Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_C01_e483_05.seq
(1486 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein. 151 8e-36
X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein... 151 8e-36
M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive elemen... 151 8e-36
M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein. 151 8e-36
M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-bindi... 151 8e-36
M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-bindi... 151 8e-36
L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A pro... 151 8e-36
L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens db... 151 8e-36
J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein. 151 8e-36
BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1... 151 8e-36
BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1... 151 8e-36
BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1... 151 8e-36
BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein. 151 8e-36
BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1... 151 8e-36
BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1... 151 8e-36
BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1... 151 8e-36
BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1... 151 8e-36
BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain prote... 151 8e-36
BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for IM... 151 8e-36
BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein. 151 8e-36
BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain prote... 151 8e-36
BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1... 151 8e-36
BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1... 151 8e-36
BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain prote... 151 8e-36
BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1... 151 8e-36
BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein. 151 8e-36
AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant pr... 151 8e-36
BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein. 149 2e-35
BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2... 149 3e-35
BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2... 149 3e-35
AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-bo... 149 3e-35
DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein. 143 2e-33
AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-bo... 89 4e-17
Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C. eleg... 65 7e-10
DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein. 65 7e-10
BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for IM... 65 7e-10
BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for IM... 65 7e-10
BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein. 65 7e-10
BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein. 65 7e-10
BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein. 65 7e-10
AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C. el... 65 7e-10
AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens ... 65 7e-10
BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein. 63 3e-09
AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C. ele... 63 3e-09
AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens ... 63 3e-09
AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN... 63 3e-09
>X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein.
Length = 372
Score = 151 bits (365), Expect = 8e-36
Identities = 71/91 (78%), Positives = 78/91 (85%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADKRR 534
V GEKG EAA VTGP G V+GS YAAD+RR
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR 176
>X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein A
protein.
Length = 372
Score = 151 bits (365), Expect = 8e-36
Identities = 71/91 (78%), Positives = 78/91 (85%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADKRR 534
V GEKG EAA VTGP G V+GS YAAD+RR
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR 176
>M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive element
binding protein-1 protein.
Length = 322
Score = 151 bits (365), Expect = 8e-36
Identities = 71/89 (79%), Positives = 77/89 (86%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 53 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 112
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADK 528
V GEKG EAA VTGPGG V+GS YAAD+
Sbjct: 113 VEGEKGAEAANVTGPGGVPVQGSKYAADR 141
>M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein.
Length = 320
Score = 151 bits (365), Expect = 8e-36
Identities = 71/89 (79%), Positives = 77/89 (86%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 51 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 110
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADK 528
V GEKG EAA VTGPGG V+GS YAAD+
Sbjct: 111 VEGEKGAEAANVTGPGGVPVQGSKYAADR 139
>M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-binding
protein B (dbpB) gene, 3' end. ).
Length = 364
Score = 151 bits (365), Expect = 8e-36
Identities = 71/89 (79%), Positives = 77/89 (86%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 94 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 153
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADK 528
V GEKG EAA VTGPGG V+GS YAAD+
Sbjct: 154 VEGEKGAEAANVTGPGGVPVQGSKYAADR 182
>M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-binding
protein A (dbpA) gene, 3' end. ).
Length = 412
Score = 151 bits (365), Expect = 8e-36
Identities = 71/91 (78%), Positives = 78/91 (85%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 156 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 215
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADKRR 534
V GEKG EAA VTGP G V+GS YAAD+RR
Sbjct: 216 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR 246
>L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A
protein.
Length = 342
Score = 151 bits (365), Expect = 8e-36
Identities = 71/91 (78%), Positives = 78/91 (85%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADKRR 534
V GEKG EAA VTGP G V+GS YAAD+RR
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR 176
>L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens
dbpB-like protein mRNA, complete cds. ).
Length = 324
Score = 151 bits (365), Expect = 8e-36
Identities = 71/89 (79%), Positives = 77/89 (86%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADK 528
V GEKG EAA VTGPGG V+GS YAAD+
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAADR 142
>J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein.
Length = 317
Score = 151 bits (365), Expect = 8e-36
Identities = 71/89 (79%), Positives = 77/89 (86%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADK 528
V GEKG EAA VTGPGG V+GS YAAD+
Sbjct: 114 VEGEKGEEAANVTGPGGVPVQGSKYAADR 142
>BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 151 bits (365), Expect = 8e-36
Identities = 71/89 (79%), Positives = 77/89 (86%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADK 528
V GEKG EAA VTGPGG V+GS YAAD+
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAADR 142
>BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 151 bits (365), Expect = 8e-36
Identities = 71/89 (79%), Positives = 77/89 (86%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADK 528
V GEKG EAA VTGPGG V+GS YAAD+
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAADR 142
>BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 151 bits (365), Expect = 8e-36
Identities = 71/89 (79%), Positives = 77/89 (86%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADK 528
V GEKG EAA VTGPGG V+GS YAAD+
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAADR 142
>BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 151 bits (365), Expect = 8e-36
Identities = 71/89 (79%), Positives = 77/89 (86%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADK 528
V GEKG EAA VTGPGG V+GS YAAD+
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAADR 142
>BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 151 bits (365), Expect = 8e-36
Identities = 71/89 (79%), Positives = 77/89 (86%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADK 528
V GEKG EAA VTGPGG V+GS YAAD+
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAADR 142
>BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 151 bits (365), Expect = 8e-36
Identities = 71/89 (79%), Positives = 77/89 (86%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADK 528
V GEKG EAA VTGPGG V+GS YAAD+
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAADR 142
>BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 151 bits (365), Expect = 8e-36
Identities = 71/89 (79%), Positives = 77/89 (86%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADK 528
V GEKG EAA VTGPGG V+GS YAAD+
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAADR 142
>BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 151 bits (365), Expect = 8e-36
Identities = 71/89 (79%), Positives = 77/89 (86%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADK 528
V GEKG EAA VTGPGG V+GS YAAD+
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAADR 142
>BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 151 bits (365), Expect = 8e-36
Identities = 71/91 (78%), Positives = 78/91 (85%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADKRR 534
V GEKG EAA VTGP G V+GS YAAD+RR
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR 176
>BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for
IMAGE:3882730) protein.
Length = 267
Score = 151 bits (365), Expect = 8e-36
Identities = 71/89 (79%), Positives = 77/89 (86%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADK 528
V GEKG EAA VTGPGG V+GS YAAD+
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAADR 142
>BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 151 bits (365), Expect = 8e-36
Identities = 71/91 (78%), Positives = 78/91 (85%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADKRR 534
V GEKG EAA VTGP G V+GS YAAD+RR
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR 176
>BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 151 bits (365), Expect = 8e-36
Identities = 71/91 (78%), Positives = 78/91 (85%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADKRR 534
V GEKG EAA VTGP G V+GS YAAD+RR
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR 176
>BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 151 bits (365), Expect = 8e-36
Identities = 71/89 (79%), Positives = 77/89 (86%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADK 528
V GEKG EAA VTGPGG V+GS YAAD+
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAADR 142
>BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 151 bits (365), Expect = 8e-36
Identities = 71/89 (79%), Positives = 77/89 (86%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADK 528
V GEKG EAA VTGPGG V+GS YAAD+
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAADR 142
>BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 151 bits (365), Expect = 8e-36
Identities = 71/91 (78%), Positives = 78/91 (85%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADKRR 534
V GEKG EAA VTGP G V+GS YAAD+RR
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR 176
>BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 151 bits (365), Expect = 8e-36
Identities = 71/89 (79%), Positives = 77/89 (86%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADK 528
V GEKG EAA VTGPGG V+GS YAAD+
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAADR 142
>BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 151 bits (365), Expect = 8e-36
Identities = 71/89 (79%), Positives = 77/89 (86%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADK 528
V GEKG EAA VTGPGG V+GS YAAD+
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAADR 142
>AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant
protein.
Length = 134
Score = 151 bits (365), Expect = 8e-36
Identities = 71/91 (78%), Positives = 78/91 (85%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 19 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 78
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADKRR 534
V GEKG EAA VTGP G V+GS YAAD+RR
Sbjct: 79 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR 109
>BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 149 bits (362), Expect = 2e-35
Identities = 70/91 (76%), Positives = 78/91 (85%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RS+GDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSLGDGETVEFDV 145
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADKRR 534
V GEKG EAA VTGP G V+GS YAAD+RR
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR 176
>BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 149 bits (360), Expect = 3e-35
Identities = 70/92 (76%), Positives = 78/92 (84%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSVGDGE VEF V
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADKRRS 537
V GEKG EA VTGPGG VKGS YA ++R+S
Sbjct: 149 VEGEKGAEATNVTGPGGVPVKGSRYAPNRRKS 180
>BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 149 bits (360), Expect = 3e-35
Identities = 70/92 (76%), Positives = 78/92 (84%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSVGDGE VEF V
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADKRRS 537
V GEKG EA VTGPGG VKGS YA ++R+S
Sbjct: 149 VEGEKGAEATNVTGPGGVPVKGSRYAPNRRKS 180
>AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-box
binding protein protein.
Length = 364
Score = 149 bits (360), Expect = 3e-35
Identities = 70/92 (76%), Positives = 78/92 (84%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSVGDGE VEF V
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADKRRS 537
V GEKG EA VTGPGG VKGS YA ++R+S
Sbjct: 149 VEGEKGAEATNVTGPGGVPVKGSRYAPNRRKS 180
>DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein.
Length = 319
Score = 143 bits (346), Expect = 2e-33
Identities = 67/89 (75%), Positives = 75/89 (84%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
VIA KV GTVKWFNV++GYGFI+RNDTKEDVFVH TA +NNPRK +RSVGDGE VEF V
Sbjct: 50 VIATKVLGTVKWFNVRNGYGFIHRNDTKEDVFVHHTAXKKNNPRKYLRSVGDGEXVEFDV 109
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADK 528
V GEKG +AA VTGPGG V+GS YAAD+
Sbjct: 110 VEGEKGAKAANVTGPGGVPVQGSKYAADR 138
>AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-box
binding protein variant protein.
Length = 268
Score = 89.0 bits (211), Expect = 4e-17
Identities = 43/62 (69%), Positives = 49/62 (79%)
Frame = +1
Query: 352 VFVHQTAIIRNNPRKAVRSVGDGEAVEFAVVAGEKGYEAARVTGPGGESVKGSPYAADKR 531
+F +QTAI RNNPRK +RSVGDGE VEF VV GEKG EA VTGPGG VKGS YA ++R
Sbjct: 23 LFPNQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRR 82
Query: 532 RS 537
+S
Sbjct: 83 KS 84
>Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 64.9 bits (151), Expect = 7e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +1
Query: 280 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFA 438
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 439 VVAGEKGYEAARVTGPGGESVKGS 510
KG E+ RVTGPGG GS
Sbjct: 87 FKKSSKGLESIRVTGPGGSPCLGS 110
>DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein.
Length = 250
Score = 64.9 bits (151), Expect = 7e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +1
Query: 280 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFA 438
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 439 VVAGEKGYEAARVTGPGGESVKGS 510
KG E+ RVTGPGG GS
Sbjct: 87 FKKSSKGLESIRVTGPGGSPCLGS 110
>BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127315) protein.
Length = 227
Score = 64.9 bits (151), Expect = 7e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +1
Query: 280 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFA 438
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 439 VVAGEKGYEAARVTGPGGESVKGS 510
KG E+ RVTGPGG GS
Sbjct: 64 FKKSSKGLESIRVTGPGGSPCLGS 87
>BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127314) protein.
Length = 227
Score = 64.9 bits (151), Expect = 7e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +1
Query: 280 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFA 438
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 439 VVAGEKGYEAARVTGPGGESVKGS 510
KG E+ RVTGPGG GS
Sbjct: 64 FKKSSKGLESIRVTGPGGSPCLGS 87
>BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 64.9 bits (151), Expect = 7e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +1
Query: 280 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFA 438
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 439 VVAGEKGYEAARVTGPGGESVKGS 510
KG E+ RVTGPGG GS
Sbjct: 64 FKKSSKGLESIRVTGPGGSPCLGS 87
>BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 64.9 bits (151), Expect = 7e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +1
Query: 280 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFA 438
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 439 VVAGEKGYEAARVTGPGGESVKGS 510
KG E+ RVTGPGG GS
Sbjct: 64 FKKSSKGLESIRVTGPGGSPCLGS 87
>BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 64.9 bits (151), Expect = 7e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +1
Query: 280 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFA 438
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 439 VVAGEKGYEAARVTGPGGESVKGS 510
KG E+ RVTGPGG GS
Sbjct: 64 FKKSSKGLESIRVTGPGGSPCLGS 87
>AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 64.9 bits (151), Expect = 7e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +1
Query: 280 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFA 438
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 439 VVAGEKGYEAARVTGPGGESVKGS 510
KG E+ RVTGPGG GS
Sbjct: 87 FKKSSKGLESIRVTGPGGSPCLGS 110
>AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ16517 fis, clone NT2RI3007167. ).
Length = 250
Score = 64.9 bits (151), Expect = 7e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +1
Query: 280 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFA 438
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 439 VVAGEKGYEAARVTGPGGESVKGS 510
KG E+ RVTGPGG GS
Sbjct: 87 FKKSSKGLESIRVTGPGGSPCLGS 110
>BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein.
Length = 209
Score = 62.9 bits (146), Expect = 3e-09
Identities = 36/84 (42%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +1
Query: 280 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFA 438
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKL----HMEGFRSLKEGEAVEFT 96
Query: 439 VVAGEKGYEAARVTGPGGESVKGS 510
KG E+ RVTGPGG GS
Sbjct: 97 FKKSAKGLESIRVTGPGGVFCIGS 120
>AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C.
elegans) protein.
Length = 209
Score = 62.9 bits (146), Expect = 3e-09
Identities = 36/84 (42%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +1
Query: 280 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFA 438
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKL----HMEGFRSLKEGEAVEFT 96
Query: 439 VVAGEKGYEAARVTGPGGESVKGS 510
KG E+ RVTGPGG GS
Sbjct: 97 FKKSAKGLESIRVTGPGGVFCIGS 120
>AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ12457 fis, clone NT2RM1000666, weakly similar to
DNA-BINDING PROTEIN A. ).
Length = 209
Score = 62.9 bits (146), Expect = 3e-09
Identities = 36/84 (42%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +1
Query: 280 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFA 438
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKL----HMEGFRSLKEGEAVEFT 96
Query: 439 VVAGEKGYEAARVTGPGGESVKGS 510
KG E+ RVTGPGG GS
Sbjct: 97 FKKSAKGLESIRVTGPGGVFCIGS 120
>AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN-28
protein.
Length = 209
Score = 62.9 bits (146), Expect = 3e-09
Identities = 36/84 (42%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +1
Query: 280 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFA 438
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKL----HMEGFRSLKEGEAVEFT 96
Query: 439 VVAGEKGYEAARVTGPGGESVKGS 510
KG E+ RVTGPGG GS
Sbjct: 97 FKKSAKGLESIRVTGPGGVFCIGS 120
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,943,454
Number of Sequences: 237096
Number of extensions: 2152758
Number of successful extensions: 9544
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 9107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9524
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 21978462734
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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