Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_A11_e561_01.seq
(1470 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00036-6|AAK29853.1| 377|Caenorhabditis elegans Hypothetical pr... 106 3e-23
U00036-5|AAT92064.1| 446|Caenorhabditis elegans Hypothetical pr... 106 3e-23
U00036-7|AAK29858.2| 319|Caenorhabditis elegans Hypothetical pr... 104 1e-22
U00036-8|AAL06052.1| 318|Caenorhabditis elegans Hypothetical pr... 94 3e-19
Z68014-5|CAA92027.1| 353|Caenorhabditis elegans Hypothetical pr... 62 7e-10
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.22
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.22
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.22
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 33 0.68
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 1.6
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 1.6
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.6
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 31 2.7
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 30 4.8
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 30 4.8
U11279-3|AAF99909.1| 423|Caenorhabditis elegans T box family pr... 29 6.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 8.3
>U00036-6|AAK29853.1| 377|Caenorhabditis elegans Hypothetical
protein R151.2a protein.
Length = 377
Score = 106 bits (255), Expect = 3e-23
Identities = 52/77 (67%), Positives = 61/77 (79%)
Frame = +3
Query: 354 RMPNIKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSG 533
RMPNIKVFSGSSHPDL+ +I +RL +++ K KKFSN ET VEIGESVRGEDVYI+QS
Sbjct: 58 RMPNIKVFSGSSHPDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSA 117
Query: 534 SGEINDX**NYLFMIHA 584
+GEIND L MI+A
Sbjct: 118 AGEINDNLMELLIMINA 134
>U00036-5|AAT92064.1| 446|Caenorhabditis elegans Hypothetical
protein R151.2d protein.
Length = 446
Score = 106 bits (255), Expect = 3e-23
Identities = 52/77 (67%), Positives = 61/77 (79%)
Frame = +3
Query: 354 RMPNIKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSG 533
RMPNIKVFSGSSHPDL+ +I +RL +++ K KKFSN ET VEIGESVRGEDVYI+QS
Sbjct: 127 RMPNIKVFSGSSHPDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSA 186
Query: 534 SGEINDX**NYLFMIHA 584
+GEIND L MI+A
Sbjct: 187 AGEINDNLMELLIMINA 203
>U00036-7|AAK29858.2| 319|Caenorhabditis elegans Hypothetical
protein R151.2b protein.
Length = 319
Score = 104 bits (250), Expect = 1e-22
Identities = 51/76 (67%), Positives = 60/76 (78%)
Frame = +3
Query: 357 MPNIKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSGS 536
MPNIKVFSGSSHPDL+ +I +RL +++ K KKFSN ET VEIGESVRGEDVYI+QS +
Sbjct: 1 MPNIKVFSGSSHPDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSAA 60
Query: 537 GEINDX**NYLFMIHA 584
GEIND L MI+A
Sbjct: 61 GEINDNLMELLIMINA 76
>U00036-8|AAL06052.1| 318|Caenorhabditis elegans Hypothetical
protein R151.2c protein.
Length = 318
Score = 93.9 bits (223), Expect = 3e-19
Identities = 46/71 (64%), Positives = 55/71 (77%)
Frame = +3
Query: 372 VFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSGSGEIND 551
VFSGSSHPDL+ +I +RL +++ K KKFSN ET VEIGESVRGEDVYI+QS +GEIND
Sbjct: 5 VFSGSSHPDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSAAGEIND 64
Query: 552 X**NYLFMIHA 584
L MI+A
Sbjct: 65 NLMELLIMINA 75
>Z68014-5|CAA92027.1| 353|Caenorhabditis elegans Hypothetical
protein W04G3.5 protein.
Length = 353
Score = 62.5 bits (145), Expect = 7e-10
Identities = 30/76 (39%), Positives = 50/76 (65%)
Frame = +3
Query: 372 VFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSGSGEIND 551
+ +G+SHP+LA+ + +RL I LG+ +N ET V+I +SVRG+ V+I+QSGS +N+
Sbjct: 13 LLTGNSHPELAKMVSERLEIRLGEATVYNKTNRETSVDIKQSVRGKHVFILQSGSKNVNN 72
Query: 552 X**NYLFMIHALENXV 599
L +I+A + +
Sbjct: 73 DVMELLVLIYACKTSM 88
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 34.3 bits (75), Expect = 0.22
Identities = 26/100 (26%), Positives = 32/100 (32%)
Frame = -1
Query: 1371 PPGGXXXGPPXPXSPPNKXFFXLXXSRXQKKXPPGXXGGGPXXXXPPRXXXNFFXXXKKK 1192
P G G P SPP SR +++ P G P PP + K +
Sbjct: 417 PTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSE 476
Query: 1191 XXFXRXGPPCXXXKKXXGGGGXXXPPPXXXPQXGGPPRGG 1072
R GP G PP P G PP+ G
Sbjct: 477 SSESREGPRGPRRSPPTGS------PPTGSPPTGAPPKKG 510
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 34.3 bits (75), Expect = 0.22
Identities = 26/100 (26%), Positives = 32/100 (32%)
Frame = -1
Query: 1371 PPGGXXXGPPXPXSPPNKXFFXLXXSRXQKKXPPGXXGGGPXXXXPPRXXXNFFXXXKKK 1192
P G G P SPP SR +++ P G P PP + K +
Sbjct: 438 PTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSE 497
Query: 1191 XXFXRXGPPCXXXKKXXGGGGXXXPPPXXXPQXGGPPRGG 1072
R GP G PP P G PP+ G
Sbjct: 498 SSESREGPRGPRRSPPTGS------PPTGSPPTGAPPKKG 531
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 34.3 bits (75), Expect = 0.22
Identities = 26/100 (26%), Positives = 32/100 (32%)
Frame = -1
Query: 1371 PPGGXXXGPPXPXSPPNKXFFXLXXSRXQKKXPPGXXGGGPXXXXPPRXXXNFFXXXKKK 1192
P G G P SPP SR +++ P G P PP + K +
Sbjct: 423 PTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSE 482
Query: 1191 XXFXRXGPPCXXXKKXXGGGGXXXPPPXXXPQXGGPPRGG 1072
R GP G PP P G PP+ G
Sbjct: 483 SSESREGPRGPRRSPPTGS------PPTGSPPTGAPPKKG 516
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 32.7 bits (71), Expect = 0.68
Identities = 28/126 (22%), Positives = 35/126 (27%), Gaps = 6/126 (4%)
Frame = -1
Query: 1440 PXPPPXXKKKXXKX-GXGGXKKKXPPGGXXXGPPXPXSPPNKXFFXLXXSRXQKKXPPGX 1264
P PPP + + G + PP G PP P P SR P G
Sbjct: 168 PPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKGT 227
Query: 1263 XGGGPXXXXPPRXXXNFFXXXKK-----KXXFXRXGPPCXXXKKXXGGGGXXXPPPXXXP 1099
P P+ ++ K PP + G G PP
Sbjct: 228 GSPTPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPK 287
Query: 1098 QXGGPP 1081
G PP
Sbjct: 288 GTGTPP 293
Score = 32.3 bits (70), Expect = 0.90
Identities = 28/126 (22%), Positives = 35/126 (27%), Gaps = 6/126 (4%)
Frame = -1
Query: 1440 PXPPPXXKKKXXKX-GXGGXKKKXPPGGXXXGPPXPXSPPNKXFFXLXXSRXQKKXPPGX 1264
P PPP + + G + PP G PP P P SR P G
Sbjct: 137 PPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGT 196
Query: 1263 XGGGPXXXXPPRXXXNFFXXXKK-----KXXFXRXGPPCXXXKKXXGGGGXXXPPPXXXP 1099
P P+ ++ K PP + G G PP
Sbjct: 197 GTPPPPPTGEPQDLSAEGYASRRPPPPPKGTGSPTPPPTGEPQDLSGEGNASRRPPPPPK 256
Query: 1098 QXGGPP 1081
G PP
Sbjct: 257 GTGSPP 262
Score = 29.5 bits (63), Expect = 6.3
Identities = 26/126 (20%), Positives = 35/126 (27%), Gaps = 8/126 (6%)
Frame = -1
Query: 1434 PPPXXKKKXXKXGXGGXKKKXPPGGXXXGPPXPXSPPNKXFFXLXXSRXQKKXPPGXXGG 1255
PPP + G G ++ PP G P P ++ PP G
Sbjct: 44 PPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGT 103
Query: 1254 G---PXXXXPPRXXXNFFXXXKK-----KXXFXRXGPPCXXXKKXXGGGGXXXPPPXXXP 1099
G P P+ ++ K PP + G G PP
Sbjct: 104 GTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPK 163
Query: 1098 QXGGPP 1081
G PP
Sbjct: 164 GTGSPP 169
Score = 29.5 bits (63), Expect = 6.3
Identities = 27/127 (21%), Positives = 35/127 (27%), Gaps = 7/127 (5%)
Frame = -1
Query: 1440 PXPPPXXKKKXXKXGXGGXKKK--XPPGGXXXGPPXPXSPPNKXFFXLXXSRXQKKXPPG 1267
P PPP + + G ++ PP G PP P P SR P G
Sbjct: 74 PPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKG 133
Query: 1266 XXGGGPXXXXPPRXXXNFFXXXKK-----KXXFXRXGPPCXXXKKXXGGGGXXXPPPXXX 1102
P P+ ++ K PP + G PP
Sbjct: 134 TGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPP 193
Query: 1101 PQXGGPP 1081
G PP
Sbjct: 194 KGTGTPP 200
Score = 29.1 bits (62), Expect = 8.3
Identities = 18/72 (25%), Positives = 22/72 (30%), Gaps = 1/72 (1%)
Frame = -1
Query: 1440 PXPPPXXKKKXXKX-GXGGXKKKXPPGGXXXGPPXPXSPPNKXFFXLXXSRXQKKXPPGX 1264
P PPP + + G + PP G PP P P SR P G
Sbjct: 230 PTPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGT 289
Query: 1263 XGGGPXXXXPPR 1228
P P +
Sbjct: 290 GTPPPPTGEPEK 301
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = +2
Query: 1250 GPPPXXPGGXFFWXRLFXXXKXXLXGGXXGXGGPXXXPPGGXFFFXPP 1393
GPPP PGG + F + GG G GGP PP G F P
Sbjct: 100 GPPPGMPGGVPPQAQPFNPHGGSMFGGPGGPGGP---PPFGQPFQQAP 144
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = +2
Query: 1250 GPPPXXPGGXFFWXRLFXXXKXXLXGGXXGXGGPXXXPPGGXFFFXPP 1393
GPPP PGG + F + GG G GGP PP G F P
Sbjct: 380 GPPPGMPGGVPPQAQPFNPHGGSMFGGPGGPGGP---PPFGQPFQQAP 424
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.5 bits (68), Expect = 1.6
Identities = 31/120 (25%), Positives = 35/120 (29%)
Frame = -1
Query: 1434 PPPXXKKKXXKXGXGGXKKKXPPGGXXXGPPXPXSPPNKXFFXLXXSRXQKKXPPGXXGG 1255
PPP GG PP PP F + + P G G
Sbjct: 351 PPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPG-AFAPPPSAFGAPQGPGGPGGY 409
Query: 1254 GPXXXXPPRXXXNFFXXXKKKXXFXRXGPPCXXXKKXXGGGGXXXPPPXXXPQXGGPPRG 1075
GP P ++ F GPP GG G PPP P G PP G
Sbjct: 410 GPPPPGGPGAPGSYGPPQGGPGGF---GPP------PPGGPGAYGPPPTGFPPVGAPPPG 460
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 30.7 bits (66), Expect = 2.7
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -1
Query: 1434 PPPXXKKKXXKXGXGGXKKKXPPGGXXXGPPXPXSPPNK 1318
PPP + G G P G GPP P PP++
Sbjct: 60 PPPAPRPSGQPPGPQGPSDLPGPSGAPPGPPHPSGPPHR 98
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.9 bits (64), Expect = 4.8
Identities = 21/70 (30%), Positives = 27/70 (38%)
Frame = -1
Query: 1440 PXPPPXXKKKXXKXGXGGXKKKXPPGGXXXGPPXPXSPPNKXFFXLXXSRXQKKXPPGXX 1261
P PPP +++ PPGG GPP P P + ++ Q PPG
Sbjct: 650 PYPPPQQQQQHQAQQAQSQAHYGPPGGG-QGPPPP--PQGQQYYGGPPPPGQPYGPPG-- 704
Query: 1260 GGGPXXXXPP 1231
G P PP
Sbjct: 705 GYPPQQQRPP 714
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like protein
protein.
Length = 789
Score = 29.9 bits (64), Expect = 4.8
Identities = 21/70 (30%), Positives = 27/70 (38%)
Frame = -1
Query: 1440 PXPPPXXKKKXXKXGXGGXKKKXPPGGXXXGPPXPXSPPNKXFFXLXXSRXQKKXPPGXX 1261
P PPP +++ PPGG GPP P P + ++ Q PPG
Sbjct: 650 PYPPPQQQQQHQAQQAQSQAHYGPPGGG-QGPPPP--PQGQQYYGGPPPPGQPYGPPG-- 704
Query: 1260 GGGPXXXXPP 1231
G P PP
Sbjct: 705 GYPPQQQRPP 714
>U11279-3|AAF99909.1| 423|Caenorhabditis elegans T box family protein
2 protein.
Length = 423
Score = 29.5 bits (63), Expect = 6.3
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 1096 LGXXXGGGXXXPPPPPLFFXXXTGGXPP 1179
+G GG PPP LFF G PP
Sbjct: 18 MGAGVGGPGAGGPPPNLFFSMLQAGFPP 45
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 8.3
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +2
Query: 776 PXPPXPKIPRXFFLDITPRGDKPPFXGGNPSXGAXXGGLXG 898
P PP P +P+ P PP GG P GGL G
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGGLMG 601
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,646,645
Number of Sequences: 27780
Number of extensions: 671944
Number of successful extensions: 2058
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1869
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4214704590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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