Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_B10_e554_04.seq
(1513 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81457-1|CAB03812.1| 423|Caenorhabditis elegans Hypothetical pr... 42 9e-04
AC006661-6|AAF39889.1| 312|Caenorhabditis elegans Hypothetical ... 42 0.002
Z81449-3|CAB03761.1| 300|Caenorhabditis elegans Hypothetical pr... 34 0.30
Z81042-7|CAE46660.1| 371|Caenorhabditis elegans Hypothetical pr... 31 2.1
Z73976-9|CAA98280.2| 371|Caenorhabditis elegans Hypothetical pr... 31 2.1
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 2.1
AF036701-6|AAK68607.1| 139|Caenorhabditis elegans Hypothetical ... 31 2.8
Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical pr... 30 3.7
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 30 3.7
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 30 3.7
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 30 3.7
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 30 3.7
AC006762-10|AAF60556.1| 301|Caenorhabditis elegans Hypothetical... 30 4.9
U97193-1|AAB52438.1| 220|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z93393-17|CAB07693.2| 751|Caenorhabditis elegans Hypothetical p... 29 8.6
>Z81457-1|CAB03812.1| 423|Caenorhabditis elegans Hypothetical
protein C01G12.1 protein.
Length = 423
Score = 42.3 bits (95), Expect = 9e-04
Identities = 25/93 (26%), Positives = 40/93 (43%)
Frame = +1
Query: 154 LIISVEKHPCLWDVNNKDFHNRDIRDLAWEQVCNEVVHDWETCRDKVNKCAVLRKRWTHI 333
LI V K+PCL++ + + + R WE + + D +KRW +
Sbjct: 11 LINEVRKYPCLYNHSRRGSGDTMERQRLWESIAKNI--------DPNCAAEFAKKRWLQL 62
Query: 334 RDYYRKDLQXXXXXXXXXXXXYVYANMLNFLAP 432
RD YRK+L+ + Y N L++L P
Sbjct: 63 RDRYRKELKIAIKNGFVTPVRWCYFNQLSWLDP 95
>AC006661-6|AAF39889.1| 312|Caenorhabditis elegans Hypothetical
protein H20J04.3 protein.
Length = 312
Score = 41.5 bits (93), Expect = 0.002
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1
Query: 139 CETENLIISVEKHPCLWDVNNKDFHNRDIRDLAWEQVCNEV 261
C +NLI+ V +HPCL+DV + + + D R AW + +++
Sbjct: 118 CFGKNLILEVRRHPCLYDVRDPKYRHGDCRTQAWGMIIDKL 158
Score = 31.5 bits (68), Expect = 1.6
Identities = 24/107 (22%), Positives = 45/107 (42%)
Frame = +1
Query: 154 LIISVEKHPCLWDVNNKDFHNRDIRDLAWEQVCNEVVHDWETCRDKVNKCAVLRKRWTHI 333
LI +V CL+D ++ + N + ++ W+++ + D + +L RW +
Sbjct: 10 LIEAVRHSRCLFDNTDRQYRNTEYKNRVWQRLVTVLGFDGDP--------RMLSARWKQL 61
Query: 334 RDYYRKDLQXXXXXXXXXXXXYVYANMLNFLAPLFDKRSCRGNSKTE 474
RD Y K+ + + Y L+FL P R+ S+ E
Sbjct: 62 RDKYGKEKR--KQKYGNEKSSWQYFKHLHFLDPHMTDRAEISPSRKE 106
>Z81449-3|CAB03761.1| 300|Caenorhabditis elegans Hypothetical
protein C46F11.3 protein.
Length = 300
Score = 33.9 bits (74), Expect = 0.30
Identities = 25/100 (25%), Positives = 42/100 (42%)
Frame = +1
Query: 151 NLIISVEKHPCLWDVNNKDFHNRDIRDLAWEQVCNEVVHDWETCRDKVNKCAVLRKRWTH 330
++I +V K P LWD N ++ AW+Q+ D E D+ A ++ W
Sbjct: 135 DIIYAVRKRPILWDQRLICHRNSNLSRRAWDQL------DLELGIDEEYPLARRKQIWKS 188
Query: 331 IRDYYRKDLQXXXXXXXXXXXXYVYANMLNFLAPLFDKRS 450
RDY+ ++YA+ L F P+ + R+
Sbjct: 189 KRDYF------VSAVNAANLRKWIYADALEFYRPMINFRT 222
>Z81042-7|CAE46660.1| 371|Caenorhabditis elegans Hypothetical
protein T07C12.11 protein.
Length = 371
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Frame = +1
Query: 154 LIISVEKHPCLWDVNNKDFHNRDIRDLAWEQVCNEVVHDWETCRDKVNKCAVLRKRWTHI 333
LI SV+++PC+++ + D + W+ + E+ +D + L ++W H+
Sbjct: 22 LIDSVQRNPCVYNRYDPLHKVTDYKHEIWKLISIEIGYDGQPVE--------LERKWKHM 73
Query: 334 RDYY--RKDLQXXXXXXXXXXXXYVYANMLNFLAPLFDKRS 450
RD Y + Y Y + ++FL P + R+
Sbjct: 74 RDKYVRLRKQDKQKAPIKKTNKWYNYYHKMSFLDPYVEHRN 114
>Z73976-9|CAA98280.2| 371|Caenorhabditis elegans Hypothetical
protein T07C12.11 protein.
Length = 371
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Frame = +1
Query: 154 LIISVEKHPCLWDVNNKDFHNRDIRDLAWEQVCNEVVHDWETCRDKVNKCAVLRKRWTHI 333
LI SV+++PC+++ + D + W+ + E+ +D + L ++W H+
Sbjct: 22 LIDSVQRNPCVYNRYDPLHKVTDYKHEIWKLISIEIGYDGQPVE--------LERKWKHM 73
Query: 334 RDYY--RKDLQXXXXXXXXXXXXYVYANMLNFLAPLFDKRS 450
RD Y + Y Y + ++FL P + R+
Sbjct: 74 RDKYVRLRKQDKQKAPIKKTNKWYNYYHKMSFLDPYVEHRN 114
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.1 bits (67), Expect = 2.1
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 1386 PQGTLGPSPXVXGXXPGPXGPXXKXXXPPPXPG 1484
P G P P G GP GP PP PG
Sbjct: 386 PPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPG 418
>AF036701-6|AAK68607.1| 139|Caenorhabditis elegans Hypothetical
protein ZC416.1 protein.
Length = 139
Score = 30.7 bits (66), Expect = 2.8
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +1
Query: 154 LIISVEKHPCLWDVNNKDFHNRDIRDLAWEQVCNEVVHDWETCRDKVNKCAVLRKRWTHI 333
LI V+ P L+D +++ ++ R+ AW E+ + ET + V + RW +
Sbjct: 53 LIAEVKARPFLYDQSDEGYNLLSWRNSAWN----EIAENLETTSEHV------KTRWKTL 102
Query: 334 RDYYRKD 354
RD Y+K+
Sbjct: 103 RDRYKKE 109
>Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical
protein F48C11.2 protein.
Length = 708
Score = 30.3 bits (65), Expect = 3.7
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 577 IPCNIKRSPLPDVLKRKKPNIEDIPCNVKRSPSPDILKRKKPNN 708
IP N R+P P + + + + +P N R+ P + ++KPNN
Sbjct: 473 IPLNFSRNPKPMMPEPQSHDDIPLPVNKSRNTVPPPVMQQKPNN 516
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = +1
Query: 520 RSPSPEVLKRKTQQPNM---DDIPCNIKRSPLPDVLKRKKPNIEDI--PCNVKRSPSPDI 684
+ SPE + K P +++ ++SP K K P E++ P ++SPS
Sbjct: 1382 KEKSPEKTEEKPASPTKKTGEEVKSPKEKSPASPTKKEKSPAAEEVKSPTKKEKSPSSPT 1441
Query: 685 LKRKKPNN 708
K K P++
Sbjct: 1442 KKEKSPSS 1449
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = +1
Query: 520 RSPSPEVLKRKTQQPNM---DDIPCNIKRSPLPDVLKRKKPNIEDI--PCNVKRSPSPDI 684
+ SPE + K P +++ ++SP K K P E++ P ++SPS
Sbjct: 1382 KEKSPEKTEEKPASPTKKTGEEVKSPKEKSPASPTKKEKSPAAEEVKSPTKKEKSPSSPT 1441
Query: 685 LKRKKPNN 708
K K P++
Sbjct: 1442 KKEKSPSS 1449
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = +1
Query: 520 RSPSPEVLKRKTQQPNM---DDIPCNIKRSPLPDVLKRKKPNIEDI--PCNVKRSPSPDI 684
+ SPE + K P +++ ++SP K K P E++ P ++SPS
Sbjct: 1382 KEKSPEKTEEKPASPTKKTGEEVKSPKEKSPASPTKKEKSPAAEEVKSPTKKEKSPSSPT 1441
Query: 685 LKRKKPNN 708
K K P++
Sbjct: 1442 KKEKSPSS 1449
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = +1
Query: 520 RSPSPEVLKRKTQQPNM---DDIPCNIKRSPLPDVLKRKKPNIEDI--PCNVKRSPSPDI 684
+ SPE + K P +++ ++SP K K P E++ P ++SPS
Sbjct: 1382 KEKSPEKTEEKPASPTKKTGEEVKSPKEKSPASPTKKEKSPAAEEVKSPTKKEKSPSSPT 1441
Query: 685 LKRKKPNN 708
K K P++
Sbjct: 1442 KKEKSPSS 1449
>AC006762-10|AAF60556.1| 301|Caenorhabditis elegans Hypothetical
protein Y42G9A.1 protein.
Length = 301
Score = 29.9 bits (64), Expect = 4.9
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 472 EAHKEVKIKQEDCNFMRSPSPEVLKRKTQQPNMDDIPCNIKRSPLPD 612
+A + + ++ D +F + P P R PN DD+ + RSP D
Sbjct: 251 KARRREESEESDVSFSKKPRPS--SRSPASPNRDDLLLGLDRSPPSD 295
>U97193-1|AAB52438.1| 220|Caenorhabditis elegans Hypothetical
protein C06A5.4 protein.
Length = 220
Score = 29.5 bits (63), Expect = 6.5
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +1
Query: 133 GMCETENLIISVEKHPCLWDVNNKDFHNRDIRDL-AW---EQVCN 255
G E E + V P LW + DFH + + + AW E+ CN
Sbjct: 86 GRSEMEQFLRLVSDKPFLWHTKDSDFHRKKEKGMPAWAEIERTCN 130
>Z93393-17|CAB07693.2| 751|Caenorhabditis elegans Hypothetical
protein Y48E1B.7 protein.
Length = 751
Score = 29.1 bits (62), Expect = 8.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 445 RSCRGNSKTEAHKEVKIKQEDCNFMRSPSPEVLKRKTQQPNMDDIPCNIKRSPL 606
R RGN K +K+ ++ CN +++ S R P+++++P N KR L
Sbjct: 268 RMARGNKK---NKKGMVQYFRCNRLQTLSRSQTFRPVDNPSLEELPTNRKRGRL 318
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,453,406
Number of Sequences: 27780
Number of extensions: 545911
Number of successful extensions: 1587
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1578
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4360398082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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