Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_B06_e522_04.seq
(1497 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U85625-1|AAC51363.2| 256|Homo sapiens ribonuclease 6 precursor ... 47 2e-04
BC051912-1|AAH51912.1| 256|Homo sapiens ribonuclease T2 protein. 47 2e-04
BC039713-1|AAH39713.1| 256|Homo sapiens ribonuclease T2 protein. 47 2e-04
BC001819-1|AAH01819.1| 256|Homo sapiens ribonuclease T2 protein. 47 2e-04
BC001660-1|AAH01660.1| 256|Homo sapiens ribonuclease T2 protein. 47 2e-04
AL159163-1|CAI15001.1| 256|Homo sapiens RP11-514O12.3 protein. 47 2e-04
AL133458-3|CAI21600.1| 256|Homo sapiens RP11-514O12.3 protein. 47 2e-04
AL133458-2|CAI21598.1| 207|Homo sapiens RP11-514O12.3 protein. 47 2e-04
AJ419867-1|CAD12032.1| 240|Homo sapiens extra-cellular ribonucl... 47 2e-04
AJ419866-1|CAD12031.1| 121|Homo sapiens extra-cellular ribonucl... 47 2e-04
AJ419865-1|CAD12030.1| 256|Homo sapiens extra-cellular ribonucl... 47 2e-04
>U85625-1|AAC51363.2| 256|Homo sapiens ribonuclease 6 precursor
protein.
Length = 256
Score = 46.8 bits (106), Expect = 2e-04
Identities = 26/55 (47%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 213 RTRD-YDWDLLIFTQQWPPTVC-KIWKDNPSHMCNLPKNEDSWTXHGIWPTSLEG 371
R RD ++W LI Q WP TVC KI D C P D WT HG+WP EG
Sbjct: 27 RLRDNHEWKKLIMVQHWPETVCEKIQND-----CRDP--PDYWTIHGLWPDKSEG 74
Score = 31.5 bits (68), Expect = 8.2
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2
Query: 497 WAHXWPKHGTCAA 535
W H W KHGTCAA
Sbjct: 111 WKHEWEKHGTCAA 123
>BC051912-1|AAH51912.1| 256|Homo sapiens ribonuclease T2 protein.
Length = 256
Score = 46.8 bits (106), Expect = 2e-04
Identities = 26/55 (47%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 213 RTRD-YDWDLLIFTQQWPPTVC-KIWKDNPSHMCNLPKNEDSWTXHGIWPTSLEG 371
R RD ++W LI Q WP TVC KI D C P D WT HG+WP EG
Sbjct: 27 RLRDNHEWKKLIMVQHWPETVCEKIQND-----CRDP--PDYWTIHGLWPDKSEG 74
Score = 31.5 bits (68), Expect = 8.2
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2
Query: 497 WAHXWPKHGTCAA 535
W H W KHGTCAA
Sbjct: 111 WKHEWEKHGTCAA 123
>BC039713-1|AAH39713.1| 256|Homo sapiens ribonuclease T2 protein.
Length = 256
Score = 46.8 bits (106), Expect = 2e-04
Identities = 26/55 (47%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 213 RTRD-YDWDLLIFTQQWPPTVC-KIWKDNPSHMCNLPKNEDSWTXHGIWPTSLEG 371
R RD ++W LI Q WP TVC KI D C P D WT HG+WP EG
Sbjct: 27 RLRDNHEWKKLIMVQHWPETVCEKIQND-----CRDP--PDYWTIHGLWPDKSEG 74
Score = 31.5 bits (68), Expect = 8.2
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2
Query: 497 WAHXWPKHGTCAA 535
W H W KHGTCAA
Sbjct: 111 WKHEWEKHGTCAA 123
>BC001819-1|AAH01819.1| 256|Homo sapiens ribonuclease T2 protein.
Length = 256
Score = 46.8 bits (106), Expect = 2e-04
Identities = 26/55 (47%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 213 RTRD-YDWDLLIFTQQWPPTVC-KIWKDNPSHMCNLPKNEDSWTXHGIWPTSLEG 371
R RD ++W LI Q WP TVC KI D C P D WT HG+WP EG
Sbjct: 27 RLRDNHEWKKLIMVQHWPETVCEKIQND-----CRDP--PDYWTIHGLWPDKSEG 74
Score = 31.5 bits (68), Expect = 8.2
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2
Query: 497 WAHXWPKHGTCAA 535
W H W KHGTCAA
Sbjct: 111 WKHEWEKHGTCAA 123
>BC001660-1|AAH01660.1| 256|Homo sapiens ribonuclease T2 protein.
Length = 256
Score = 46.8 bits (106), Expect = 2e-04
Identities = 26/55 (47%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 213 RTRD-YDWDLLIFTQQWPPTVC-KIWKDNPSHMCNLPKNEDSWTXHGIWPTSLEG 371
R RD ++W LI Q WP TVC KI D C P D WT HG+WP EG
Sbjct: 27 RLRDNHEWKKLIMVQHWPETVCEKIQND-----CRDP--PDYWTIHGLWPDKSEG 74
Score = 31.5 bits (68), Expect = 8.2
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2
Query: 497 WAHXWPKHGTCAA 535
W H W KHGTCAA
Sbjct: 111 WKHEWEKHGTCAA 123
>AL159163-1|CAI15001.1| 256|Homo sapiens RP11-514O12.3 protein.
Length = 256
Score = 46.8 bits (106), Expect = 2e-04
Identities = 26/55 (47%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 213 RTRD-YDWDLLIFTQQWPPTVC-KIWKDNPSHMCNLPKNEDSWTXHGIWPTSLEG 371
R RD ++W LI Q WP TVC KI D C P D WT HG+WP EG
Sbjct: 27 RLRDNHEWKKLIMVQHWPETVCEKIQND-----CRDP--PDYWTIHGLWPDKSEG 74
Score = 31.5 bits (68), Expect = 8.2
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2
Query: 497 WAHXWPKHGTCAA 535
W H W KHGTCAA
Sbjct: 111 WKHEWEKHGTCAA 123
>AL133458-3|CAI21600.1| 256|Homo sapiens RP11-514O12.3 protein.
Length = 256
Score = 46.8 bits (106), Expect = 2e-04
Identities = 26/55 (47%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 213 RTRD-YDWDLLIFTQQWPPTVC-KIWKDNPSHMCNLPKNEDSWTXHGIWPTSLEG 371
R RD ++W LI Q WP TVC KI D C P D WT HG+WP EG
Sbjct: 27 RLRDNHEWKKLIMVQHWPETVCEKIQND-----CRDP--PDYWTIHGLWPDKSEG 74
Score = 31.5 bits (68), Expect = 8.2
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2
Query: 497 WAHXWPKHGTCAA 535
W H W KHGTCAA
Sbjct: 111 WKHEWEKHGTCAA 123
>AL133458-2|CAI21598.1| 207|Homo sapiens RP11-514O12.3 protein.
Length = 207
Score = 46.8 bits (106), Expect = 2e-04
Identities = 26/55 (47%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 213 RTRD-YDWDLLIFTQQWPPTVC-KIWKDNPSHMCNLPKNEDSWTXHGIWPTSLEG 371
R RD ++W LI Q WP TVC KI D C P D WT HG+WP EG
Sbjct: 27 RLRDNHEWKKLIMVQHWPETVCEKIQND-----CRDP--PDYWTIHGLWPDKSEG 74
>AJ419867-1|CAD12032.1| 240|Homo sapiens extra-cellular
ribonuclease protein.
Length = 240
Score = 46.8 bits (106), Expect = 2e-04
Identities = 26/55 (47%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 213 RTRD-YDWDLLIFTQQWPPTVC-KIWKDNPSHMCNLPKNEDSWTXHGIWPTSLEG 371
R RD ++W LI Q WP TVC KI D C P D WT HG+WP EG
Sbjct: 27 RLRDNHEWKKLIMVQHWPETVCEKIQND-----CRDP--PDYWTIHGLWPDKSEG 74
>AJ419866-1|CAD12031.1| 121|Homo sapiens extra-cellular
ribonuclease protein.
Length = 121
Score = 46.8 bits (106), Expect = 2e-04
Identities = 26/55 (47%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 213 RTRD-YDWDLLIFTQQWPPTVC-KIWKDNPSHMCNLPKNEDSWTXHGIWPTSLEG 371
R RD ++W LI Q WP TVC KI D C P D WT HG+WP EG
Sbjct: 27 RLRDNHEWKKLIMVQHWPETVCEKIQND-----CRDP--PDYWTIHGLWPDKSEG 74
>AJ419865-1|CAD12030.1| 256|Homo sapiens extra-cellular
ribonuclease protein.
Length = 256
Score = 46.8 bits (106), Expect = 2e-04
Identities = 26/55 (47%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 213 RTRD-YDWDLLIFTQQWPPTVC-KIWKDNPSHMCNLPKNEDSWTXHGIWPTSLEG 371
R RD ++W LI Q WP TVC KI D C P D WT HG+WP EG
Sbjct: 27 RLRDNHEWKKLIMVQHWPETVCEKIQND-----CRDP--PDYWTIHGLWPDKSEG 74
Score = 31.5 bits (68), Expect = 8.2
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2
Query: 497 WAHXWPKHGTCAA 535
W H W KHGTCAA
Sbjct: 111 WKHEWEKHGTCAA 123
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,525,188
Number of Sequences: 237096
Number of extensions: 1610166
Number of successful extensions: 6296
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6285
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22197699270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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