Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_B05_e514_03.seq
         (1548 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y18265-1|CAB41400.1| 1324|Homo sapiens zinc finger protein SALL1...    38   0.13 
Y18264-1|CAB41399.1| 1324|Homo sapiens zinc finger protein SALL1...    38   0.13 
AJ007421-1|CAB65124.1| 1272|Homo sapiens spalt-like zinc finger ...    33   2.8  
AF347021-1|AAK18311.1| 1300|Homo sapiens C2H2 zinc finger protei...    33   2.8  

>Y18265-1|CAB41400.1| 1324|Homo sapiens zinc finger protein SALL1
            protein.
          Length = 1324

 Score = 37.5 bits (83), Expect = 0.13
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +3

Query: 3    PFXCXNXXRGX*FYPGNMKQHMLTHXIRDMP 95
            PF C    RG     GN+KQHMLTH +RD+P
Sbjct: 1028 PFICTVCNRGF-STKGNLKQHMLTHQMRDLP 1057


>Y18264-1|CAB41399.1| 1324|Homo sapiens zinc finger protein SALL1
            protein.
          Length = 1324

 Score = 37.5 bits (83), Expect = 0.13
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +3

Query: 3    PFXCXNXXRGX*FYPGNMKQHMLTHXIRDMP 95
            PF C    RG     GN+KQHMLTH +RD+P
Sbjct: 1028 PFICTVCNRGF-STKGNLKQHMLTHQMRDLP 1057


>AJ007421-1|CAB65124.1| 1272|Homo sapiens spalt-like zinc finger
            protein protein.
          Length = 1272

 Score = 33.1 bits (72), Expect = 2.8
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +3

Query: 3    PFXCXNXXRGX*FYPGNMKQHMLTHXIRDMP 95
            PF C    RG     GN+KQH+LTH ++++P
Sbjct: 976  PFVCALCRRGC-STMGNLKQHLLTHRLKELP 1005


>AF347021-1|AAK18311.1| 1300|Homo sapiens C2H2 zinc finger protein
            protein.
          Length = 1300

 Score = 33.1 bits (72), Expect = 2.8
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +3

Query: 3    PFXCXNXXRGX*FYPGNMKQHMLTHXIRDMP 95
            PF C    RG     GN+KQH+LTH ++++P
Sbjct: 1004 PFVCALCRRGC-STMGNLKQHLLTHRLKELP 1033


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,822,300
Number of Sequences: 237096
Number of extensions: 544397
Number of successful extensions: 961
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 961
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 23129454548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)