Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_A12_e569_02.seq
(1497 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 385 e-107
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 385 e-107
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 385 e-107
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 385 e-107
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 206 4e-53
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 198 8e-51
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 101 9e-22
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 98 1e-20
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 56 8e-08
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 56 8e-08
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 51 2e-06
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 50 3e-06
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 50 5e-06
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 45 1e-04
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 42 8e-04
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 42 8e-04
At5g13650.2 68418.m01585 elongation factor family protein contai... 41 0.002
At5g13650.1 68418.m01584 elongation factor family protein contai... 41 0.002
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 41 0.002
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 41 0.002
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 39 0.010
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 36 0.069
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 36 0.069
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.37
At3g01360.1 68416.m00057 expressed protein contains Pfam profile... 33 0.64
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 32 1.1
At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ... 31 2.0
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 3.4
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 30 3.4
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 4.5
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 4.5
At1g23200.1 68414.m02898 pectinesterase family protein contains ... 30 4.5
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 385 bits (947), Expect = e-107
Identities = 193/283 (68%), Positives = 216/283 (76%), Gaps = 1/283 (0%)
Frame = +2
Query: 182 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 361
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 362 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 541
DKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 542 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKK 721
G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS++R++EI KEVSSY+KK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180
Query: 722 IGYNPAAVAFVPISGWHGDNMLEPSTKXPWFKGWLVERKKGKAEGKCLIGGLDAXLPPAR 901
+GYNP + FVPISG+ GDNM+E ST W+K G L+ LD P R
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------GPTLLEALDQINEPKR 228
Query: 902 PTDKAXPSSPARRIQXRRYWNXTPXGRVETGXLKPGL-VXFCP 1027
P+DK P + + P GRVETG +KPG+ V F P
Sbjct: 229 PSDKPL-RLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAP 270
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 385 bits (947), Expect = e-107
Identities = 193/283 (68%), Positives = 216/283 (76%), Gaps = 1/283 (0%)
Frame = +2
Query: 182 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 361
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 362 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 541
DKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 542 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKK 721
G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS++R++EI KEVSSY+KK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180
Query: 722 IGYNPAAVAFVPISGWHGDNMLEPSTKXPWFKGWLVERKKGKAEGKCLIGGLDAXLPPAR 901
+GYNP + FVPISG+ GDNM+E ST W+K G L+ LD P R
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------GPTLLEALDQINEPKR 228
Query: 902 PTDKAXPSSPARRIQXRRYWNXTPXGRVETGXLKPGL-VXFCP 1027
P+DK P + + P GRVETG +KPG+ V F P
Sbjct: 229 PSDKPL-RLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAP 270
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 385 bits (947), Expect = e-107
Identities = 193/283 (68%), Positives = 216/283 (76%), Gaps = 1/283 (0%)
Frame = +2
Query: 182 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 361
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 362 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 541
DKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 542 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKK 721
G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS++R++EI KEVSSY+KK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180
Query: 722 IGYNPAAVAFVPISGWHGDNMLEPSTKXPWFKGWLVERKKGKAEGKCLIGGLDAXLPPAR 901
+GYNP + FVPISG+ GDNM+E ST W+K G L+ LD P R
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------GPTLLEALDQINEPKR 228
Query: 902 PTDKAXPSSPARRIQXRRYWNXTPXGRVETGXLKPGL-VXFCP 1027
P+DK P + + P GRVETG +KPG+ V F P
Sbjct: 229 PSDKPL-RLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAP 270
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 385 bits (947), Expect = e-107
Identities = 193/283 (68%), Positives = 216/283 (76%), Gaps = 1/283 (0%)
Frame = +2
Query: 182 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 361
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 362 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 541
DKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 542 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKK 721
G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS++R++EI KEVSSY+KK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180
Query: 722 IGYNPAAVAFVPISGWHGDNMLEPSTKXPWFKGWLVERKKGKAEGKCLIGGLDAXLPPAR 901
+GYNP + FVPISG+ GDNM+E ST W+K G L+ LD P R
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------GPTLLEALDQINEPKR 228
Query: 902 PTDKAXPSSPARRIQXRRYWNXTPXGRVETGXLKPGL-VXFCP 1027
P+DK P + + P GRVETG +KPG+ V F P
Sbjct: 229 PSDKPL-RLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAP 270
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 206 bits (502), Expect = 4e-53
Identities = 102/271 (37%), Positives = 161/271 (59%), Gaps = 2/271 (0%)
Frame = +2
Query: 203 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 382
+N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+ ER
Sbjct: 240 LNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAEER 299
Query: 383 ERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 562
ERGIT+ +A+ F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEAG
Sbjct: 300 ERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGF 359
Query: 563 SK-NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPA 739
GQTREHA + GV+Q+IV +NKMD YS+ RF+ IK+ V S+++ + +
Sbjct: 360 DNLKGQTREHARVLRGFGVEQVIVAINKMDIV--GYSKERFDLIKQHVGSFLQSCRFKDS 417
Query: 740 AVAFVPISGWHGDNML-EPSTKXPWFKGWLVERKKGKAEGKCLIGGLDAXLPPARPTDKA 916
++ ++P+S N++ PS W +G CL+ +D+ P R K
Sbjct: 418 SLTWIPLSAMENQNLVAAPSDNR--LSSWY--------QGPCLLDAVDSVKSPDRDVSKP 467
Query: 917 XPSSPARRIQXRRYWNXTPXGRVETGXLKPG 1009
++ + G++E G ++PG
Sbjct: 468 LLMPICDAVRSTSQGQVSACGKLEAGAVRPG 498
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 198 bits (483), Expect = 8e-51
Identities = 96/213 (45%), Positives = 142/213 (66%), Gaps = 3/213 (1%)
Frame = +2
Query: 191 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 370
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157
Query: 371 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 550
+ ER +G T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEF
Sbjct: 158 EEERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEF 217
Query: 551 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGY 730
E G + GQTREH LA TLGV +LIV VNKMD +S+ R++EI++++ ++K GY
Sbjct: 218 ETGYERGGQTREHVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLKASGY 277
Query: 731 NPAA-VAFVPISGWHGDNMLEPSTKX--PWFKG 820
N V F+PISG G NM + + PW+ G
Sbjct: 278 NTKKDVVFLPISGLMGKNMDQRMGQEICPWWSG 310
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 101 bits (243), Expect = 9e-22
Identities = 63/179 (35%), Positives = 93/179 (51%), Gaps = 1/179 (0%)
Frame = +2
Query: 179 KMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 358
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE--------------- 116
Query: 359 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 538
+D ER RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+
Sbjct: 117 IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 176
Query: 539 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFE-EIKKEVSSY 712
G QT+EH LLA +GV ++V +NK D + E E+++ +SSY
Sbjct: 177 DGPMP-------QTKEHILLAKQVGVPDMVVFLNKEDQVDDAELLELVELEVRELLSSY 228
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 98.3 bits (234), Expect = 1e-20
Identities = 66/198 (33%), Positives = 96/198 (48%)
Frame = +2
Query: 188 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 367
+ K H+N+ IGHVD GK+T T + K E GK +DK
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLTAAIT---------------KVLAEEGKAKAIAFDEIDK 107
Query: 368 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 547
E++RGITI A ++ET K + +D PGH D++KNMITG +Q D +L+V+ G
Sbjct: 108 APEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGP 167
Query: 548 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIG 727
QT+EH LLA +GV L+ +NK+D + P E +E+ S+ K G
Sbjct: 168 MP-------QTKEHILLARQVGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYKFPG 220
Query: 728 YNPAAVAFVPISGWHGDN 781
+ + +S G N
Sbjct: 221 DDIPIIRGSALSALQGTN 238
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 55.6 bits (128), Expect = 8e-08
Identities = 41/128 (32%), Positives = 61/128 (47%)
Frame = +2
Query: 206 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 385
NI + H+DSGK+T T +++ G I E E ++ G G+ +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 386 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 565
+GITI A Y V IID PGH DF + D A+L++ + G I+
Sbjct: 117 KGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSIT 176
Query: 566 KNGQTREH 589
+ Q R +
Sbjct: 177 VDRQMRRY 184
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 55.6 bits (128), Expect = 8e-08
Identities = 41/128 (32%), Positives = 61/128 (47%)
Frame = +2
Query: 206 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 385
NI + H+DSGK+T T +++ G I E E ++ G G+ +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 386 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 565
+GITI A Y V IID PGH DF + D A+L++ + G I+
Sbjct: 117 KGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSIT 176
Query: 566 KNGQTREH 589
+ Q R +
Sbjct: 177 VDRQMRRY 184
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 51.2 bits (117), Expect = 2e-06
Identities = 36/113 (31%), Positives = 53/113 (46%)
Frame = +2
Query: 206 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 385
NI ++ HVD GK+T HLI GG + GK F +D L E+
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG--------GVLHPRLAGKLRF-----MDYLDEEQR 57
Query: 386 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 544
R IT+ + + Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 58 RAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 50.4 bits (115), Expect = 3e-06
Identities = 36/117 (30%), Positives = 56/117 (47%)
Frame = +2
Query: 194 KVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 373
K + NI ++ H+D+GK+TTT ++Y G K E+ +G+ W ++
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTGRNYK---------IGEVHEGTATMDW----ME 140
Query: 374 AERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 544
E+ERGITI A K+ + IID PGH DF + D A+ + + G
Sbjct: 141 QEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAG 197
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 49.6 bits (113), Expect = 5e-06
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 6/168 (3%)
Frame = +2
Query: 206 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 385
N +I H+D GKST L+ G + R + K F LD + ERE
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDM-----------KEQF-----LDNMDLERE 131
Query: 386 RGITIDIAL----WKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 553
RGITI + + +E + + +ID PGH DF + + + A+L+V A G E
Sbjct: 132 RGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG-VE 190
Query: 554 AGISKNGQTREHALLAFTLGVKQLIVGVNKMD--STEPPYSESRFEEI 691
A QT + LA + ++I +NK+D EP EE+
Sbjct: 191 A------QTLANVYLALENNL-EIIPVLNKIDLPGAEPEKVLREIEEV 231
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 45.2 bits (102), Expect = 1e-04
Identities = 51/166 (30%), Positives = 69/166 (41%), Gaps = 9/166 (5%)
Frame = +2
Query: 179 KMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 358
K EK+ N +I H+D GKST L+ G I K G G +Y
Sbjct: 60 KFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK-------------GHGQPQY--- 102
Query: 359 LDKLKAERERGITIDIALWKF---------ETGKYYVTIIDAPGHRDFIKNMITGTSQAD 511
LDKL +RERGIT+ E Y + +ID PGH DF + S
Sbjct: 103 LDKL--QRERGITVKAQTATMFYENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLSACQ 160
Query: 512 CAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 649
A+L+V A G QT + LAF + ++ +NK+D
Sbjct: 161 GALLVVDAAQG-------VQAQTVANFYLAFEANL-TIVPVINKID 198
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 42.3 bits (95), Expect = 8e-04
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 14/192 (7%)
Frame = +2
Query: 176 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDK-RTIEKFEKEAQ-EMGKGSFK- 346
P++ + INI IGHV GKST ++ G+ R + E+ ++G + K
Sbjct: 31 PEVISRQATINIGTIGHVAHGKST----IVKAISGVQTVRFKNELERNITIKLGYANAKI 86
Query: 347 YAWVLDKLK---------AERERGITIDIALWKF--ETGKYYVTIIDAPGHRDFIKNMIT 493
Y DK + +E T D+ ++ T + +V+ +D PGH + M+
Sbjct: 87 YKCEDDKCPRPMCYKSYGSGKEDNPTCDVPGFENCKMTLRRHVSCVDCPGHDILMATMLN 146
Query: 494 GTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE 673
G + D A+L++AA QT EH + +K +I+ NK+D +
Sbjct: 147 GAAIVDGALLLIAANES------CPQPQTAEHLASVDMMRLKHIIILQNKIDLINEKAAT 200
Query: 674 SRFEEIKKEVSS 709
+ E I+K +++
Sbjct: 201 EQHEAIQKFITN 212
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 42.3 bits (95), Expect = 8e-04
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 14/192 (7%)
Frame = +2
Query: 176 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDK-RTIEKFEKEAQ-EMGKGSFK- 346
P++ + INI IGHV GKST ++ G+ R + E+ ++G + K
Sbjct: 31 PEVISRQATINIGTIGHVAHGKST----IVKAISGVQTVRFKNELERNITIKLGYANAKI 86
Query: 347 YAWVLDKLK---------AERERGITIDIALWKF--ETGKYYVTIIDAPGHRDFIKNMIT 493
Y DK + +E T D+ ++ T + +V+ +D PGH + M+
Sbjct: 87 YKCEDDKCPRPMCYKSYGSGKEDNPTCDVPGFENCKMTLRRHVSCVDCPGHDILMATMLN 146
Query: 494 GTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE 673
G + D A+L++AA QT EH + +K +I+ NK+D +
Sbjct: 147 GAAIVDGALLLIAANES------CPQPQTAEHLASVDMMRLKHIIILQNKIDLINEKAAT 200
Query: 674 SRFEEIKKEVSS 709
+ E I+K +++
Sbjct: 201 EQHEAIQKFITN 212
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 40.7 bits (91), Expect = 0.002
Identities = 48/163 (29%), Positives = 68/163 (41%), Gaps = 3/163 (1%)
Frame = +2
Query: 206 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 385
NI ++ HVD GK+T ++ + K ++ Q M + ++D ERE
Sbjct: 85 NIAIVAHVDHGKTTLVDSMLRQA---------KVFRDNQVMQER------IMDSNDLERE 129
Query: 386 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 565
RGITI V IID PGH DF + + D +L+V + G
Sbjct: 130 RGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMP---- 185
Query: 566 KNGQTREHALLAFTLGVKQLIVGVNKMD--STEPPY-SESRFE 685
QTR A G ++V VNK+D S P + S FE
Sbjct: 186 ---QTRFVLKKALEFG-HAVVVVVNKIDRPSARPEFVVNSTFE 224
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 40.7 bits (91), Expect = 0.002
Identities = 48/163 (29%), Positives = 68/163 (41%), Gaps = 3/163 (1%)
Frame = +2
Query: 206 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 385
NI ++ HVD GK+T ++ + K ++ Q M + ++D ERE
Sbjct: 84 NIAIVAHVDHGKTTLVDSMLRQA---------KVFRDNQVMQER------IMDSNDLERE 128
Query: 386 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 565
RGITI V IID PGH DF + + D +L+V + G
Sbjct: 129 RGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMP---- 184
Query: 566 KNGQTREHALLAFTLGVKQLIVGVNKMD--STEPPY-SESRFE 685
QTR A G ++V VNK+D S P + S FE
Sbjct: 185 ---QTRFVLKKALEFG-HAVVVVVNKIDRPSARPEFVVNSTFE 223
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 40.7 bits (91), Expect = 0.002
Identities = 24/91 (26%), Positives = 46/91 (50%)
Frame = +2
Query: 437 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 616
+V+ +D PGH + M+ G + D A+LI+AA QT EH + +
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173
Query: 617 KQLIVGVNKMDSTEPPYSESRFEEIKKEVSS 709
K +I+ NK+D + + + E+I++ +++
Sbjct: 174 KDIIIIQNKIDLIQENEAIKQHEDIQRFITN 204
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 40.7 bits (91), Expect = 0.002
Identities = 24/93 (25%), Positives = 46/93 (49%)
Frame = +2
Query: 437 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 616
+V+ +D PGH + M+ G + D A+L++AA QT EH + +
Sbjct: 122 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSEHLAAVEIMQL 175
Query: 617 KQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYI 715
K +I+ NK+D + + ++ E I+K + + +
Sbjct: 176 KHIIILQNKIDLIQENVAINQHEAIQKFIMNTV 208
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 38.7 bits (86), Expect = 0.010
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = +2
Query: 206 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKYAWVLDKLK 373
N+ VI HVD GKST T L+ G I + + + A E +G + K + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYE 80
Query: 374 AERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 529
E ++ + +Y + +ID+PGH DF + D A+++V
Sbjct: 81 MTDE---SLKSFTGARDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.9 bits (79), Expect = 0.069
Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Frame = +2
Query: 206 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 385
N+ ++GH+ GK+ L+ + + K EK KY D E+E
Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQTHHMSTFNA-KNEKH--------MKYT---DTRVDEQE 187
Query: 386 RGITI-----DIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 544
R I+I + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 188 RNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.9 bits (79), Expect = 0.069
Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Frame = +2
Query: 206 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 385
N+ ++GH+ GK+ L+ + + K EK KY D E+E
Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQTHHMSTFNA-KNEKH--------MKYT---DTRVDEQE 187
Query: 386 RGITI-----DIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 544
R I+I + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 188 RNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 33.5 bits (73), Expect = 0.37
Identities = 28/102 (27%), Positives = 45/102 (44%)
Frame = +2
Query: 440 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 619
+T +D PGH F + G + D VL+VAA G QT E A + V
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDGVMP-------QTLEAIAHARSANV- 321
Query: 620 QLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAV 745
++V +NK D + +++ + + ++ IG N AV
Sbjct: 322 PVVVAINKCDKPGANPEKVKYQLTSEGIE--LEDIGGNVQAV 361
>At3g01360.1 68416.m00057 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 319
Score = 32.7 bits (71), Expect = 0.64
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +2
Query: 449 IDAPGHRDFIKNMITGTSQADCAV-LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 625
I GH D+ + T Q +C + L+V TG F +KNG R+ LG +
Sbjct: 226 IKCKGHGDYHRAKAIATLQFNCHLALMVVVATGLFSVIANKNGYLRQDHSKYRPLGAELE 285
Query: 626 IVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYN 733
+ +DS E +E+++E S+ K++G N
Sbjct: 286 NLSTFTLDSDEE-------DEVREE-SNVAKEVGLN 313
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 31.9 bits (69), Expect = 1.1
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 4/99 (4%)
Frame = +2
Query: 365 KLKAERERGITIDIALWKFET---GKYYVTI-IDAPGHRDFIKNMITGTSQADCAVLIVA 532
K+ A GIT I +K GK + +D PGH F G D A+++VA
Sbjct: 525 KVAASEAGGITQGIGAYKVSVPVDGKLQSCVFLDTPGHEAFGAMRARGARVTDIAIIVVA 584
Query: 533 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 649
A G QT E A+ +++ +NK+D
Sbjct: 585 ADDG-------IRPQTNE-AIAHAKAAAVPIVIAINKID 615
>At5g46180.1 68418.m05680 ornithine aminotransferase, putative /
ornithine--oxo-acid aminotransferase, putative similar
to SP|Q92413 Ornithine aminotransferase (EC 2.6.1.13)
(Ornithine--oxo-acid aminotransferase) [Aspergillus
nidulans] {Emericella nidulans}; contains Pfam profile
PF00202: aminotransferase, class III
Length = 475
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 605 TLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 766
T GV++ G+ + +S PP S R E++ E S++ Y+P V F +G
Sbjct: 18 TAGVRRSYGGLPQSNSKSPPSSSQRLMELESEFSAH----NYHPVPVVFSRANG 67
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 30.3 bits (65), Expect = 3.4
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +2
Query: 446 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 625
+ID PGH F G+S D A+L+V + + G+ QT E +L + +
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIKHGLEP--QTIE-SLNLLRMRNTEF 756
Query: 626 IVGVNKMD 649
I+ +NK+D
Sbjct: 757 IIALNKVD 764
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 30.3 bits (65), Expect = 3.4
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +2
Query: 440 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 619
+ +ID PGH F G++ D A+L+V + G+ QT E L VK
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV-----DIMRGLEP--QTIESLNLLRRRNVK 610
Query: 620 QLIVGVNKMD 649
I+ +NK+D
Sbjct: 611 -FIIALNKVD 619
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 4.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 446 IIDAPGHRDFIKNMITGTSQADCAVLIV 529
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 4.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 446 IIDAPGHRDFIKNMITGTSQADCAVLIV 529
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g23200.1 68414.m02898 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 554
Score = 29.9 bits (64), Expect = 4.5
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3
Query: 556 GFEFTSTSGDNKHGAVSLRRSSD 488
G F +T+G KH AV+LR SSD
Sbjct: 344 GITFENTAGPEKHQAVALRSSSD 366
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,874,794
Number of Sequences: 28952
Number of extensions: 554639
Number of successful extensions: 1644
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1617
length of database: 12,070,560
effective HSP length: 84
effective length of database: 9,638,592
effective search space used: 3990377088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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