Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_B01_e482_03.seq
         (1436 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    24   2.4  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    23   4.2  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   5.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   5.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   5.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   5.6  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = +1

Query: 547 LNISKSTQ*FSYVLINNIIIRIKTPYNGTLVPFMYRIEFILISFYQFINLM 699
           L I   T   S+ L+N     I  P +G   P  Y  E   +SFY+  + +
Sbjct: 756 LMIGMPTYGRSFELVNKTQFDIGAPASGGGTPGKYTAEAGFMSFYEICDFL 806


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 905 IVITGTQCPXSLPGFPMDVXLTDVKFEXF 991
           + IT + CP +L   PMD  L  ++ E F
Sbjct: 161 LTITAS-CPMNLQYLPMDRQLCHIEIESF 188


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +3

Query: 684 IYKFNA-VNYLPFFCV*LIVFEFQYKNFD 767
           IY F A V  L FFC  L++F  Q  + D
Sbjct: 55  IYAFVAPVKCLAFFCTALVIFYCQEGSVD 83


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +3

Query: 684 IYKFNA-VNYLPFFCV*LIVFEFQYKNFD 767
           IY F A V  L FFC  L++F  Q  + D
Sbjct: 288 IYAFVAPVKCLAFFCTALVIFYCQEGSVD 316


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +3

Query: 684 IYKFNA-VNYLPFFCV*LIVFEFQYKNFD 767
           IY F A V  L FFC  L++F  Q  + D
Sbjct: 288 IYAFVAPVKCLAFFCTALVIFYCQEGSVD 316


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 413 ICXXXXXXXCDYCDAVN 463
           IC       CD CD+VN
Sbjct: 515 ICIRSHDKLCDVCDSVN 531


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,789
Number of Sequences: 336
Number of extensions: 4478
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 42813650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)