Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_B07_e530_03.seq
         (1516 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    26   3.3  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   4.3  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 25.8 bits (54), Expect = 3.3
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -1

Query: 436 NNNNKTLFHFDLKANTTSTRYITSRIVKHNYKYTQL 329
           +NN + L+H DL+  + + +Y  S  +KH Y    L
Sbjct: 541 DNNGRVLYHPDLRPLSDNDQY--SATLKHKYNSVDL 574


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
            transcription factor FRU-MA protein.
          Length = 960

 Score = 25.4 bits (53), Expect = 4.3
 Identities = 22/79 (27%), Positives = 23/79 (29%), Gaps = 2/79 (2%)
 Frame = -1

Query: 1363 GLGXFRXANXGGXAXXKIXXXXVXGXXG-PAPXGFF*GSVGXVXG-VRXXXXXFEXXXXX 1190
            GLG    A     A        + G  G P P G   GS   V   V             
Sbjct: 619  GLGCDSGAAAAAAAAAAAAAASILGFSGVPLPLG---GSSSLVESLVEHHRLAASLGGGA 675

Query: 1189 XGAXXGXGGGFWXXAGXGG 1133
             G   G GGG     G GG
Sbjct: 676  VGGGSGAGGGAGSSGGSGG 694


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,029,276
Number of Sequences: 2352
Number of extensions: 15913
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 177594615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)