Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_B08_e538_04.seq
         (1538 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81037-5|CAB02752.1|  320|Caenorhabditis elegans Hypothetical pr...    36   0.10 
Z81550-4|CAB04477.1|  317|Caenorhabditis elegans Hypothetical pr...    35   0.13 

>Z81037-5|CAB02752.1|  320|Caenorhabditis elegans Hypothetical
           protein C17E4.9 protein.
          Length = 320

 Score = 35.5 bits (78), Expect = 0.10
 Identities = 15/31 (48%), Positives = 23/31 (74%)
 Frame = +2

Query: 122 LINIECKAWAKNIFYDRYERRGSVHFELMVD 214
           L+ +EC+A+A NI +D   R G V+FE+MV+
Sbjct: 280 LVIVECRAYALNIEHDISSRLGMVYFEVMVE 310


>Z81550-4|CAB04477.1|  317|Caenorhabditis elegans Hypothetical
           protein F55F3.3 protein.
          Length = 317

 Score = 35.1 bits (77), Expect = 0.13
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = +2

Query: 122 LINIECKAWAKNIFYDRYERRGSVHFELMVD 214
           L+ +EC+A+A NI +D   R G V+FEL V+
Sbjct: 277 LVIVECRAYASNIEHDISTRLGMVYFELFVE 307


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,008,357
Number of Sequences: 27780
Number of extensions: 419030
Number of successful extensions: 870
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4431789446
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)