Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_B04_e506_04.seq
(1545 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 360 9e-99
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 357 5e-98
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 357 5e-98
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 357 5e-98
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 357 5e-98
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 357 5e-98
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 355 2e-97
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 194 7e-49
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 191 5e-48
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 105 3e-22
BC033492-1|AAH33492.2| 753|Homo sapiens SRY (sex determining re... 32 4.9
AB022083-1|BAA37146.1| 753|Homo sapiens SOX30 protein protein. 32 4.9
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 360 bits (885), Expect = 9e-99
Identities = 163/232 (70%), Positives = 192/232 (82%)
Frame = +2
Query: 119 IF*KMGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLS 298
+F +MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++
Sbjct: 4 LFRRMGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVT 63
Query: 299 NKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXD 478
N+D+ CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG D
Sbjct: 64 NRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMD 123
Query: 479 SLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 658
+Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS
Sbjct: 124 KIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHS 183
Query: 659 IKRFPGYDAESKKFNAEVHRAHIFGLHVGRVHA*PLXQEDEDSFKRQFWKXI 814
KRFPGYD+ESK+FNAEVHR HI G +V + L +EDED++K+QF + I
Sbjct: 184 TKRFPGYDSESKEFNAEVHRKHIMGQNVAD-YMRYLMEEDEDAYKKQFSQYI 234
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 357 bits (879), Expect = 5e-98
Identities = 162/228 (71%), Positives = 189/228 (82%)
Frame = +2
Query: 131 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 310
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 311 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 490
CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG D +Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 491 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 670
G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 671 PGYDAESKKFNAEVHRAHIFGLHVGRVHA*PLXQEDEDSFKRQFWKXI 814
PGYD+ESK+FNAEVHR HI G +V + L +EDED++K+QF + I
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVAD-YMRYLMEEDEDAYKKQFSQYI 227
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 357 bits (879), Expect = 5e-98
Identities = 162/228 (71%), Positives = 189/228 (82%)
Frame = +2
Query: 131 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 310
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 311 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 490
CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG D +Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 491 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 670
G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 671 PGYDAESKKFNAEVHRAHIFGLHVGRVHA*PLXQEDEDSFKRQFWKXI 814
PGYD+ESK+FNAEVHR HI G +V + L +EDED++K+QF + I
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVAD-YMRYLMEEDEDAYKKQFSQYI 227
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 357 bits (879), Expect = 5e-98
Identities = 162/228 (71%), Positives = 189/228 (82%)
Frame = +2
Query: 131 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 310
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 311 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 490
CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG D +Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 491 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 670
G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 671 PGYDAESKKFNAEVHRAHIFGLHVGRVHA*PLXQEDEDSFKRQFWKXI 814
PGYD+ESK+FNAEVHR HI G +V + L +EDED++K+QF + I
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVAD-YMRCLMEEDEDAYKKQFSQYI 227
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 357 bits (879), Expect = 5e-98
Identities = 162/228 (71%), Positives = 189/228 (82%)
Frame = +2
Query: 131 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 310
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 311 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 490
CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG D +Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 491 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 670
G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 671 PGYDAESKKFNAEVHRAHIFGLHVGRVHA*PLXQEDEDSFKRQFWKXI 814
PGYD+ESK+FNAEVHR HI G +V + L +EDED++K+QF + I
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVAD-YMRYLMEEDEDAYKKQFSQYI 227
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 357 bits (879), Expect = 5e-98
Identities = 162/228 (71%), Positives = 189/228 (82%)
Frame = +2
Query: 131 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 310
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 311 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 490
CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG D +Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 491 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 670
G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 671 PGYDAESKKFNAEVHRAHIFGLHVGRVHA*PLXQEDEDSFKRQFWKXI 814
PGYD+ESK+FNAEVHR HI G +V + L +EDED++K+QF + I
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVAD-YMRYLMEEDEDAYKKQFSQYI 227
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 355 bits (874), Expect = 2e-97
Identities = 161/228 (70%), Positives = 188/228 (82%)
Frame = +2
Query: 131 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 310
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 311 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 490
CQ+AY+RIEGD IVCA Y+HELP+YG+KVGLTNYAAAYCTG D +Y
Sbjct: 61 ICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 491 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 670
G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 671 PGYDAESKKFNAEVHRAHIFGLHVGRVHA*PLXQEDEDSFKRQFWKXI 814
PGYD+ESK+FNAEVHR HI G +V + L +EDED++K+QF + I
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVAD-YMRYLMEEDEDAYKKQFSQYI 227
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 194 bits (473), Expect = 7e-49
Identities = 84/125 (67%), Positives = 100/125 (80%)
Frame = +2
Query: 281 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXX 460
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 461 XXXXXDSLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGG 640
D +Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 641 LNVPH 655
L++PH
Sbjct: 121 LSIPH 125
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 191 bits (466), Expect = 5e-48
Identities = 83/98 (84%), Positives = 95/98 (96%)
Frame = +2
Query: 131 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 310
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 311 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAA 424
CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAA
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAA 98
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 105 bits (253), Expect = 3e-22
Identities = 49/76 (64%), Positives = 62/76 (81%)
Frame = +2
Query: 587 TTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVGRVHA*PL 766
TTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +V + L
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVAD-YMRYL 59
Query: 767 XQEDEDSFKRQFWKXI 814
+EDED++K+QF + I
Sbjct: 60 MEEDEDAYKKQFSQYI 75
>BC033492-1|AAH33492.2| 753|Homo sapiens SRY (sex determining
region Y)-box 30 protein.
Length = 753
Score = 32.3 bits (70), Expect = 4.9
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = -1
Query: 699 NFLDSASYPGNLLIECGTFKPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTL 520
N + S++ + T +PP ++P R+ + +A P H+ P PL +TL
Sbjct: 544 NRISSSASTAHARFATSTIQPPREYSSVSPCPRSAPIPQASPIPHPHVYQPPPLGHPATL 603
Query: 519 YSSP 508
+ +P
Sbjct: 604 FGTP 607
>AB022083-1|BAA37146.1| 753|Homo sapiens SOX30 protein protein.
Length = 753
Score = 32.3 bits (70), Expect = 4.9
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = -1
Query: 699 NFLDSASYPGNLLIECGTFKPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTL 520
N + S++ + T +PP ++P R+ + +A P H+ P PL +TL
Sbjct: 544 NRISSSASTAHARFATSTIQPPREYSSVSPCPRSAPIPQASPIPHPHVYQPPPLGHPATL 603
Query: 519 YSSP 508
+ +P
Sbjct: 604 FGTP 607
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,384,463
Number of Sequences: 237096
Number of extensions: 3619251
Number of successful extensions: 19030
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19022
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 23074645414
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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