Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_B10_e554_04.seq
         (1513 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    27   0.27 
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    26   0.63 
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    24   2.6  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    23   5.9  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 27.5 bits (58), Expect = 0.27
 Identities = 18/76 (23%), Positives = 35/76 (46%)
 Frame = +1

Query: 472 EAHKEVKIKQEDCNFMRSPSPEVLKRKTQQPNMDDIPCNIKRSPLPDVLKRKKPNIEDIP 651
           E HK  +I ++   F+  P   V++++ ++   DD     K+    +   + KP IED+ 
Sbjct: 192 EEHKIKEIVKKHSQFIGYPIKLVVEKEREKELSDDEAEEEKKEEEGEDKDKDKPKIEDVG 251

Query: 652 CNVKRSPSPDILKRKK 699
            +       +  K+KK
Sbjct: 252 EDEDEDTKKEDKKKKK 267


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 26.2 bits (55), Expect = 0.63
 Identities = 17/91 (18%), Positives = 38/91 (41%)
 Frame = +1

Query: 79  GSVFTCIFIIISTYSIVSGMCETENLIISVEKHPCLWDVNNKDFHNRDIRDLAWEQVCNE 258
           GS    +F  ++T  + +  C+ E+ ++        +      F   D+      Q C  
Sbjct: 2   GSFKPLLFFAVAT--LFAAYCKAESKVVCYYDSKSHFRQGQAKFEITDLEPAL--QYCTH 57

Query: 259 VVHDWETCRDKVNKCAVLRKRWTHIRDYYRK 351
           +++ +    ++  K   L +++  I+D YRK
Sbjct: 58  LIYGYAAIDEETYKLTPLNEQFDVIKDNYRK 88


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = +1

Query: 592 KRSPLPDVLKRKKPNIEDIPCNVKRSPSPDILKRKKPNNRR*PQSDI 732
           + +P P V      N +D     + SP+    K K  NN+R P +++
Sbjct: 417 RSTPSPRVYGNVNEN-QDCSTPTENSPTKPYYKLKTANNKRPPSTEL 462


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 713 DDPNQISNVSLQRDEINGDXNEG 781
           DD N+    S+  +  NGD +EG
Sbjct: 95  DDQNESLEASVNENSKNGDDDEG 117


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 287,215
Number of Sequences: 336
Number of extensions: 5881
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 45374275
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)