Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_B01_e482_03.seq
         (1436 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   7.1  
AY330178-1|AAQ16284.1|  176|Anopheles gambiae odorant-binding pr...    24   9.4  
AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    24   9.4  
AJ618921-1|CAF02000.1|  172|Anopheles gambiae putative odorant-b...    24   9.4  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 24.6 bits (51), Expect = 7.1
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -2

Query: 157  HQVDGEDQGAEGGVYEGGDFVRADNHLVPNXLQPG 53
            HQ D E +G EGG  E G+ V  +    PN  Q G
Sbjct: 1104 HQQD-ERRGVEGGDIERGESVYPELASSPNNRQGG 1137


>AY330178-1|AAQ16284.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP51 protein.
          Length = 176

 Score = 24.2 bits (50), Expect = 9.4
 Identities = 9/36 (25%), Positives = 16/36 (44%)
 Frame = +2

Query: 380 NKCYQYNICGLICXXXXXXXCDYCDAVNIKRFTINE 487
           N    Y +CGL C           D +N+++ + N+
Sbjct: 63  NSTLDYLVCGLDCTYREMGILTGVDDINVEQISTNQ 98


>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 24.2 bits (50), Expect = 9.4
 Identities = 9/36 (25%), Positives = 16/36 (44%)
 Frame = +2

Query: 380 NKCYQYNICGLICXXXXXXXCDYCDAVNIKRFTINE 487
           N    Y +CGL C           D +N+++ + N+
Sbjct: 65  NSTLDYLVCGLDCTYREMGILTGVDDINVEQISTNQ 100


>AJ618921-1|CAF02000.1|  172|Anopheles gambiae putative
           odorant-binding protein OBP5479 protein.
          Length = 172

 Score = 24.2 bits (50), Expect = 9.4
 Identities = 9/36 (25%), Positives = 16/36 (44%)
 Frame = +2

Query: 380 NKCYQYNICGLICXXXXXXXCDYCDAVNIKRFTINE 487
           N    Y +CGL C           D +N+++ + N+
Sbjct: 65  NSTLDYLVCGLDCTYREMGILTGVDDINVEQISTNQ 100


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 977,939
Number of Sequences: 2352
Number of extensions: 18224
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 167028345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)