Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_C04_e507_06.seq
         (1503 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     27   0.27 
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    25   1.9  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    25   1.9  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   7.8  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 27.5 bits (58), Expect = 0.27
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = +1

Query: 70  GTRVVCCDLLGN--CIVK--MPKYYCDYCDTYLTHDSPSVRKTH 189
           G   V CD +G    I+K  +PK Y DYC    T +S SVR +H
Sbjct: 643 GNSTVDCDDVGTFGAILKKLLPKVYEDYCP---TSNSGSVRMSH 683


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = +3

Query: 423 TSANDGSRRPHGAT-YDDGPSWSNASNDGNETTYDGPINGSYGPNGADGTDETTP 584
           T+ + G+R    +T + DG S  +     +  +Y GP+N      G  G     P
Sbjct: 48  TNGDGGARSNADSTSHTDGASTPDVRPPSSSLSYGGPVNDDVRSPGTPGPLSQAP 102


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = +3

Query: 423 TSANDGSRRPHGAT-YDDGPSWSNASNDGNETTYDGPINGSYGPNGADGTDETTP 584
           T+ + G+R    +T + DG S  +     +  +Y GP+N      G  G     P
Sbjct: 204 TNGDGGARSNADSTSHTDGASTPDVRPPSSSLSYGGPVNDDVRSPGTPGPLSQAP 258


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
            candidate 23 protein.
          Length = 291

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = +3

Query: 1059 WVWVXT*CSLNLKLXLGFSXXETPSKLKXLVEFFSNHFNG 1178
            + W+   C LNL +   F    T    + +V F   HF G
Sbjct: 55   YYWLNV-CCLNLSIVTIFFNFATKKLEQFIVRFMKYHFFG 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 285,531
Number of Sequences: 336
Number of extensions: 6112
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 45067000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)