Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_C01_e483_05.seq
(1486 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061440-1|AAL28988.1| 352|Drosophila melanogaster LD37574p pro... 162 1e-39
AE014296-2093|AAF49961.3| 352|Drosophila melanogaster CG5654-PA... 162 1e-39
U49120-1|AAB94634.1| 359|Drosophila melanogaster Y-box protein ... 155 1e-37
AY118360-1|AAM48389.1| 195|Drosophila melanogaster RE05342p pro... 66 2e-10
AF521096-1|AAM77748.1| 195|Drosophila melanogaster RNA-binding ... 66 2e-10
AE014296-983|AAF50758.2| 195|Drosophila melanogaster CG17334-PA... 66 2e-10
AY060441-1|AAL25480.1| 143|Drosophila melanogaster LD47312p pro... 32 1.8
AE014296-2798|AAN11740.1| 143|Drosophila melanogaster CG9705-PB... 32 1.8
AE014296-2797|AAF49414.1| 143|Drosophila melanogaster CG9705-PA... 32 1.8
AE013599-3457|AAF46894.2| 1227|Drosophila melanogaster CG30268-P... 30 7.1
AY113377-1|AAM29382.1| 431|Drosophila melanogaster RE01730p pro... 30 9.4
AY069217-1|AAL39362.1| 849|Drosophila melanogaster GH26442p pro... 30 9.4
AE014297-136|AAO41501.1| 849|Drosophila melanogaster CG31534-PB... 30 9.4
AE014297-135|AAF52102.3| 889|Drosophila melanogaster CG31534-PA... 30 9.4
AE013599-3358|AAM68213.1| 431|Drosophila melanogaster CG3074-PB... 30 9.4
AE013599-3357|AAF46818.2| 431|Drosophila melanogaster CG3074-PA... 30 9.4
>AY061440-1|AAL28988.1| 352|Drosophila melanogaster LD37574p
protein.
Length = 352
Score = 162 bits (393), Expect = 1e-39
Identities = 75/93 (80%), Positives = 83/93 (89%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
VIA KV+GTVKWFNVKSGYGFINRNDT+EDVFVHQ+AI RNNP+KAVRSVGDGE VEF V
Sbjct: 57 VIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGEVVEFDV 116
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADKRRSY 540
V GEKG EAA VTGP GE V+GS +AADKRR++
Sbjct: 117 VIGEKGNEAANVTGPSGEPVRGSQFAADKRRNF 149
>AE014296-2093|AAF49961.3| 352|Drosophila melanogaster CG5654-PA
protein.
Length = 352
Score = 162 bits (393), Expect = 1e-39
Identities = 75/93 (80%), Positives = 83/93 (89%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
VIA KV+GTVKWFNVKSGYGFINRNDT+EDVFVHQ+AI RNNP+KAVRSVGDGE VEF V
Sbjct: 57 VIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGEVVEFDV 116
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADKRRSY 540
V GEKG EAA VTGP GE V+GS +AADKRR++
Sbjct: 117 VIGEKGNEAANVTGPSGEPVRGSQFAADKRRNF 149
>U49120-1|AAB94634.1| 359|Drosophila melanogaster Y-box protein
protein.
Length = 359
Score = 155 bits (377), Expect = 1e-37
Identities = 74/93 (79%), Positives = 82/93 (88%)
Frame = +1
Query: 262 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 441
VIA KV+GTVKWFNVKSGYGFINRNDT+EDVFVHQ+AI NNP+KAVRSVGDGE VEF V
Sbjct: 58 VIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIA-NNPKKAVRSVGDGEVVEFDV 116
Query: 442 VAGEKGYEAARVTGPGGESVKGSPYAADKRRSY 540
V GEKG EAA VTGP GE V+GS +AADKRR++
Sbjct: 117 VIGEKGNEAANVTGPSGEPVRGSQFAADKRRNF 149
>AY118360-1|AAM48389.1| 195|Drosophila melanogaster RE05342p
protein.
Length = 195
Score = 65.7 bits (153), Expect = 2e-10
Identities = 34/78 (43%), Positives = 44/78 (56%)
Frame = +1
Query: 283 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAVVAGEKGY 462
G KWFNV G+GF+ ND ++VFVHQ+ I RS+G+ E VEF +G
Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVI----QMSGFRSLGEQEEVEFECQRTSRGL 96
Query: 463 EAARVTGPGGESVKGSPY 516
EA RV+ G S +GS Y
Sbjct: 97 EATRVSSRHGGSCQGSTY 114
>AF521096-1|AAM77748.1| 195|Drosophila melanogaster RNA-binding
protein LIN-28 protein.
Length = 195
Score = 65.7 bits (153), Expect = 2e-10
Identities = 34/78 (43%), Positives = 44/78 (56%)
Frame = +1
Query: 283 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAVVAGEKGY 462
G KWFNV G+GF+ ND ++VFVHQ+ I RS+G+ E VEF +G
Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVI----QMSGFRSLGEQEEVEFECQRTSRGL 96
Query: 463 EAARVTGPGGESVKGSPY 516
EA RV+ G S +GS Y
Sbjct: 97 EATRVSSRHGGSCQGSTY 114
>AE014296-983|AAF50758.2| 195|Drosophila melanogaster CG17334-PA
protein.
Length = 195
Score = 65.7 bits (153), Expect = 2e-10
Identities = 34/78 (43%), Positives = 44/78 (56%)
Frame = +1
Query: 283 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAVVAGEKGY 462
G KWFNV G+GF+ ND ++VFVHQ+ I RS+G+ E VEF +G
Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVI----QMSGFRSLGEQEEVEFECQRTSRGL 96
Query: 463 EAARVTGPGGESVKGSPY 516
EA RV+ G S +GS Y
Sbjct: 97 EATRVSSRHGGSCQGSTY 114
>AY060441-1|AAL25480.1| 143|Drosophila melanogaster LD47312p
protein.
Length = 143
Score = 32.3 bits (70), Expect = 1.8
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +1
Query: 277 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 375
V+G VK F+ G+GFI N EDVF H + I
Sbjct: 55 VTGMVKSFSRTKGHGFITPNAGGEDVFCHVSDI 87
>AE014296-2798|AAN11740.1| 143|Drosophila melanogaster CG9705-PB,
isoform B protein.
Length = 143
Score = 32.3 bits (70), Expect = 1.8
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +1
Query: 277 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 375
V+G VK F+ G+GFI N EDVF H + I
Sbjct: 55 VTGMVKSFSRTKGHGFITPNAGGEDVFCHVSDI 87
>AE014296-2797|AAF49414.1| 143|Drosophila melanogaster CG9705-PA,
isoform A protein.
Length = 143
Score = 32.3 bits (70), Expect = 1.8
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +1
Query: 277 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 375
V+G VK F+ G+GFI N EDVF H + I
Sbjct: 55 VTGMVKSFSRTKGHGFITPNAGGEDVFCHVSDI 87
>AE013599-3457|AAF46894.2| 1227|Drosophila melanogaster CG30268-PA
protein.
Length = 1227
Score = 30.3 bits (65), Expect = 7.1
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -2
Query: 378 DYRSLMYKHIFFGV-IPIDETISTLDVEPFDSTRNLFS 268
+YR L Y H F G+ +P D + + +EP +NLF+
Sbjct: 599 NYRELYYIHFFSGISLPNDLMYNMMPIEPRRMKKNLFN 636
>AY113377-1|AAM29382.1| 431|Drosophila melanogaster RE01730p
protein.
Length = 431
Score = 29.9 bits (64), Expect = 9.4
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 528 TPQLPSSILPTSRWGTWW*RSPTQRWCRAPW 620
T LPSS +W ++ P Q WC A W
Sbjct: 184 TDGLPSSFNALDKWSSYISEVPDQGWCGASW 214
>AY069217-1|AAL39362.1| 849|Drosophila melanogaster GH26442p
protein.
Length = 849
Score = 29.9 bits (64), Expect = 9.4
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 860 RQPLQHQTNNSSQSRXK-QASXPPIDPXPMXAXLG 961
RQ +H TN+S ++ + +A+ PP+ P P A +G
Sbjct: 354 RQSSEHYTNSSEENDTQSEATPPPLPPPPSTAQVG 388
>AE014297-136|AAO41501.1| 849|Drosophila melanogaster CG31534-PB,
isoform B protein.
Length = 849
Score = 29.9 bits (64), Expect = 9.4
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 860 RQPLQHQTNNSSQSRXK-QASXPPIDPXPMXAXLG 961
RQ +H TN+S ++ + +A+ PP+ P P A +G
Sbjct: 354 RQSSEHYTNSSEENDTQSEATPPPLPPPPSTAQVG 388
>AE014297-135|AAF52102.3| 889|Drosophila melanogaster CG31534-PA,
isoform A protein.
Length = 889
Score = 29.9 bits (64), Expect = 9.4
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 860 RQPLQHQTNNSSQSRXK-QASXPPIDPXPMXAXLG 961
RQ +H TN+S ++ + +A+ PP+ P P A +G
Sbjct: 354 RQSSEHYTNSSEENDTQSEATPPPLPPPPSTAQVG 388
>AE013599-3358|AAM68213.1| 431|Drosophila melanogaster CG3074-PB,
isoform B protein.
Length = 431
Score = 29.9 bits (64), Expect = 9.4
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 528 TPQLPSSILPTSRWGTWW*RSPTQRWCRAPW 620
T LPSS +W ++ P Q WC A W
Sbjct: 184 TDGLPSSFNALDKWSSYISEVPDQGWCGASW 214
>AE013599-3357|AAF46818.2| 431|Drosophila melanogaster CG3074-PA,
isoform A protein.
Length = 431
Score = 29.9 bits (64), Expect = 9.4
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 528 TPQLPSSILPTSRWGTWW*RSPTQRWCRAPW 620
T LPSS +W ++ P Q WC A W
Sbjct: 184 TDGLPSSFNALDKWSSYISEVPDQGWCGASW 214
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,153,245
Number of Sequences: 53049
Number of extensions: 622198
Number of successful extensions: 2169
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2164
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8249942736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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