Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_B07_e530_03.seq
         (1516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   5.9  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   5.9  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
 Frame = +3

Query: 192 VTAIHLLIMFLTFDLAAWSTS----TFALKRNKWN 284
           +T I L++  L+ D+  W ++    T  LKR KWN
Sbjct: 130 LTDIKLVLNILS-DVTLWLSNVNSLTLTLKRKKWN 163


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
 Frame = +3

Query: 192 VTAIHLLIMFLTFDLAAWSTS----TFALKRNKWN 284
           +T I L++  L+ D+  W ++    T  LKR KWN
Sbjct: 56  LTDIKLVLNILS-DVTLWLSNVNSLTLTLKRKKWN 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,061
Number of Sequences: 336
Number of extensions: 4190
Number of successful extensions: 8
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 45476700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)