Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_B08_e538_04.seq
         (1538 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY326467-1|AAR99517.1|   82|Homo sapiens putative protein STRF6 ...    33   3.7  
AK129724-1|BAC85228.1|  424|Homo sapiens protein ( Homo sapiens ...    33   3.7  
AF253979-1|AAG44628.1|  149|Homo sapiens DC24 protein.                 33   3.7  
BC012121-1|AAH12121.1|  555|Homo sapiens SLC9A1 protein protein.       32   4.9  
AL590640-7|CAH73555.1|  555|Homo sapiens solute carrier family 9...    32   4.9  
AL137860-4|CAI22089.1|  555|Homo sapiens solute carrier family 9...    32   4.9  

>AY326467-1|AAR99517.1|   82|Homo sapiens putative protein STRF6
           protein.
          Length = 82

 Score = 32.7 bits (71), Expect = 3.7
 Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
 Frame = -1

Query: 575 QPSLSNQQR----LIQPSRMDKLNRSQSFHSHKTQIVQHNSLHSHNTHILKLF*T*LYIK 408
           QP+ + ++R    ++ PSR+       + HS   ++ +H++ HSH    +KL    L  +
Sbjct: 3   QPARTPERRHILPILHPSRLPSPTHRTNLHSQHPRLTKHSTTHSHCPRTIKL----LSQQ 58

Query: 407 TSMYNTHNNQHS 372
            +M + HN+ +S
Sbjct: 59  LNMTSLHNSFYS 70


>AK129724-1|BAC85228.1|  424|Homo sapiens protein ( Homo sapiens
           cDNA FLJ26213 fis, clone ADG07906. ).
          Length = 424

 Score = 32.7 bits (71), Expect = 3.7
 Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
 Frame = -1

Query: 575 QPSLSNQQR----LIQPSRMDKLNRSQSFHSHKTQIVQHNSLHSHNTHILKLF*T*LYIK 408
           QP+ + ++R    ++ PSR+       + HS   ++ +H++ HSH    +KL    L  +
Sbjct: 345 QPARTPERRHILPILHPSRLPSPTHRTNLHSQHPRLTKHSTTHSHCPRTIKL----LSQQ 400

Query: 407 TSMYNTHNNQHS 372
            +M + HN+ +S
Sbjct: 401 LNMTSLHNSFYS 412


>AF253979-1|AAG44628.1|  149|Homo sapiens DC24 protein.
          Length = 149

 Score = 32.7 bits (71), Expect = 3.7
 Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
 Frame = -1

Query: 575 QPSLSNQQR----LIQPSRMDKLNRSQSFHSHKTQIVQHNSLHSHNTHILKLF*T*LYIK 408
           QP+ + ++R    ++ PSR+       + HS   ++ +H++ HSH    +KL    L  +
Sbjct: 3   QPARTPERRHILPILHPSRLPSPTHRTNLHSQHPRLTKHSTTHSHCPRTIKL----LSQQ 58

Query: 407 TSMYNTHNNQHS 372
            +M + HN+ +S
Sbjct: 59  LNMTSLHNSFYS 70


>BC012121-1|AAH12121.1|  555|Homo sapiens SLC9A1 protein protein.
          Length = 555

 Score = 32.3 bits (70), Expect = 4.9
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = +1

Query: 55  PGCRXFGTRLVAVLFEKPRXWCTNQHRVQG-VGEEHFLRPLRTSRVCSLRADGGPRLSTN 231
           P C  F T ++ V+F         Q R    +G+ H L P +  + C L+ D  P  +TN
Sbjct: 475 PMCDLFLTAIITVIFFTVFVQVLGQGRAGPCLGDPHRLFPWKERKACDLKCDSSPSSTTN 534


>AL590640-7|CAH73555.1|  555|Homo sapiens solute carrier family 9
           (sodium/hydrogen exchanger), member 1 (antiporter, Na+/
           protein.
          Length = 555

 Score = 32.3 bits (70), Expect = 4.9
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = +1

Query: 55  PGCRXFGTRLVAVLFEKPRXWCTNQHRVQG-VGEEHFLRPLRTSRVCSLRADGGPRLSTN 231
           P C  F T ++ V+F         Q R    +G+ H L P +  + C L+ D  P  +TN
Sbjct: 475 PMCDLFLTAIITVIFFTVFVQVLGQGRAGPCLGDPHRLFPWKERKACDLKCDSSPSSTTN 534


>AL137860-4|CAI22089.1|  555|Homo sapiens solute carrier family 9
           (sodium/hydrogen exchanger), member 1 (antiporter, Na+/
           protein.
          Length = 555

 Score = 32.3 bits (70), Expect = 4.9
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = +1

Query: 55  PGCRXFGTRLVAVLFEKPRXWCTNQHRVQG-VGEEHFLRPLRTSRVCSLRADGGPRLSTN 231
           P C  F T ++ V+F         Q R    +G+ H L P +  + C L+ D  P  +TN
Sbjct: 475 PMCDLFLTAIITVIFFTVFVQVLGQGRAGPCLGDPHRLFPWKERKACDLKCDSSPSSTTN 534


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,955,282
Number of Sequences: 237096
Number of extensions: 2753085
Number of successful extensions: 4239
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4239
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22965027146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)