Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_B09_e546_03.seq
(1524 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB79EC Cluster: PREDICTED: similar to mitochondr... 203 8e-51
UniRef50_Q9VMX0 Cluster: 39S ribosomal protein L28, mitochondria... 199 2e-49
UniRef50_UPI00015B5D75 Cluster: PREDICTED: similar to GA17686-PA... 179 2e-43
UniRef50_UPI0000E46F94 Cluster: PREDICTED: similar to MGC84279 p... 100 1e-19
UniRef50_Q13084 Cluster: 39S ribosomal protein L28, mitochondria... 96 2e-18
UniRef50_O76606 Cluster: Putative uncharacterized protein T25D3.... 91 7e-17
UniRef50_Q5D9B2 Cluster: SJCHGC01033 protein; n=2; Schistosoma j... 74 9e-12
UniRef50_Q8N8G8 Cluster: CDNA FLJ39525 fis, clone PUAEN2002758; ... 55 6e-06
UniRef50_Q4TDV8 Cluster: Chromosome undetermined SCAF6006, whole... 50 2e-04
UniRef50_A7S0T2 Cluster: Predicted protein; n=1; Nematostella ve... 44 0.008
UniRef50_Q54TR3 Cluster: Putative uncharacterized protein; n=1; ... 40 0.13
UniRef50_A2QJ62 Cluster: Contig An04c0180, complete genome; n=8;... 39 0.30
UniRef50_P36525 Cluster: 54S ribosomal protein L24, mitochondria... 38 0.53
UniRef50_O60091 Cluster: Mitochondrial ribosomal protein subunit... 38 0.69
UniRef50_Q6CFD6 Cluster: Similar to CAGL0K10912g Candida glabrat... 38 0.92
UniRef50_A6QWB5 Cluster: Putative uncharacterized protein; n=1; ... 37 1.6
UniRef50_Q5PAC9 Cluster: 50S ribosomal protein L28; n=6; Anaplas... 37 1.6
UniRef50_A0L5U1 Cluster: Ribosomal protein L28; n=1; Magnetococc... 36 2.8
UniRef50_Q2RQE3 Cluster: Putative uncharacterized protein; n=1; ... 35 6.5
UniRef50_A4RWI5 Cluster: Putative mitochondrial ribosomal protei... 35 6.5
UniRef50_UPI000150AA2C Cluster: ribosomal protein L28 containing... 34 8.6
UniRef50_A4B0I5 Cluster: Sensor protein; n=1; Alteromonas macleo... 34 8.6
>UniRef50_UPI0000DB79EC Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L28 CG3782-PA; n=1; Apis
mellifera|Rep: PREDICTED: similar to mitochondrial
ribosomal protein L28 CG3782-PA - Apis mellifera
Length = 274
Score = 203 bits (496), Expect = 8e-51
Identities = 87/139 (62%), Positives = 110/139 (79%)
Frame = +3
Query: 183 KKNRFDIGIASELPAAYKKFWREWKLLKPAAVHFVPQEGKWKRDELTGETLPIQNIPIPL 362
K R+ GI +ELP YKKFWREWK+ P AVH++ QEGK+ R+E T E P+QNIP+PL
Sbjct: 15 KPTRWSKGIGAELPQEYKKFWREWKIQIPTAVHYIKQEGKYVRNEETEEVYPVQNIPLPL 74
Query: 363 KYPAEIHEGIWGGEAVVKGFQKRDPRRRRVPHYWVPILKRTVVRSEVLNTHLSVTVTDRT 542
YP E H+GIWGGEAV++GF K++ RR PH+W P LK++VV SEVL+T+LSV +T+RT
Sbjct: 75 LYPKEFHQGIWGGEAVIQGFTKKNKYARRHPHFWFPTLKKSVVYSEVLDTYLSVVITNRT 134
Query: 543 IRLINDHYGFDHYLLKTPS 599
I LIN+HYGFDHYLLKTP+
Sbjct: 135 IDLINEHYGFDHYLLKTPA 153
>UniRef50_Q9VMX0 Cluster: 39S ribosomal protein L28, mitochondrial
precursor; n=4; Diptera|Rep: 39S ribosomal protein L28,
mitochondrial precursor - Drosophila melanogaster (Fruit
fly)
Length = 302
Score = 199 bits (485), Expect = 2e-49
Identities = 94/192 (48%), Positives = 129/192 (67%)
Frame = +3
Query: 162 QLSKTFKKKNRFDIGIASELPAAYKKFWREWKLLKPAAVHFVPQEGKWKRDELTGETLPI 341
+L +K+ RFD G+ ++LP AY+KFWREWKL PAAVH++P+E +W+RDE+T P+
Sbjct: 10 KLLNGWKRPGRFDKGLGAQLPEAYRKFWREWKLTTPAAVHYIPKEQQWERDEVTHAIKPV 69
Query: 342 QNIPIPLKYPAEIHEGIWGGEAVVKGFQKRDPRRRRVPHYWVPILKRTVVRSEVLNTHLS 521
QNIP+PL E H GIWGGEAV+KGFQKR+ +RRVPH+WVP L+R+VV S VL+ ++S
Sbjct: 70 QNIPLPLIDTPESHRGIWGGEAVIKGFQKREQTKRRVPHFWVPNLRRSVVHSHVLDCYMS 129
Query: 522 VTVTDRTIRLINDHYGFDHYLLKTPSMPFSIHARLQN*RSKY*QNLMNGCPKICXCXXRN 701
V VT+RT+ I++ +GFDHYLLK + L+ R Q L NG P + R
Sbjct: 130 VVVTERTLEQIHECHGFDHYLLKNRACDLRSALALKLKREVL-QALQNGVPALADEPERQ 188
Query: 702 RKXCMKNTXTYL 737
++ +K YL
Sbjct: 189 QE-VLKEYRRYL 199
>UniRef50_UPI00015B5D75 Cluster: PREDICTED: similar to GA17686-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA17686-PA - Nasonia vitripennis
Length = 279
Score = 179 bits (436), Expect = 2e-43
Identities = 76/137 (55%), Positives = 107/137 (78%)
Frame = +3
Query: 183 KKNRFDIGIASELPAAYKKFWREWKLLKPAAVHFVPQEGKWKRDELTGETLPIQNIPIPL 362
K R+ GI + LP YKKFW+EWK+ KPA VH++P+ G+W++ +G+ LP+QNIP+PL
Sbjct: 17 KVTRWSNGIGAALPEEYKKFWKEWKVQKPAPVHYIPKPGRWEKKP-SGDILPVQNIPLPL 75
Query: 363 KYPAEIHEGIWGGEAVVKGFQKRDPRRRRVPHYWVPILKRTVVRSEVLNTHLSVTVTDRT 542
KYP EI +GIWGGEAVV+GF K+ + RRVPH+WVP L ++V+ SE+L+ ++ VT R
Sbjct: 76 KYPKEIDQGIWGGEAVVQGFTKKF-KHRRVPHFWVPKLLKSVIYSEILDKYVKTIVTYRA 134
Query: 543 IRLINDHYGFDHYLLKT 593
++LI+D+YGFDHY+LKT
Sbjct: 135 LQLIHDNYGFDHYVLKT 151
>UniRef50_UPI0000E46F94 Cluster: PREDICTED: similar to MGC84279
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to MGC84279 protein -
Strongylocentrotus purpuratus
Length = 306
Score = 100 bits (239), Expect = 1e-19
Identities = 56/170 (32%), Positives = 95/170 (55%), Gaps = 7/170 (4%)
Frame = +3
Query: 111 VTLKLSMASSRLQSTARQLSKTFK---KKNRFDI---GIASELPAAYKKFWREWKLLKPA 272
++LK ++ + L+ + F+ KK+ +I GI S LP AY K+ R +P+
Sbjct: 8 ISLKYNVIAENLKRAPKPEHINFRGKTKKDPMEIYRDGIGSRLPEAYFKWNRIG--FEPS 65
Query: 273 AVHFVPQEGKWKRDELTGETLPIQNIPIPLKYPAEIHEGIWGGEAVVKGFQK-RDPRRRR 449
AVH+ + +W++D +TG+ + +PI YP E G+WGGE VKG++K + R R
Sbjct: 66 AVHWDDKGVEWEKDPITGDRKRVNRVPIQAYYPPEARVGLWGGEGWVKGYRKSKGDRGVR 125
Query: 450 VPHYWVPILKRTVVRSEVLNTHLSVTVTDRTIRLINDHYGFDHYLLKTPS 599
+ W + + SE+L+ + T+R + LI++ YGFD Y+L+TP+
Sbjct: 126 LNKTWKTYVATRKLESEILDKKFEIPATNRVMDLIDEAYGFDFYILQTPA 175
>UniRef50_Q13084 Cluster: 39S ribosomal protein L28, mitochondrial
precursor; n=28; Euteleostomi|Rep: 39S ribosomal protein
L28, mitochondrial precursor - Homo sapiens (Human)
Length = 256
Score = 95.9 bits (228), Expect = 2e-18
Identities = 49/133 (36%), Positives = 73/133 (54%), Gaps = 2/133 (1%)
Frame = +3
Query: 204 GIASELPAAYKKFWREWKLLKPAAVHFVPQEGKWKRDELTGETLPIQNIPIPLKYPAEIH 383
GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+ +P E
Sbjct: 19 GICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPIYFPPESQ 76
Query: 384 EGIWGGEAVVKG--FQKRDPRRRRVPHYWVPILKRTVVRSEVLNTHLSVTVTDRTIRLIN 557
G+WGGE + G + D +R+ W P L SE+L+ +VTVT RT+ LI+
Sbjct: 77 RGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTMRTLDLID 136
Query: 558 DHYGFDHYLLKTP 596
+ YG D Y+LKTP
Sbjct: 137 EAYGLDFYILKTP 149
>UniRef50_O76606 Cluster: Putative uncharacterized protein T25D3.2;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein T25D3.2 - Caenorhabditis elegans
Length = 310
Score = 91.1 bits (216), Expect = 7e-17
Identities = 47/136 (34%), Positives = 77/136 (56%), Gaps = 7/136 (5%)
Frame = +3
Query: 207 IASELPAAYKKFWREWKLLKPAAVHFVPQEGKWKRDELTGETLPIQNIPIPLKYPAEIHE 386
+ LP YK + E L VH+ P ++ D + ++ PI E +
Sbjct: 41 VVHRLPEHYKTRYWETILSDKTPVHYRPPTSRFAHDSFKNVEIELEENPIIGIRTPEGDD 100
Query: 387 GIWGGEAVVKGFQKRDP--RRRRVPHYWVP-----ILKRTVVRSEVLNTHLSVTVTDRTI 545
G+WGGE VVKG+ + P +++ +P YWVP LK V+ SE+L+ ++ VTVT+R +
Sbjct: 101 GLWGGERVVKGWIESAPYTKKKILPRYWVPKLFFPALKNVVLYSEILDKYIKVTVTERAM 160
Query: 546 RLINDHYGFDHYLLKT 593
RLI++H+G D+Y+L++
Sbjct: 161 RLIDEHFGLDYYILES 176
>UniRef50_Q5D9B2 Cluster: SJCHGC01033 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC01033 protein - Schistosoma
japonicum (Blood fluke)
Length = 260
Score = 74.1 bits (174), Expect = 9e-12
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Frame = +3
Query: 309 RDELTGETLPIQNIPIPLK--YPAEIHEGIWGGEAVVKGFQKRDPRRRRVPHYWVPILKR 482
+D TG LP PL YP E + +WGGE +++G+ ++ +R + P W P+L
Sbjct: 44 KDGQTGNVLPSSYFDTPLNIIYPPESQKCLWGGEGIIQGYWEKKNQRPKFPKAWRPVLME 103
Query: 483 TVVRSEVLNTHLSVTVTDRTIRLINDHYGFDHYLLKTP 596
+ SE+L+ + + V+D ++ I + GFD Y+L TP
Sbjct: 104 NLFYSEILDRWMVIIVSDSALKQIENAGGFDFYILSTP 141
>UniRef50_Q8N8G8 Cluster: CDNA FLJ39525 fis, clone PUAEN2002758;
n=1; Homo sapiens|Rep: CDNA FLJ39525 fis, clone
PUAEN2002758 - Homo sapiens (Human)
Length = 158
Score = 54.8 bits (126), Expect = 6e-06
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = +3
Query: 204 GIASELPAAYKKFWREWKLLKPAAVHFVPQEGKWKRDELTGETLPIQNIPIPLKYPAEIH 383
GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+ +P E
Sbjct: 19 GICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPIYFPPESQ 76
Query: 384 EGIWGGEAVVKG 419
G+WGGE + G
Sbjct: 77 RGLWGGEGWILG 88
>UniRef50_Q4TDV8 Cluster: Chromosome undetermined SCAF6006, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF6006,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 157
Score = 49.6 bits (113), Expect = 2e-04
Identities = 23/50 (46%), Positives = 33/50 (66%)
Frame = +3
Query: 447 RVPHYWVPILKRTVVRSEVLNTHLSVTVTDRTIRLINDHYGFDHYLLKTP 596
R+ W P L + + SE+L+ ++TVT RT+ LI+ YGFD Y+LKTP
Sbjct: 4 RLKKTWKPQLFKRELYSEILDHKFTITVTARTLDLIDAAYGFDFYILKTP 53
>UniRef50_A7S0T2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 113
Score = 44.4 bits (100), Expect = 0.008
Identities = 25/87 (28%), Positives = 40/87 (45%)
Frame = +3
Query: 369 PAEIHEGIWGGEAVVKGFQKRDPRRRRVPHYWVPILKRTVVRSEVLNTHLSVTVTDRTIR 548
P H GI+ G+ ++ G + ++ W P + R SEVL +LS T +R
Sbjct: 15 PKRAHAGIYAGKGIMFGHVETFSGKK-TKRAWKPNVHRKKYYSEVLEKNLSYNFTTHAMR 73
Query: 549 LINDHYGFDHYLLKTPSMPFSIHARLQ 629
I+ GFD+Y+L T A ++
Sbjct: 74 CIDKAGGFDNYILNTKDSKLQSKAAIE 100
>UniRef50_Q54TR3 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 142
Score = 40.3 bits (90), Expect = 0.13
Identities = 20/69 (28%), Positives = 39/69 (56%)
Frame = +3
Query: 387 GIWGGEAVVKGFQKRDPRRRRVPHYWVPILKRTVVRSEVLNTHLSVTVTDRTIRLINDHY 566
G++GG+ ++ Q R+ W P ++ S+VL++++ V++T TIR I+
Sbjct: 23 GLYGGKDIIFSDQSSFSTRK-TRRTWKPNVQTKTYHSDVLDSNIRVSLTTYTIRCIDKAG 81
Query: 567 GFDHYLLKT 593
FD+Y++ T
Sbjct: 82 SFDNYIIHT 90
>UniRef50_A2QJ62 Cluster: Contig An04c0180, complete genome; n=8;
Eurotiomycetidae|Rep: Contig An04c0180, complete genome
- Aspergillus niger
Length = 299
Score = 39.1 bits (87), Expect = 0.30
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 381 HEGIWGGEAVVKGFQKRDPRRR-RVPHYWVPILKRTVVRSEVLNTHLSVTVTDRTIRLIN 557
+ G++GG + G + R + +W P ++R + SE L L + VT + +R I
Sbjct: 150 NSGLYGGAMIQFGNKISQGRNEGKTRRFWKPNVRRKKLYSEALGEDLFIKVTRKALRTIR 209
Query: 558 DHYGFDHYLL 587
G D+YLL
Sbjct: 210 KAGGLDNYLL 219
>UniRef50_P36525 Cluster: 54S ribosomal protein L24, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 54S ribosomal
protein L24, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 258
Score = 38.3 bits (85), Expect = 0.53
Identities = 20/73 (27%), Positives = 38/73 (52%)
Frame = +3
Query: 381 HEGIWGGEAVVKGFQKRDPRRRRVPHYWVPILKRTVVRSEVLNTHLSVTVTDRTIRLIND 560
++G++GG V G + + W+P + + + SE LN +S+ +T + ++ I+
Sbjct: 70 NKGLYGGSFVQFG-NNISESKAKTRKKWLPNVVKKGLWSETLNRKISIKMTAKVLKTISK 128
Query: 561 HYGFDHYLLKTPS 599
G D+YL K S
Sbjct: 129 EGGIDNYLTKEKS 141
>UniRef50_O60091 Cluster: Mitochondrial ribosomal protein subunit
L28; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit L28 - Schizosaccharomyces
pombe (Fission yeast)
Length = 176
Score = 37.9 bits (84), Expect = 0.69
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +3
Query: 372 AEIHEGIWGGEAVVKGFQKRDPRRRRVPHYWVPILKRTVVRSEVLNTHLSVTVTDRTIRL 551
++ + ++GG G K + W+P + S VL + VT R +R
Sbjct: 25 SKFQQNLYGGSKTEAGNNKIPKFGHKTRRVWIPNGHSKWLYSNVLEEKFHLYVTSRVLRT 84
Query: 552 INDHYGFDHYLLK-TPSMPFSIHAR 623
I+ G D YL+K TPS S+ R
Sbjct: 85 IDKEGGLDEYLVKSTPSRLKSLGLR 109
>UniRef50_Q6CFD6 Cluster: Similar to CAGL0K10912g Candida glabrata;
n=1; Yarrowia lipolytica|Rep: Similar to CAGL0K10912g
Candida glabrata - Yarrowia lipolytica (Candida
lipolytica)
Length = 299
Score = 37.5 bits (83), Expect = 0.92
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 390 IWGGEAVVKGFQKRDPRRRRVPHYWVPILKRTVVRSEVLNTHLSVTVTDRTIRLINDHYG 569
++GG + G++ + R + + W P ++T + SE L ++ +T R + I G
Sbjct: 89 LFGGRTLGNGYRSSEFRNKTL-RKWKPNAQKTTLPSEALGKNVRITTVPRVLSTIRREGG 147
Query: 570 FDHYLLK-TP 596
D YL K TP
Sbjct: 148 LDAYLTKDTP 157
>UniRef50_A6QWB5 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 191
Score = 36.7 bits (81), Expect = 1.6
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 357 PLKYPAEIHEGIWGGEAVVKGFQKRDPRRR-RVPHYWVPILKRTVVRSEVLNTHLSVTVT 533
P ++ + + G++GG + G + R + + W P ++ + SE L L + V
Sbjct: 49 PARFFKQSNTGLYGGSTIQFGNKISKGRNKGKTRRTWKPNIRHEELYSEALGKTLQLKVQ 108
Query: 534 DRTIRLINDHYGFDHYLL 587
R +R I G D YLL
Sbjct: 109 HRVLRTIKKVGGLDQYLL 126
>UniRef50_Q5PAC9 Cluster: 50S ribosomal protein L28; n=6;
Anaplasmataceae|Rep: 50S ribosomal protein L28 -
Anaplasma marginale (strain St. Maries)
Length = 103
Score = 36.7 bits (81), Expect = 1.6
Identities = 22/60 (36%), Positives = 29/60 (48%)
Frame = +3
Query: 444 RRVPHYWVPILKRTVVRSEVLNTHLSVTVTDRTIRLINDHYGFDHYLLKTPSMPFSIHAR 623
R+ ++ L + SEVL + V RT+R IN GFD YLL T S S A+
Sbjct: 23 RKTKRSYLVNLHNVTLVSEVLGRKFKMKVAARTLRTINYKGGFDLYLLNTASRKLSDEAQ 82
>UniRef50_A0L5U1 Cluster: Ribosomal protein L28; n=1; Magnetococcus
sp. MC-1|Rep: Ribosomal protein L28 - Magnetococcus sp.
(strain MC-1)
Length = 95
Score = 35.9 bits (79), Expect = 2.8
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +3
Query: 396 GGEAVVKGFQKRDPRRRRVPHYWVPILKRTVVRSEVLNTHLSVTVTDRTIRLINDHYGFD 575
GG+A G K +R+ W+P ++ + S L + VT++ +R +++ G D
Sbjct: 8 GGKAPQAG-NKVSHSQRKTRRQWMPNIQTKALWSITLGQSVKVTISTSALRSVDNAGGLD 66
Query: 576 HYLLK 590
+YLLK
Sbjct: 67 NYLLK 71
>UniRef50_Q2RQE3 Cluster: Putative uncharacterized protein; n=1;
Rhodospirillum rubrum ATCC 11170|Rep: Putative
uncharacterized protein - Rhodospirillum rubrum (strain
ATCC 11170 / NCIB 8255)
Length = 937
Score = 34.7 bits (76), Expect = 6.5
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 204 GIASELPAAYKKFWREWKLLKPAAVHFVPQEGKWKRDELTGETLPI 341
G ++L AY+ WR W P H P+ G W +E+ P+
Sbjct: 891 GFVADLEGAYRAMWRRW-CAGPPTFHRQPKNGMWAVEEMEDAIEPV 935
>UniRef50_A4RWI5 Cluster: Putative mitochondrial ribosomal protein
L28; n=1; Ostreococcus lucimarinus CCE9901|Rep: Putative
mitochondrial ribosomal protein L28 - Ostreococcus
lucimarinus CCE9901
Length = 125
Score = 34.7 bits (76), Expect = 6.5
Identities = 17/69 (24%), Positives = 34/69 (49%)
Frame = +3
Query: 387 GIWGGEAVVKGFQKRDPRRRRVPHYWVPILKRTVVRSEVLNTHLSVTVTDRTIRLINDHY 566
G++ G+ + G + + W+P ++ V SE+L + + VT +R ++
Sbjct: 24 GLFAGKHIKFGNNVSEDGGNKTRRRWLPNAQKKRVYSELLEEMIPMRVTAHALRCMDKAG 83
Query: 567 GFDHYLLKT 593
G D Y+L+T
Sbjct: 84 GLDEYILRT 92
>UniRef50_UPI000150AA2C Cluster: ribosomal protein L28 containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
ribosomal protein L28 containing protein - Tetrahymena
thermophila SB210
Length = 289
Score = 34.3 bits (75), Expect = 8.6
Identities = 16/70 (22%), Positives = 38/70 (54%)
Frame = +3
Query: 384 EGIWGGEAVVKGFQKRDPRRRRVPHYWVPILKRTVVRSEVLNTHLSVTVTDRTIRLINDH 563
+G++ G+ G Q ++ + +W + + S++L + + ++ +T+R I+ +
Sbjct: 62 KGLFHGKQPKTGLQTCFSEKKSI-RWWKVNVHEKYLWSDILQKKIRIQMSSKTLRTIDKY 120
Query: 564 YGFDHYLLKT 593
GFD+Y+L T
Sbjct: 121 GGFDNYVLLT 130
>UniRef50_A4B0I5 Cluster: Sensor protein; n=1; Alteromonas macleodii
'Deep ecotype'|Rep: Sensor protein - Alteromonas
macleodii 'Deep ecotype'
Length = 884
Score = 34.3 bits (75), Expect = 8.6
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1
Query: 108 HKTNYI*MYPRAELPAARGIPLVSRSGRXR 19
+KTN++ + P ELP AR +P V SGR R
Sbjct: 218 YKTNWVRLTPDTELPPARLVPSVEESGRKR 247
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 935,611,444
Number of Sequences: 1657284
Number of extensions: 16011597
Number of successful extensions: 30887
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 30079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30871
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 162521628425
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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