Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_B12_e570_04.seq
         (1556 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0584 - 30135768-30135790,30136104-30136866                       31   2.5  

>02_05_0584 - 30135768-30135790,30136104-30136866
          Length = 261

 Score = 31.1 bits (67), Expect = 2.5
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +3

Query: 1164 WPXXGXPXGAGPXGXPPXXGSGKXPXP 1244
            +P  G P GAG  G PP  GSG  P P
Sbjct: 72   FPIPGSPAGAG--GAPPSAGSGGFPFP 96


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,521,133
Number of Sequences: 37544
Number of extensions: 483161
Number of successful extensions: 536
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 5023712764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)