Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_B04_e506_04.seq
         (1545 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...   386   e-108
AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           27   1.9  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   4.4  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score =  386 bits (949), Expect = e-108
 Identities = 176/234 (75%), Positives = 198/234 (84%)
 Frame = +2

Query: 131 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 310
           MGFVKVVKNKQYFKRYQV+F+RRREGKTDYYARKRL+ QDKNKYNTPK+RLIVRLSN+D+
Sbjct: 1   MGFVKVVKNKQYFKRYQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKFRLIVRLSNRDI 60

Query: 311 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 490
           TCQ+AY RIEGD IVCAAYSHELPRYG+KVGLTNYAAAYCTG             D+LY 
Sbjct: 61  TCQIAYRRIEGDRIVCAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYA 120

Query: 491 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 670
           G T+VTG+EY VEPVD GP AFRCYLDVGLARTTTG+RVFGAMKGAVDGGLN+PHS+KRF
Sbjct: 121 GCTDVTGEEYLVEPVDEGPAAFRCYLDVGLARTTTGSRVFGAMKGAVDGGLNIPHSVKRF 180

Query: 671 PGYDAESKKFNAEVHRAHIFGLHVGRVHA*PLXQEDEDSFKRQFWKXIXIRCKS 832
           PGY AE+K FNAE+HR HIFGLHV   +   L +EDE++FKRQF K I +  K+
Sbjct: 181 PGYSAENKSFNAEMHRDHIFGLHVAN-YMRTLEEEDEEAFKRQFSKYISLGIKA 233


>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 26.6 bits (56), Expect = 1.9
 Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
 Frame = -1

Query: 666 LLIECGTFKPPSTAPFMAPNTRAPVVVRAKPTSK*HLN-------APGPLSTGSTLYSSP 508
           L +  G   PP+T    A  T AP      PT+   +        APG  +T +T+ S P
Sbjct: 15  LAVTSGQIDPPTTTVAPATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTT-TTVASGP 73

Query: 507 VTSVAPV*RLSKPSLCNNLLASNRPV 430
           VT+       +  S   ++ A+  PV
Sbjct: 74  VTTTGSTDTTTPSSAPQDVKAALVPV 99


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 25.4 bits (53), Expect = 4.4
 Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = +2

Query: 491  GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMK--GAVDGGLNVP 652
            G T+ +GD+  ++  DNG G      +       TG+   G+    G++ GG   P
Sbjct: 2011 GGTDASGDDLEIDACDNGCGGGNGNENDDSGDGATGSGDNGSQHGGGSISGGGGTP 2066


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,239,774
Number of Sequences: 2352
Number of extensions: 23126
Number of successful extensions: 78
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 77
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 181658565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)