Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_B10_e554_04.seq
         (1513 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   6.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   6.9  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   9.1  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   9.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   9.1  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +2

Query: 398 TCTLICLISSHRYLINVVVEEIRKQKHTKR*KSNKK 505
           T TL+CL S   Y+I    ++  ++K T   KS K+
Sbjct: 749 TVTLVCLYSPKIYIILFQPDKNIRRKVTMGDKSKKQ 784


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +2

Query: 398 TCTLICLISSHRYLINVVVEEIRKQKHTKR*KSNKK 505
           T TL+CL S   Y+I    ++  ++K T   KS K+
Sbjct: 839 TVTLVCLYSPKIYIILFQPDKNIRRKVTMGDKSKKQ 874


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -3

Query: 524 DRIKLQSSCLIFTSLCASVFEFPR 453
           D I L   CL+FT     V E PR
Sbjct: 122 DNIFLPEDCLLFTIELDRVLESPR 145


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -3

Query: 524 DRIKLQSSCLIFTSLCASVFEFPR 453
           D I L   CL+FT     V E PR
Sbjct: 137 DNIFLPEDCLLFTIELDRVLESPR 160


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 13/80 (16%)
 Frame = +1

Query: 487 VKIKQEDCNFMRSPSPEVLKRKTQQPNMDDIP----CNIKRSPLP---------DVLKRK 627
           V+   + C+F R     +L R  + PN    P    C +  +P P         D  KR 
Sbjct: 183 VQAHLDTCDFTRDKVAPILVRARETPNYTACPPTLACPLNPNPQPLTGQQELLQDFSKRF 242

Query: 628 KPNIEDIPCNVKRSPSPDIL 687
            P I  +    KR P   +L
Sbjct: 243 SPAIRGVVEFAKRIPGFSLL 262


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 346,239
Number of Sequences: 438
Number of extensions: 7355
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 52874250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)