Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030725E6_A12_e569_02.seq
         (1497 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation facto...    33   0.007
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    25   1.9  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    24   3.3  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   3.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   3.3  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    23   5.8  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    23   5.8  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           23   5.8  

>AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation factor
           1-alpha protein.
          Length = 56

 Score = 32.7 bits (71), Expect = 0.007
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = +3

Query: 930 LQDVYKXGGIGTVPRG 977
           LQDVYK GGIGTVP G
Sbjct: 1   LQDVYKIGGIGTVPVG 16



 Score = 31.9 bits (69), Expect = 0.013
 Identities = 15/21 (71%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = +2

Query: 971  PXGRVETGXLKPGL-VXFCPA 1030
            P GRVETG LKPG+ V F PA
Sbjct: 14   PVGRVETGVLKPGMVVVFAPA 34


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 439 CHHHRRSWTQRFHQEHDHWNVSS 507
           C  HR    + FH+EHD    SS
Sbjct: 251 CDDHRDRPPRHFHEEHDTRRASS 273


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
 Frame = +3

Query: 807 HGSRDGWL-SVKKERLKVNALLGA---LTPSFRLLAPLTRLFRLPLQDVYK 947
           H  R  W+ S  + ++   +LL +   L+P  R     TRLF   L D+YK
Sbjct: 238 HLERKAWVASFGRPKMTPQSLLPSQTGLSPYLRFGCLSTRLFYYQLTDLYK 288


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 329 PFPGLPSRTFRWY 291
           P  G PS +FRWY
Sbjct: 255 PAQGFPSPSFRWY 267


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 295 GTFVDTTAFVDQVTSCCG 242
           G  +DT+ FVD +  C G
Sbjct: 641 GNKIDTSLFVDHIRQCVG 658


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = -3

Query: 685 LKSRLTVWWLSGVHFVYSYNQLLDSECESEQS 590
           L ++ + +W +  +  Y  N  L S+C+  Q+
Sbjct: 3   LSAQFSDYWTNSFYQNYKTNPFLASDCDKNQN 34


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = -3

Query: 685 LKSRLTVWWLSGVHFVYSYNQLLDSECESEQS 590
           L ++ + +W +  +  Y  N  L S+C+  Q+
Sbjct: 3   LSAQFSDYWTNSFYQNYKTNPFLASDCDKNQN 34


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = -3

Query: 685 LKSRLTVWWLSGVHFVYSYNQLLDSECESEQS 590
           L ++ + +W +  +  Y  N  L S+C+  Q+
Sbjct: 3   LSAQFSDYWTNSFYQNYKTNPFLASDCDKNQN 34


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 301,127
Number of Sequences: 336
Number of extensions: 6082
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 44862150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)