Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_B05_e514_03.seq
         (1548 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X75541-1|CAA53229.1| 1355|Drosophila melanogaster spalt protein ...    37   0.065
AY118906-1|AAM50766.1|  495|Drosophila melanogaster LD17463p pro...    37   0.065
AE014134-2066|AAF53097.3| 1365|Drosophila melanogaster CG6464-PA...    37   0.065

>X75541-1|CAA53229.1| 1355|Drosophila melanogaster spalt protein
            protein.
          Length = 1355

 Score = 37.1 bits (82), Expect = 0.065
 Identities = 18/30 (60%), Positives = 19/30 (63%)
 Frame = +3

Query: 3    PFXCXNXXRGX*FYPGNMKQHMLTHXIRDM 92
            PF C    RG     GN+KQHMLTH IRDM
Sbjct: 1316 PFKCSICDRGF-TTKGNLKQHMLTHKIRDM 1344


>AY118906-1|AAM50766.1|  495|Drosophila melanogaster LD17463p
           protein.
          Length = 495

 Score = 37.1 bits (82), Expect = 0.065
 Identities = 18/30 (60%), Positives = 19/30 (63%)
 Frame = +3

Query: 3   PFXCXNXXRGX*FYPGNMKQHMLTHXIRDM 92
           PF C    RG     GN+KQHMLTH IRDM
Sbjct: 446 PFKCSICDRGF-TTKGNLKQHMLTHKIRDM 474


>AE014134-2066|AAF53097.3| 1365|Drosophila melanogaster CG6464-PA
            protein.
          Length = 1365

 Score = 37.1 bits (82), Expect = 0.065
 Identities = 18/30 (60%), Positives = 19/30 (63%)
 Frame = +3

Query: 3    PFXCXNXXRGX*FYPGNMKQHMLTHXIRDM 92
            PF C    RG     GN+KQHMLTH IRDM
Sbjct: 1316 PFKCSICDRGF-TTKGNLKQHMLTHKIRDM 1344


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,411,488
Number of Sequences: 53049
Number of extensions: 154222
Number of successful extensions: 229
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 229
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8676663912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)