Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_B11_e562_03.seq
(1547 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0428 + 3055163-3055573 266 2e-71
06_01_0427 - 3054204-3054614 266 2e-71
06_01_0423 - 3039527-3039937 266 2e-71
05_04_0449 - 21355439-21355849 266 2e-71
04_03_0909 + 20748653-20749063 266 2e-71
01_06_1456 + 37507156-37507566 266 2e-71
06_01_0217 - 1644696-1645034,1645143-1645214 265 6e-71
11_01_0348 - 2607315-2607424,2608634-2609030 261 1e-69
03_03_0212 + 15479850-15479921,15479965-15480083,15480175-154802... 250 2e-66
06_01_0425 - 3045557-3046004,3046852-3046856 227 1e-59
12_02_0048 - 12852335-12852745 221 2e-57
02_03_0107 - 15303890-15304060,15304158-15304248,15304505-153046... 213 2e-55
12_02_0047 - 12836779-12837189 209 5e-54
02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596 199 4e-51
04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392 143 4e-34
05_05_0297 - 23921648-23921758,23922011-23922089,23922774-239228... 136 4e-32
04_02_0033 - 8997041-8997754 32 1.4
02_01_0611 - 4567839-4568144,4568280-4569209,4569301-4569566,456... 30 4.3
10_02_0068 + 4888273-4889266,4889375-4889397 30 5.7
02_05_1052 + 33770355-33773981,33774217-33774336,33774880-337749... 29 7.5
05_04_0149 - 18441561-18442082,18442723-18442861,18443295-184433... 29 9.9
03_01_0575 + 4247431-4247489,4248475-4248547,4248792-4249229,425... 29 9.9
>06_01_0428 + 3055163-3055573
Length = 136
Score = 266 bits (653), Expect = 2e-71
Identities = 129/136 (94%), Positives = 135/136 (99%)
Frame = +1
Query: 193 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 372
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 373 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 552
LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 553 MPKDIQLARRIRGERA 600
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>06_01_0427 - 3054204-3054614
Length = 136
Score = 266 bits (653), Expect = 2e-71
Identities = 129/136 (94%), Positives = 135/136 (99%)
Frame = +1
Query: 193 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 372
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 373 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 552
LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 553 MPKDIQLARRIRGERA 600
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>06_01_0423 - 3039527-3039937
Length = 136
Score = 266 bits (653), Expect = 2e-71
Identities = 129/136 (94%), Positives = 135/136 (99%)
Frame = +1
Query: 193 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 372
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 373 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 552
LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 553 MPKDIQLARRIRGERA 600
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>05_04_0449 - 21355439-21355849
Length = 136
Score = 266 bits (653), Expect = 2e-71
Identities = 129/136 (94%), Positives = 135/136 (99%)
Frame = +1
Query: 193 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 372
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 373 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 552
LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 553 MPKDIQLARRIRGERA 600
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>04_03_0909 + 20748653-20749063
Length = 136
Score = 266 bits (653), Expect = 2e-71
Identities = 129/136 (94%), Positives = 135/136 (99%)
Frame = +1
Query: 193 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 372
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 373 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 552
LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 553 MPKDIQLARRIRGERA 600
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>01_06_1456 + 37507156-37507566
Length = 136
Score = 266 bits (653), Expect = 2e-71
Identities = 129/136 (94%), Positives = 135/136 (99%)
Frame = +1
Query: 193 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 372
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 373 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 552
LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 553 MPKDIQLARRIRGERA 600
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>06_01_0217 - 1644696-1645034,1645143-1645214
Length = 136
Score = 265 bits (650), Expect = 6e-71
Identities = 130/136 (95%), Positives = 134/136 (98%)
Frame = +1
Query: 193 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 372
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 373 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 552
LLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 553 MPKDIQLARRIRGERA 600
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>11_01_0348 - 2607315-2607424,2608634-2609030
Length = 168
Score = 261 bits (639), Expect = 1e-69
Identities = 126/133 (94%), Positives = 132/133 (99%)
Frame = +1
Query: 193 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 372
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 373 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 552
LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 553 MPKDIQLARRIRG 591
MPKDIQLARRIRG
Sbjct: 121 MPKDIQLARRIRG 133
>03_03_0212 +
15479850-15479921,15479965-15480083,15480175-15480265,
15480363-15480533
Length = 150
Score = 250 bits (613), Expect = 2e-66
Identities = 130/150 (86%), Positives = 134/150 (89%), Gaps = 14/150 (9%)
Frame = +1
Query: 193 MARTKQTARKSTGGKAPRKQLATK--------------AARKSAPSTGGVKKPHRYRPGT 330
MARTKQTARKSTGGKAPRKQLATK AARKSAP+TGGVKKPHRYRPGT
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKSDFDRWSYITISVQAARKSAPTTGGVKKPHRYRPGT 60
Query: 331 VALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFE 510
VALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQEA+EAYLVGLFE
Sbjct: 61 VALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFE 120
Query: 511 DTNLCAIHAKRVTIMPKDIQLARRIRGERA 600
DTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 121 DTNLCAIHAKRVTIMPKDIQLARRIRGERA 150
>06_01_0425 - 3045557-3046004,3046852-3046856
Length = 150
Score = 227 bits (556), Expect = 1e-59
Identities = 110/119 (92%), Positives = 116/119 (97%)
Frame = +1
Query: 244 RKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQ 423
RKQLATKA KSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQ
Sbjct: 32 RKQLATKATCKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQ 91
Query: 424 DFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 600
DFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 92 DFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 150
>12_02_0048 - 12852335-12852745
Length = 136
Score = 221 bits (539), Expect = 2e-57
Identities = 106/136 (77%), Positives = 120/136 (88%)
Frame = +1
Query: 193 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 372
MARTKQTA+KST PRK L K ARKSAP+ G+KKPHR++PGTVALREIR YQKSTE
Sbjct: 1 MARTKQTAKKSTASNVPRKLLVMKVARKSAPTMAGLKKPHRFKPGTVALREIRTYQKSTE 60
Query: 373 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 552
LLIRKLPFQRLV+EIAQD ++ +RFQS+A+ ALQEA+E YLVGLF+DTNLC IHAKRVTI
Sbjct: 61 LLIRKLPFQRLVQEIAQDVRSYVRFQSSAVVALQEAAETYLVGLFKDTNLCVIHAKRVTI 120
Query: 553 MPKDIQLARRIRGERA 600
MPKDIQLARRIRGE+A
Sbjct: 121 MPKDIQLARRIRGEKA 136
>02_03_0107 -
15303890-15304060,15304158-15304248,15304505-15304614,
15304715-15304784,15306365-15306558
Length = 211
Score = 213 bits (521), Expect = 2e-55
Identities = 112/145 (77%), Positives = 121/145 (83%), Gaps = 10/145 (6%)
Frame = +1
Query: 193 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGV----------KKPHRYRPGTVALR 342
MARTKQTARKSTGGKAPRK L AA APS+ GV KKP R+RPGTVALR
Sbjct: 66 MARTKQTARKSTGGKAPRKPLRAIAAVMPAPSSRGVARKSVPFIGVKKPRRHRPGTVALR 125
Query: 343 EIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNL 522
EIR+YQK+TELLIRKLPFQRLVREIAQ FK D+RFQS A+ ALQEA+EAYLVGLFEDTNL
Sbjct: 126 EIRKYQKNTELLIRKLPFQRLVREIAQHFKHDMRFQSHAVLALQEAAEAYLVGLFEDTNL 185
Query: 523 CAIHAKRVTIMPKDIQLARRIRGER 597
CAIH+KRVTIM KD+QLARRIRGER
Sbjct: 186 CAIHSKRVTIMSKDVQLARRIRGER 210
>12_02_0047 - 12836779-12837189
Length = 136
Score = 209 bits (510), Expect = 5e-54
Identities = 102/136 (75%), Positives = 113/136 (83%)
Frame = +1
Query: 193 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 372
MARTKQTA+KST G PRK L K ARKSAP G+KKPHR+ P VALREIR YQKSTE
Sbjct: 1 MARTKQTAKKSTAGNVPRKLLVMKVARKSAPMMAGLKKPHRFNPWIVALREIRTYQKSTE 60
Query: 373 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 552
LLIRKLPFQRLV+EI QD ++ +RFQS+A+ LQEA+E YLVGLFEDTNLC IHAKRVTI
Sbjct: 61 LLIRKLPFQRLVQEITQDIRSYVRFQSSAMAVLQEAAETYLVGLFEDTNLCVIHAKRVTI 120
Query: 553 MPKDIQLARRIRGERA 600
MPKDIQLAR I GE+A
Sbjct: 121 MPKDIQLARCIGGEKA 136
>02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596
Length = 115
Score = 199 bits (486), Expect = 4e-51
Identities = 97/111 (87%), Positives = 104/111 (93%)
Frame = +1
Query: 265 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 444
AARKSAP GGVKKPHRYRPGTVALREIR+YQK+TELLIRKLPFQRLVREIAQ FK D+R
Sbjct: 4 AARKSAPCIGGVKKPHRYRPGTVALREIRKYQKNTELLIRKLPFQRLVREIAQLFKHDMR 63
Query: 445 FQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 597
FQS A+ ALQEA+EAYLVGLFEDTNLCAIH+KRVTIM KD+QLARRIRGER
Sbjct: 64 FQSHAVLALQEAAEAYLVGLFEDTNLCAIHSKRVTIMSKDVQLARRIRGER 114
>04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392
Length = 106
Score = 143 bits (346), Expect = 4e-34
Identities = 88/136 (64%), Positives = 96/136 (70%)
Frame = +1
Query: 193 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 372
MARTKQTARKSTGGKAPRKQLATKAARKSAP+ T +++ RY
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPT-------------TGGVKKPHRYP---- 43
Query: 373 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 552
P++R TDLRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 44 ------PWKRCS-------STDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 90
Query: 553 MPKDIQLARRIRGERA 600
MPKDIQLARRIRGERA
Sbjct: 91 MPKDIQLARRIRGERA 106
>05_05_0297 -
23921648-23921758,23922011-23922089,23922774-23922822,
23923180-23923255,23923693-23923767,23923862-23923992,
23924830-23924935
Length = 208
Score = 136 bits (329), Expect = 4e-32
Identities = 78/144 (54%), Positives = 98/144 (68%), Gaps = 9/144 (6%)
Frame = +1
Query: 193 MARTKQTARKSTGGKAPRKQLATKAARKS-APSTGGV-------KKPHRYRPGTVALREI 348
MARTK A + + + +K ++ R S A GG +KPHR+RPGTVALREI
Sbjct: 1 MARTKHPAVRKSKAEPKKKLQFERSPRPSKAQRAGGTPRQQTKQRKPHRFRPGTVALREI 60
Query: 349 RRYQKSTELLIRKLPFQRLVREIAQDFKTDL-RFQSAAIGALQEASEAYLVGLFEDTNLC 525
R++QK+TELLI PF RLVREI + D+ R+ A+ ALQEA+E +LV +FE +NLC
Sbjct: 61 RKFQKTTELLIPFAPFSRLVREITDFYSKDVSRWTLEALLALQEAAEYHLVDIFEVSNLC 120
Query: 526 AIHAKRVTIMPKDIQLARRIRGER 597
AIHAKRVTIM KD+QLARRI G R
Sbjct: 121 AIHAKRVTIMQKDMQLARRIGGRR 144
>04_02_0033 - 8997041-8997754
Length = 237
Score = 31.9 bits (69), Expect = 1.4
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 512 TPTFAPSTPNA*PLCLKTSSSPG 580
TPT PSTPN P C++ +PG
Sbjct: 156 TPTATPSTPNGDPFCIRGVRTPG 178
>02_01_0611 -
4567839-4568144,4568280-4569209,4569301-4569566,
4569662-4569970,4570497-4570647,4570958-4571012,
4571137-4571512,4571560-4571797,4571878-4572096,
4572629-4572910
Length = 1043
Score = 30.3 bits (65), Expect = 4.3
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 196 ARTKQTARKS-TGGKAPRKQLATKAARKSAPSTGGVKKPHRYRP 324
AR AR+ GG+ P + LA+ A SA + GG ++P + P
Sbjct: 14 ARAAAAARRHHAGGRDPLRALASLAGDASASAGGGARRPAWFAP 57
>10_02_0068 + 4888273-4889266,4889375-4889397
Length = 338
Score = 29.9 bits (64), Expect = 5.7
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Frame = -3
Query: 606 NLSTLSADSPGELDVFRHNGYAFGVDGAKVGVFKQTHQIGFTGLLQSANGSRLETKIGFK 427
NLST + + + NGY FG VGV QT++ +T L + +R E ++
Sbjct: 74 NLSTTPPATAAGTIILKGNGYYFGDQENPVGV--QTNKSWWTVDLIDIDVTRGEVRVAVP 131
Query: 426 VLSNFS-NESLERQLADQQLRRFLIATNFSKRYSTRAITMG 307
V S+ S NES Q F FS +TR + +G
Sbjct: 132 VSSDCSTNESYHELSIFTQSLNFSTTFLFS---ATRNVLLG 169
>02_05_1052 + 33770355-33773981,33774217-33774336,33774880-33774996,
33775322-33775411,33775971-33776078,33776304-33776351
Length = 1369
Score = 29.5 bits (63), Expect = 7.5
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 8/111 (7%)
Frame = +1
Query: 211 TARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI--RRYQKSTELLIR 384
T+ ++ G +PR++LA+ ST K HR + ALR + R S + +
Sbjct: 737 TSSMASRGTSPRRRLASDGVNALLKSTDFTDKDHRPSTSSAALRGMSPRNRVTSKSIDAK 796
Query: 385 KLPFQR------LVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTN 519
L F +Q ++ S I AL EA + ++G + T+
Sbjct: 797 SLDFSDKDSRPFTPSGASQGTLQEVALASDGINALSEAVDTAVIGSLQSTS 847
>05_04_0149 -
18441561-18442082,18442723-18442861,18443295-18443352,
18443630-18443664,18444528-18444886,18445304-18445450,
18445849-18447954,18448300-18448494,18448629-18448709,
18448758-18448874,18449281-18449370,18449466-18449552,
18450293-18450315,18450675-18450804
Length = 1362
Score = 29.1 bits (62), Expect = 9.9
Identities = 21/93 (22%), Positives = 37/93 (39%)
Frame = -3
Query: 459 GSRLETKIGFKVLSNFSNESLERQLADQQLRRFLIATNFSKRYSTRAITMGFLNSXSTGC 280
G ++G + S+ +L L D+Q+R + NF+ G S +GC
Sbjct: 678 GKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAICIHKWVSGVDQSMCSGC 737
Query: 279 RFSRRFSSQLFARSFTSCRFTGCLLCTCHYSLQ 181
R F+ + + +C C C+ SL+
Sbjct: 738 RLP--FNLRRKRHNCYNCALVFCHACSSKKSLK 768
>03_01_0575 +
4247431-4247489,4248475-4248547,4248792-4249229,
4252122-4253339
Length = 595
Score = 29.1 bits (62), Expect = 9.9
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 319 RPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLV 498
RP V L + Y+ + EL + K F L R+ + + L FQS + E+Y+
Sbjct: 171 RPRPVYLIDFACYKPADELKVSKAEFIDLARKSGKFDEDSLAFQSRLLAKSGIGDESYMP 230
Query: 499 G-LFEDTNLCA 528
+FE CA
Sbjct: 231 RCVFEPGTNCA 241
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,081,692
Number of Sequences: 37544
Number of extensions: 522856
Number of successful extensions: 1140
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4988906440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -