Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_A12_e569_02.seq
(1497 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 466 e-131
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 466 e-131
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 247 e-109
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 308 9e-84
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 227 1e-59
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 227 1e-59
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 213 3e-55
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 140 2e-33
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 96 7e-20
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 96 7e-20
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 96 7e-20
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 95 9e-20
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 95 9e-20
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 59 7e-09
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 56 9e-08
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 55 1e-07
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 47 4e-05
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 43 5e-05
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 44 4e-04
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 43 5e-04
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 40 0.003
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 38 0.018
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 38 0.024
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 38 0.024
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 38 0.024
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 36 0.074
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 33 0.40
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 33 0.40
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.69
Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical pr... 30 4.9
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 4.9
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 6.5
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 6.5
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 466 bits (1150), Expect = e-131
Identities = 223/283 (78%), Positives = 240/283 (84%), Gaps = 1/283 (0%)
Frame = +2
Query: 182 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 361
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 362 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 541
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 542 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKK 721
GEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE+RF EI EVS +IKK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180
Query: 722 IGYNPAAVAFVPISGWHGDNMLEPSTKXPWFKGWLVERKKGKAEGKCLIGGLDAXLPPAR 901
IGYNP AV FVPISG++GDNMLE S+ PWFKGW VERK+G A GK L+ LD+ +PP R
Sbjct: 181 IGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQR 240
Query: 902 PTDKAXPSSPARRIQXRRYWNXTPXGRVETGXLKPGL-VXFCP 1027
PTD+ P + + P GRVETG +KPG+ V F P
Sbjct: 241 PTDRPL-RLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAP 282
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 466 bits (1150), Expect = e-131
Identities = 223/283 (78%), Positives = 240/283 (84%), Gaps = 1/283 (0%)
Frame = +2
Query: 182 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 361
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 362 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 541
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 542 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKK 721
GEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE+RF EI EVS +IKK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180
Query: 722 IGYNPAAVAFVPISGWHGDNMLEPSTKXPWFKGWLVERKKGKAEGKCLIGGLDAXLPPAR 901
IGYNP AV FVPISG++GDNMLE S+ PWFKGW VERK+G A GK L+ LD+ +PP R
Sbjct: 181 IGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQR 240
Query: 902 PTDKAXPSSPARRIQXRRYWNXTPXGRVETGXLKPGL-VXFCP 1027
PTD+ P + + P GRVETG +KPG+ V F P
Sbjct: 241 PTDRPL-RLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAP 282
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 247 bits (605), Expect(2) = e-109
Identities = 114/117 (97%), Positives = 116/117 (99%)
Frame = +2
Query: 182 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 361
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 362 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 532
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 167 bits (406), Expect(2) = e-109
Identities = 80/136 (58%), Positives = 96/136 (70%), Gaps = 1/136 (0%)
Frame = +2
Query: 623 LIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 802
L+V NKMDSTEPP+SE+RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 803 XPWFKGWLVERKKGKAEGKCLIGGLDAXLPPARPTDKAXPSSPARRIQXRRYWNXTPXGR 982
PWFKGW VERK+G A GK L+ LD+ +PP RPTD+ P + + P GR
Sbjct: 174 MPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPL-RLPLQDVYKIGGIGTVPVGR 232
Query: 983 VETGXLKPGL-VXFCP 1027
VETG +KPG+ V F P
Sbjct: 233 VETGIIKPGMVVTFAP 248
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 308 bits (755), Expect = 9e-84
Identities = 149/172 (86%), Positives = 155/172 (90%)
Frame = +2
Query: 182 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 361
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 362 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 541
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 542 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKK 697
GEFEAGISKNGQTREHALLA TLGVKQL V+ T P S R + I++
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQR 169
Score = 45.6 bits (103), Expect = 9e-05
Identities = 33/76 (43%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +3
Query: 687 KSRRKSLPTSRKLVTI-RLPSLSYPFLAGTEITCWSRPPXCHGSRDGWLSVKKERLKVNA 863
+S +S +SR+ TI RL LS TE TC P CHGSRDG L+ +KE L
Sbjct: 152 RSPTRSPDSSRRSDTIQRLFHLSQS-PDSTETTCLRSPRTCHGSRDGLLNARKETLPERP 210
Query: 864 LLGALTPSFRLLAPLT 911
LTPS A LT
Sbjct: 211 SSRLLTPSSHHNAQLT 226
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 227 bits (556), Expect = 1e-59
Identities = 114/241 (47%), Positives = 163/241 (67%), Gaps = 1/241 (0%)
Frame = +2
Query: 191 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 370
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 371 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 550
+ ERERG+T+DI FET + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 286
Query: 551 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYI-KKIG 727
E G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G
Sbjct: 287 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 344
Query: 728 YNPAAVAFVPISGWHGDNMLEPSTKXPWFKGWLVERKKGKAEGKCLIGGLDAXLPPARPT 907
++ FVP+SG+ G+N+++ + W+ +G CL+ +D+ + P P+
Sbjct: 345 FSKP--KFVPVSGFTGENLIK-RMELDWY------------DGPCLLELIDSFVAPQPPS 389
Query: 908 D 910
D
Sbjct: 390 D 390
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 227 bits (556), Expect = 1e-59
Identities = 114/241 (47%), Positives = 163/241 (67%), Gaps = 1/241 (0%)
Frame = +2
Query: 191 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 370
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 371 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 550
+ ERERG+T+DI FET + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 304
Query: 551 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYI-KKIG 727
E G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G
Sbjct: 305 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 362
Query: 728 YNPAAVAFVPISGWHGDNMLEPSTKXPWFKGWLVERKKGKAEGKCLIGGLDAXLPPARPT 907
++ FVP+SG+ G+N+++ + W+ +G CL+ +D+ + P P+
Sbjct: 363 FSKP--KFVPVSGFTGENLIK-RMELDWY------------DGPCLLELIDSFVAPQPPS 407
Query: 908 D 910
D
Sbjct: 408 D 408
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 213 bits (520), Expect = 3e-55
Identities = 98/215 (45%), Positives = 146/215 (67%), Gaps = 3/215 (1%)
Frame = +2
Query: 185 GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 364
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 365 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 544
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A G
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223
Query: 545 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKI 724
EFE G + GQTREH++L T GVK L++ VNKMD + E RF+EI+ +++ +++K+
Sbjct: 224 EFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKL 283
Query: 725 GYNPAA-VAFVPISGWHGDNMLEPST--KXPWFKG 820
G+NP + +VP SG G + + T + W+ G
Sbjct: 284 GFNPKTDITYVPCSGLTGAFIKDRPTGSEGNWYSG 318
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 140 bits (339), Expect = 2e-33
Identities = 64/67 (95%), Positives = 65/67 (97%)
Frame = +2
Query: 182 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 361
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 362 DKLKAER 382
DKLK +
Sbjct: 61 DKLKVTK 67
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 95.9 bits (228), Expect = 7e-20
Identities = 65/183 (35%), Positives = 96/183 (52%), Gaps = 2/183 (1%)
Frame = +2
Query: 188 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 367
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 368 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 547
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 149
Query: 548 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKK 721
QTREH LLA +GV ++V +NK+D E P +E+R E ++ ++ + +
Sbjct: 150 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 199
Query: 722 IGY 730
GY
Sbjct: 200 FGY 202
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 95.9 bits (228), Expect = 7e-20
Identities = 65/183 (35%), Positives = 96/183 (52%), Gaps = 2/183 (1%)
Frame = +2
Query: 188 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 367
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 368 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 547
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 548 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKK 721
QTREH LLA +GV ++V +NK+D E P +E+R E ++ ++ + +
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 200
Query: 722 IGY 730
GY
Sbjct: 201 FGY 203
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 95.9 bits (228), Expect = 7e-20
Identities = 65/183 (35%), Positives = 96/183 (52%), Gaps = 2/183 (1%)
Frame = +2
Query: 188 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 367
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 368 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 547
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 548 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKK 721
QTREH LLA +GV ++V +NK+D E P +E+R E ++ ++ + +
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 200
Query: 722 IGY 730
GY
Sbjct: 201 FGY 203
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 95.5 bits (227), Expect = 9e-20
Identities = 66/189 (34%), Positives = 98/189 (51%), Gaps = 2/189 (1%)
Frame = +2
Query: 194 KVHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 367
K+++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 368 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 547
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 548 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIG 727
E QT+EH +LA +GVK + + +NK D E E + ++ E + G
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHG 194
Query: 728 YNPAAVAFV 754
+N A +
Sbjct: 195 FNGDATPVI 203
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 95.5 bits (227), Expect = 9e-20
Identities = 66/189 (34%), Positives = 98/189 (51%), Gaps = 2/189 (1%)
Frame = +2
Query: 194 KVHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 367
K+++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 368 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 547
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 548 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIG 727
E QT+EH +LA +GVK + + +NK D E E + ++ E + G
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHG 194
Query: 728 YNPAAVAFV 754
+N A +
Sbjct: 195 FNGDATPVI 203
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 59.3 bits (137), Expect = 7e-09
Identities = 47/148 (31%), Positives = 67/148 (45%)
Frame = +2
Query: 206 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 385
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 386 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 565
RGIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG------- 138
Query: 566 KNGQTREHALLAFTLGVKQLIVGVNKMD 649
QT + LAF + Q+I +NK+D
Sbjct: 139 VQAQTIANFWLAFEKNI-QIIPVINKID 165
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 55.6 bits (128), Expect = 9e-08
Identities = 47/148 (31%), Positives = 65/148 (43%)
Frame = +2
Query: 206 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 385
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 386 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 565
RGITI A + + IID PGH DF + D AVL++ G G G+
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQ 150
Query: 566 KNGQTREHALLAFTLGVKQLIVGVNKMD 649
T L + + I VNKMD
Sbjct: 151 SQTFTVNRQLARYNV---PFICFVNKMD 175
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 55.2 bits (127), Expect = 1e-07
Identities = 39/113 (34%), Positives = 53/113 (46%)
Frame = +2
Query: 206 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 385
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 386 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 544
RGIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 46.8 bits (106), Expect = 4e-05
Identities = 49/198 (24%), Positives = 86/198 (43%), Gaps = 2/198 (1%)
Frame = +2
Query: 203 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 382
+N+ ++GHVDSGK+T T + + + F+ A R
Sbjct: 14 LNLGILGHVDSGKTTLTRRIA------ELGSTSAFDAHATSTTTDGI------------R 55
Query: 383 ERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 562
+ + + +G+ + +ID PGH I+ ++ ++ D A++I+ + AGI
Sbjct: 56 RNTLDLGFSTMTSLSGRR-LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGI 109
Query: 563 SKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGY--NP 736
QT EH LLA ++I+ +NK D E +S+ E K+V +K +G N
Sbjct: 110 QP--QTAEHLLLASKFCPNRVIIVLNKCDLAE----KSKISESAKKVRKGLKSMGVDENS 163
Query: 737 AAVAFVPISGWHGDNMLE 790
V G+ + ML+
Sbjct: 164 PIVEMSLADGYFKEEMLQ 181
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 42.7 bits (96), Expect(2) = 5e-05
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = +2
Query: 329 GKGSFKYAWVLDKLKAERERGITIDIALWKFETGK-YYVTIIDAPGHRDFIKNMITGTSQ 505
GK + A ++ A GIT I + E K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 506 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 649
AD VL+VAA G E QT + A V QL+V VNK+D
Sbjct: 228 ADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVNKID 267
Score = 23.0 bits (47), Expect(2) = 5e-05
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 209 IVVIGHVDSGKST 247
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 43.6 bits (98), Expect = 4e-04
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 13/126 (10%)
Frame = +2
Query: 206 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWV 358
N+ VI HVD GKST T L+ K G I K +F K+ QE + + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 359 LDKLKAERERG----ITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 526
L+K E +G T+++ K + + + +ID+PGH DF + D A+++
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVV 140
Query: 527 VAAGTG 544
V +G
Sbjct: 141 VDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 43.2 bits (97), Expect = 5e-04
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 13/126 (10%)
Frame = +2
Query: 206 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWV 358
N+ VI HVD GKST T L+ K G I K +F K+ QE + + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 359 LDKLKAERERG----ITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 526
L+K E +G T+++ K + + + +ID+PGH DF + D A+++
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVV 140
Query: 527 VAAGTG 544
V +G
Sbjct: 141 VDCVSG 146
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 40.3 bits (90), Expect = 0.003
Identities = 51/189 (26%), Positives = 76/189 (40%), Gaps = 11/189 (5%)
Frame = +2
Query: 176 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIEKFEKEAQEMGKGSFK 346
P K+ + + V+G+VD+GKST G L + G RT K E G+ S
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFESGRTSSV 191
Query: 347 YAWVL------DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTS-- 502
+L + + +D + K VT ID GH ++K I G +
Sbjct: 192 GNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFIDLAGHEKYLKTTIFGMTGH 250
Query: 503 QADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRF 682
D +L++ A G G T+EH LA +L V +V V K+D E
Sbjct: 251 MPDYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLV-VTKIDMCPANILEETM 302
Query: 683 EEIKKEVSS 709
+ I + V S
Sbjct: 303 KNITRLVRS 311
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 37.9 bits (84), Expect = 0.018
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +2
Query: 437 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 616
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 617 KQLIVGVNKMDSTEPPYSESRFEEI 691
L++ NK+D + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 37.5 bits (83), Expect = 0.024
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +2
Query: 188 KEKVHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 364
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 365 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 529
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 37.5 bits (83), Expect = 0.024
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +2
Query: 188 KEKVHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 364
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 365 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 529
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 37.5 bits (83), Expect = 0.024
Identities = 52/185 (28%), Positives = 79/185 (42%), Gaps = 8/185 (4%)
Frame = +2
Query: 197 VHINIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 370
+ + + V+G D GKST G L C G K I F + E+ G K + V + +
Sbjct: 167 IEVRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEVRTG--KTSSVCNDV 223
Query: 371 KAERERGITIDIALWKF----ETGKYYVTIIDAPGHRDFIKNMITGTS--QADCAVLIVA 532
RG ++ A E VT+ID G + K I G + A L+VA
Sbjct: 224 IGFDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHGLTGYTPHFACLVVA 283
Query: 533 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSY 712
A + GI+ TREH L L + ++ + KMD + ++I K+VS+
Sbjct: 284 A-----DRGIT--WATREHLGLIAALNIPMFVL-ITKMDLVD----RQGLKKIIKDVSNL 331
Query: 713 IKKIG 727
+ K G
Sbjct: 332 VAKAG 336
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 35.9 bits (79), Expect = 0.074
Identities = 50/190 (26%), Positives = 76/190 (40%), Gaps = 12/190 (6%)
Frame = +2
Query: 176 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIEKFEKEAQEMGKGSFK 346
P K+ + + V+G+VD+GKST G L + G RT K E G+ S
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFESGRTSSV 191
Query: 347 YAWVL------DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQ- 505
+L + + +D + K VT ID GH ++K I G +
Sbjct: 192 GNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFIDLAGHEIYLKTTIFGMHRP 250
Query: 506 --ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESR 679
+ +L++ A G G T+EH LA +L V +V V K+D E
Sbjct: 251 YARNYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLV-VTKIDMCPAYILEET 302
Query: 680 FEEIKKEVSS 709
+ I + V S
Sbjct: 303 MKNITRLVRS 312
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 33.5 bits (73), Expect = 0.40
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +2
Query: 206 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 385
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 386 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 544
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 33.5 bits (73), Expect = 0.40
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +2
Query: 206 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 385
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 386 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 544
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 32.7 bits (71), Expect = 0.69
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = -1
Query: 642 LFTPTISCLTPSVKASRACSRVCPFFEIPASNSPVPAATISTA 514
LF PT+SC+ AS S P PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical
protein ZK20.1 protein.
Length = 420
Score = 29.9 bits (64), Expect = 4.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 460 RSVDDGDIVFAGFELPESNIDGDTTLTLGL 371
R ++DGDIV + F+ P I D T++L L
Sbjct: 260 RFIEDGDIVSSFFDRPSIRIQSDNTVSLRL 289
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 4.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 446 IIDAPGHRDFIKNMITGTSQADCAVLIV 529
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 284 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 385
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 284 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 385
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,176,504
Number of Sequences: 27780
Number of extensions: 597982
Number of successful extensions: 1726
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1699
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4308364692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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