 2.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 124 KYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWME 246
++ CDYCD D+P R+ H G +H+ K +Y K+++
Sbjct: 4 RFICDYCDKSFP-DNPVNRRNHLKGIQHQQARKLHYDKFLD 43
>UniRef50_UPI00015B57F7 Cluster: PREDICTED: similar to conserved
hypothetical protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 422
Score = 35.9 bits (79), Expect = 2.8
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 130 YCDYCDTYLTHDSPSVRKTHCTGRKHKDNV 219
YCD+C ++ + PSV + H G+KHK+NV
Sbjct: 23 YCDFCKCWIADNKPSV-EFHEGGKKHKENV 51
>UniRef50_UPI00003C0427 Cluster: PREDICTED: similar to zinc finger,
matrin type 5; n=1; Apis mellifera|Rep: PREDICTED:
similar to zinc finger, matrin type 5 - Apis mellifera
Length = 167
Score = 35.9 bits (79), Expect = 2.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 124 KYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQ 252
+YYC+YCD D P RK H + +H N +Y + + +
Sbjct: 4 RYYCEYCDRSF-KDDPEARKKHLSSLQHAKNRADHYNMFKDPE 45
>UniRef50_UPI00006614D0 Cluster: Homolog of Gallus gallus "Nuclear
protein matrin 3.; n=2; Takifugu rubripes|Rep: Homolog
of Gallus gallus "Nuclear protein matrin 3. - Takifugu
rubripes
Length = 250
Score = 35.9 bits (79), Expect = 2.8
Identities = 12/43 (27%), Positives = 27/43 (62%)
Frame = +1
Query: 109 IVKMPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQK 237
+V ++C+ C + ++ + R+ HC+ ++H DN++ +YQK
Sbjct: 189 VVPTSGFFCNLCLVFYRNEK-TAREVHCSSQRHYDNLQKHYQK 230
>UniRef50_Q5KLZ9 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 242
Score = 35.9 bits (79), Expect = 2.8
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +3
Query: 420 DTSANDGS--RRPHGATYDDGPSWSNASNDGNETTYDGPINGSYGPNGADGTDETTPYEC 593
D+S +DGS T DDG + S ++DG TT DG + S G DGTD+ T
Sbjct: 73 DSSTDDGSDDTSDDDGTTDDGTADSGTTDDG--TTDDGS-DSSDGTTTDDGTDDGTEDST 129
Query: 594 TTNE*T 611
TT++ T
Sbjct: 130 TTDDGT 135
>UniRef50_Q55HM5 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 363
Score = 35.9 bits (79), Expect = 2.8
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +1
Query: 112 VKMPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDN 216
V +Y+C YC+ ++ D+PS R+ H TG KH N
Sbjct: 6 VSKKQYWCKYCNIWIRDDAPS-RRQHETGLKHIGN 39
>UniRef50_A0NER7 Cluster: ENSANGP00000031624; n=2; Culicidae|Rep:
ENSANGP00000031624 - Anopheles gambiae str. PEST
Length = 308
Score = 35.5 bits (78), Expect = 3.6
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +1
Query: 109 IVKMPKYYCDYCDTYL---THDSPSVRKTHCTGRKH-KDNVKFYYQKWMEEQAQ 258
+ K+ YCD C+ YL T + V + HC R H K ++F K + EQA+
Sbjct: 168 VKKVQVQYCDLCNMYLPRRTENQDRVLREHCKKRSHLKLYIRFRNDKKLREQAE 221
>UniRef50_Q501Z8 Cluster: Zgc:112384; n=3; Danio rerio|Rep:
Zgc:112384 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 412
Score = 34.7 bits (76), Expect = 6.4
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 121 PKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNV 219
P+ +C YC ++ + PSV + H G+ HK+NV
Sbjct: 9 PRKFCQYCKCWIADNKPSV-EFHERGKNHKENV 40
>UniRef50_A4LPM8 Cluster: DNA-binding HTH domain-containing protein;
n=9; Burkholderia|Rep: DNA-binding HTH domain-containing
protein - Burkholderia pseudomallei 305
Length = 185
Score = 34.7 bits (76), Expect = 6.4
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 420 DTSANDGSRRPHGATYDDGPSWSNASNDGNETTYDGPINGSYGPNGADGTD 572
D+ +G+ +GA +G + +N +N N T NG+ G NG +GT+
Sbjct: 40 DSDGANGANGANGANGANGANGANGANGANGTDGTNGTNGTNGTNGTNGTN 90
Score = 34.3 bits (75), Expect = 8.4
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 432 NDGSRRPHGATYDDGPSWSNASNDGNETTYDGPINGSYGPNGADGTDET 578
+DG+ +GA +G + +N +N N NG+ G NG +GT+ T
Sbjct: 41 SDGANGANGANGANGANGANGANGANGANGTDGTNGTNGTNGTNGTNGT 89
>UniRef50_A7RG76 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 721
Score = 34.7 bits (76), Expect = 6.4
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +1
Query: 130 YCDYCDTYLTHDSPSVRKTHCTGRKHKDNVK 222
YCD CD YL+ S ++ TH GRKH + VK
Sbjct: 21 YCDVCDVYLS--SAALVDTHKNGRKHTNLVK 49
>UniRef50_A2FSM2 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 506
Score = 34.7 bits (76), Expect = 6.4
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -1
Query: 333 CTFCAKWILCNFTSFKCCCCRVDKMLC 253
C FC K C F FKCCC + K C
Sbjct: 414 CKFCKKQCCCCFKCFKCCCKPICKGCC 440
>UniRef50_UPI000065E146 Cluster: WW domain-binding protein 4 (WBP-4)
(Formin-binding protein 21).; n=1; Takifugu
rubripes|Rep: WW domain-binding protein 4 (WBP-4)
(Formin-binding protein 21). - Takifugu rubripes
Length = 353
Score = 34.3 bits (75), Expect = 8.4
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 121 PKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNV 219
P+ +C+YC ++ + PS+ H G+ HK+NV
Sbjct: 8 PRKFCEYCKCWIADNKPSI-DFHERGKNHKENV 39
>UniRef50_Q3LW59 Cluster: Putative uncharacterized protein; n=1;
Bigelowiella natans|Rep: Putative uncharacterized
protein - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 100
Score = 34.3 bits (75), Expect = 8.4
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +1
Query: 109 IVKMPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNV 219
I K+ K+ C C YL DS S K H TG+KHK N+
Sbjct: 45 IFKLSKFDCTICKCYLW-DSDSFLK-HLTGKKHKRNI 79
>UniRef50_Q1E756 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 302
Score = 34.3 bits (75), Expect = 8.4
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +1
Query: 121 PKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLIDATTA 282
PKY+C +C TY+ D+P R H KH+ ++K + + Q + D+ A
Sbjct: 9 PKYWCKHCKTYV-RDTPFERTQHEATGKHQGSLKRFLRDVHRSQDKDQKDSQKA 61
>UniRef50_Q5UX77 Cluster: Putative uncharacterized protein; n=1;
Haloarcula marismortui|Rep: Putative uncharacterized
protein - Haloarcula marismortui (Halobacterium
marismortui)
Length = 410
Score = 34.3 bits (75), Expect = 8.4
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 429 ANDGSRRPHGATYDDGPSWSNASNDGNETTYD-GPINGSYGPNGADGTDETT 581
A+ G T D S + S DG++ + D G +GS G +G+DG D+T+
Sbjct: 300 ADSGGEDDSAGTSDSDDSSDSGSADGSDGSSDSGSADGSDGNSGSDGADDTS 351
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,131,800,839
Number of Sequences: 1657284
Number of extensions: 20939035
Number of successful extensions: 52373
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 48000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52108
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 159698672100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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