Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_A10_e553_02.seq
(1501 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.) 164 1e-40
SB_14302| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08
SB_22884| Best HMM Match : Tctex-1 (HMM E-Value=9.4e-26) 48 3e-05
SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14) 46 6e-05
SB_1925| Best HMM Match : Tctex-1 (HMM E-Value=8.7e-12) 45 1e-04
SB_15062| Best HMM Match : Tctex-1 (HMM E-Value=9.8e-19) 44 3e-04
SB_58523| Best HMM Match : Tctex-1 (HMM E-Value=1.8e-11) 43 6e-04
SB_36748| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 0.001
SB_59030| Best HMM Match : Tctex-1 (HMM E-Value=8.2e-12) 42 0.002
SB_14303| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 0.002
SB_4931| Best HMM Match : Tctex-1 (HMM E-Value=1.7e-09) 41 0.003
SB_44342| Best HMM Match : Tctex-1 (HMM E-Value=1.7e-05) 40 0.005
SB_44340| Best HMM Match : Tctex-1 (HMM E-Value=5.6e-05) 38 0.027
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.027
SB_56295| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.15
SB_21896| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.19
SB_12931| Best HMM Match : Tctex-1 (HMM E-Value=0.00045) 33 0.45
SB_25366| Best HMM Match : Tctex-1 (HMM E-Value=2.6e-08) 33 0.78
SB_43919| Best HMM Match : Ribosomal_S30 (HMM E-Value=5) 29 7.3
>SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 794
Score = 164 bits (399), Expect = 1e-40
Identities = 71/96 (73%), Positives = 82/96 (85%)
Frame = +2
Query: 212 AEENQFIVDDVSKIIKEAIENSIGGTAYQHNKVNQWTSAVVESCLGQLTKLQKPYKYIVT 391
AEE F+VD+VS IIKE IE +IGG AYQHNKVNQWTS VVE CL QLTKL KP+KYIVT
Sbjct: 7 AEETSFVVDEVSNIIKEGIEGAIGGNAYQHNKVNQWTSNVVEQCLNQLTKLGKPFKYIVT 66
Query: 392 CTIMQKNGAGLHTASSCFWDNNTDGSCTVRWENKTM 499
C IMQKNGAGLHT+SSC+WDN TDGSCT++ +K++
Sbjct: 67 CVIMQKNGAGLHTSSSCYWDNTTDGSCTIKQPDKSL 102
>SB_14302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 58.4 bits (135), Expect = 1e-08
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Frame = +2
Query: 230 IVDDVSKIIKEAIENSIGGTAYQHNKVNQWTSAVVESCLGQLTKLQ-KPYKYIVTCTIMQ 406
I++++SK+I ++ + G +Y+ + ++ + E+ ++ L YK +V +I
Sbjct: 26 IIENISKVI---LQERLEGMSYEATECSKLAREMSETIRNEVKALSWDRYKIVVMVSIGS 82
Query: 407 KNGAGLHTASSCFWDNNTDGSCTVRWENKTMYCIVSVFGL 526
GLH +S C W NTDGS T + N +++ + +VFG+
Sbjct: 83 LKDQGLHISSRCLWYPNTDGSATAVYRNTSLFAVATVFGI 122
>SB_22884| Best HMM Match : Tctex-1 (HMM E-Value=9.4e-26)
Length = 439
Score = 47.6 bits (108), Expect = 3e-05
Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Frame = +2
Query: 224 QFIVDDVSKIIKEAIENSIGGTAYQHNKVNQWTSAVVESCLGQLTKLQ-KPYKYIVTCTI 400
+F ++ I+KE + ++ Y N Q T + E+ ++ +L + YK I I
Sbjct: 73 KFPEGNIRNIMKEVLIENLADVNYDPNTCRQLTKTISETLKNRVKELSVQRYKIICLVHI 132
Query: 401 MQKNGAGLHTASSCFWDNNTDGSCTVRWENKTMYCIVSVFGL 526
Q + S C WD N D T ++N +++ + +V+G+
Sbjct: 133 GQLGKQAMRIGSRCLWDANFDTYTTYEFKNGSLFGVATVYGV 174
>SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14)
Length = 273
Score = 46.4 bits (105), Expect = 6e-05
Identities = 23/116 (19%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Frame = +2
Query: 182 VMEVKECNDLAEENQFIVDDVSKIIKEAIENSIGGTAYQHNKVNQWTSAVVESCLGQLTK 361
+ +++ + + F +V +II ++N++ + Y+ + + + + L Q+
Sbjct: 155 IQKLENTYQVEPKRVFPTGEVKQIIHNTLQNALAESKYKEMNSSFVSQLLSQRVLDQVKS 214
Query: 362 LQ-KPYKYIVTCTIMQKNGAGLHTASSCFWDNNTDGSCTVRWENKTMYCIVSVFGL 526
L + YK + +I K+ G+ AS C W + D + EN +++ + +V+G+
Sbjct: 215 LDVQRYKLVCLVSIGSKSDQGMRVASRCLWHSEFDRFASASVENGSLFAVGTVYGV 270
>SB_1925| Best HMM Match : Tctex-1 (HMM E-Value=8.7e-12)
Length = 349
Score = 45.2 bits (102), Expect = 1e-04
Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Frame = +2
Query: 224 QFIVDDVSKIIKEAIENSIGGTAYQHNKVNQWTSAVVESCLGQLTKLQKP-YKYIVTCTI 400
QF V +V +I++E E I Y K + + ++ LQ P YK I +
Sbjct: 173 QFEVTEVQRIMREVFEEEIKDLEYDAEKCAPLCKRLSDVVKARVKGLQYPRYKIIALVYV 232
Query: 401 MQKNGAGLHTASSCFWDNNTDGSCTVRWEN-KTMYCIVSVFGL 526
QK G + S C WD D +E Y + V+G+
Sbjct: 233 GQKEGQDVRITSRCVWDTRFDNCAQYAYEGLHDTYAVGMVYGI 275
>SB_15062| Best HMM Match : Tctex-1 (HMM E-Value=9.8e-19)
Length = 851
Score = 44.0 bits (99), Expect = 3e-04
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +2
Query: 242 VSKIIKEAIENSIGGTAYQHNKVNQWTSAVVESCLGQLTKLQ-KPYKYIVTCTIMQKNGA 418
V +I+K+A+ ++ +Y+ N + + L ++ +L + YK + +I KN
Sbjct: 754 VRQIVKDALV-TLDSHSYEPNDSALLAKLMSKRILDEVKQLNVERYKLVCLVSIGSKNRQ 812
Query: 419 GLHTASSCFWDNNTDGSCTVRWENKTMYCIVSVFGL 526
G+ AS C W+ D + + T Y I +V+GL
Sbjct: 813 GMRIASRCLWNTEYDTCISETMDKHTFYAIATVYGL 848
>SB_58523| Best HMM Match : Tctex-1 (HMM E-Value=1.8e-11)
Length = 541
Score = 43.2 bits (97), Expect = 6e-04
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = +2
Query: 227 FIVDDVSKIIKEAIENSIGGTAYQHNKVNQWTSAVVESCLGQLTKLQKP-YKYIVTCTIM 403
F V V +II+ + ++ Y K + ++ S ++ L+ P YK +V +
Sbjct: 438 FPVAKVEEIIRGVLSETLSSVEYNVTKAKEKCKSISNSIKERVKALELPRYKLVVLAHVG 497
Query: 404 QKNGAGLHTASSCFWDNNTDGSCTVRWENKTMYCIVSVFGL 526
G + S C W + D T + N +++ +V+G+
Sbjct: 498 GNQGQEIKVTSRCVWSHEFDNYATASYCNSSVFAQATVYGI 538
>SB_36748| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 329
Score = 41.9 bits (94), Expect = 0.001
Identities = 23/107 (21%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Frame = +2
Query: 209 LAEENQFIVDDVSKIIKEAIENSIGGTAYQHNKVNQWTSAVVESCLGQLTKLQKP-YKYI 385
+ + + D + +I++ + + T Y+ N+ + + + L L L P YK++
Sbjct: 221 MVPDKKIACDKIRDVIRKHLR-FLETTEYEVNRCREISKLLSNRILKDLKLLGFPRYKFV 279
Query: 386 VTCTIMQKNGAGLHTASSCFWDNNTDGSCTVRWENKTMYCIVSVFGL 526
+ I Q G + AS C WD +D + +E+ +++ + +VF +
Sbjct: 280 SSVCIGQMLGQSVRIASRCVWDTESDNFVSESYESLSLFAVGTVFAV 326
>SB_59030| Best HMM Match : Tctex-1 (HMM E-Value=8.2e-12)
Length = 178
Score = 41.5 bits (93), Expect = 0.002
Identities = 23/108 (21%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Frame = +2
Query: 209 LAEENQFIVDDVSKIIKEAIENSIGGTAYQHNKVNQWTSAVVESCLGQLTKL--QKPYKY 382
L +++ F D+ ++ E +++++ Y + +S ++ L K Y++
Sbjct: 68 LKDKDFFCSHDIQCLMDEILDDTLSSEHYSAESSRVLCLGLADSIKSRVKGLGMAKRYRF 127
Query: 383 IVTCTIMQKNGAGLHTASSCFWDNNTDGSCTVRWENKTMYCIVSVFGL 526
I +I +G GL AS W+ D T + N +++ + +VFG+
Sbjct: 128 ICHVSIGSCSGQGLLIASKSVWNEKRDSFVTSTFRNASLFAVATVFGV 175
>SB_14303| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 41.5 bits (93), Expect = 0.002
Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Frame = +2
Query: 236 DDVSKIIKEAIENSIGG-TAYQHNKVNQWT---SAVVESCLGQLTKLQKPYKYIVTCTIM 403
+++ ++I++ + + + T Y+H + S ++++C+ +L +P K IV I
Sbjct: 72 EEMGRVIRDVLSSYLKQFTEYKHEMFERLCTLLSDLIKTCVTELC--DEPCKVIVNVFIG 129
Query: 404 QKNGAGLHTASSCFWDNNTDGSCTVRWENKTMYCIVSVF 520
G G+ A+ C W + D T ++N+T++ + VF
Sbjct: 130 AIKGQGIDAATQCTWTPDCDKFATASFQNETLFAVGVVF 168
>SB_4931| Best HMM Match : Tctex-1 (HMM E-Value=1.7e-09)
Length = 259
Score = 40.7 bits (91), Expect = 0.003
Identities = 24/120 (20%), Positives = 51/120 (42%), Gaps = 1/120 (0%)
Frame = +2
Query: 170 RCV*VMEVKECNDLAEENQFIVDDVSKIIKEAIENSIGGTAYQHNKVNQWTSAVVESCLG 349
R + +++ K+C E + + + +IK+ +E + Y+ N +
Sbjct: 139 RALCLVQAKKCARCILEVE--PERIEPLIKDTLEEHLDNQTYEPNFCRLAAIKITNQLKE 196
Query: 350 QLTKLQKP-YKYIVTCTIMQKNGAGLHTASSCFWDNNTDGSCTVRWENKTMYCIVSVFGL 526
++ +L+ P YKY+ + + N + S C WD D + N ++Y I V+ +
Sbjct: 197 RMKRLRYPRYKYVCHAMLGEINNQDVRAVSRCAWDTCVDSFAQYEYRNCSLYGIGLVYAI 256
>SB_44342| Best HMM Match : Tctex-1 (HMM E-Value=1.7e-05)
Length = 608
Score = 39.9 bits (89), Expect = 0.005
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 6/109 (5%)
Frame = +2
Query: 224 QFIVDDVSKIIKEAIENSIGGTAYQHNKVNQWTSAVVESCLGQLTKLQKP-YKYIVTCTI 400
+F D V+KII + +N + Y + + +L P Y+ + TCTI
Sbjct: 477 KFDRDKVTKIIVDVFKNKLANMHYNAKDCQAMAKELASVIREKCVELHLPGYRLVCTCTI 536
Query: 401 MQKNGAGLHTASSCFWDN-----NTDGSCTVRWENKTMYCIVSVFGLGI 532
++ S C WD + D ++N +Y I +V+G+ I
Sbjct: 537 TKRLKPAPAIESGCLWDEKRSSIDNDSFAEYVYKNMDIYAIGTVYGVHI 585
>SB_44340| Best HMM Match : Tctex-1 (HMM E-Value=5.6e-05)
Length = 369
Score = 37.5 bits (83), Expect = 0.027
Identities = 23/106 (21%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = +2
Query: 188 EVKECNDLAEENQFIVDDVSKIIKEAIENSIGGTAYQHNKVNQWTSAVVESCLGQLTKLQ 367
++ + ND E+N + + +II E +++ + Y + + S + + G++
Sbjct: 75 DIADLNDF-EDNFESQELLRQIISEELDSVLRDCDYDSERSVKQGSVISQRVEGRVKSAV 133
Query: 368 KPYKYIVTCT-IMQKNGAGLHTASSCFWDNNTDGSCTVRWENKTMY 502
K IV+ I + G+ S C WD+ +D T + NK+++
Sbjct: 134 KSGTKIVSVVYIGEIRDQGIEITSQCLWDSKSDNFATASFRNKSLF 179
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 37.5 bits (83), Expect = 0.027
Identities = 15/68 (22%), Positives = 32/68 (47%)
Frame = +2
Query: 374 YKYIVTCTIMQKNGAGLHTASSCFWDNNTDGSCTVRWENKTMYCIVSVFGLGI*HILSLN 553
YK + I + N + S C WD N D + N T++ + +++G+ ++ L
Sbjct: 19 YKIVCLTNIGKVNDQTIRIGSRCCWDQNLDNYAEAVYTNSTLFAVTAIYGIYQENVYQLK 78
Query: 554 FIIKSKTF 577
+++ T+
Sbjct: 79 KRVQNLTY 86
>SB_56295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 35.1 bits (77), Expect = 0.15
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +3
Query: 360 NYRNLTNI**HAQ*CKKMVLGFIRRLHVFGTITLTALALFVGKIKPCTALSLSSALAYNI 539
++ N N+ +A CK M + F + HVFG +T+ L V K ++LS L +N
Sbjct: 42 DWSNQQNMELNADKCKVMTIDFKKNKHVFGPVTVNGKELPVVKSAKNLGMTLSDDLTWNN 101
Query: 540 YCL*ILS*NQKHLLIIV 590
+ + K L +V
Sbjct: 102 HVTECIKKANKRLFFLV 118
>SB_21896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 759
Score = 34.7 bits (76), Expect = 0.19
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +3
Query: 360 NYRNLTNI**HAQ*CKKMVLGFIRRLHVFGTITLTALALFVGKIKPCTALSLSSALAYN 536
++ N N+ +A CK M + F + HVFG +T+ L V K ++LS L +N
Sbjct: 696 DWSNQQNMELNADKCKVMTIDFKKNKHVFGPVTVNGKELPVVKSAKILGMTLSDDLTWN 754
>SB_12931| Best HMM Match : Tctex-1 (HMM E-Value=0.00045)
Length = 247
Score = 33.5 bits (73), Expect = 0.45
Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 6/114 (5%)
Frame = +2
Query: 203 NDLAEENQFIVDDVSKIIKEAIENSIGGTAYQHNKVNQWTSAVVESCLGQLTKLQKP-YK 379
N E F + +I+KE ++ G Y+ + + + +L L P +K
Sbjct: 75 NKATEITGFDKKVIFEILKEVLDQGFEGLTYEQRDTARLCHEIARTLKERLALLHIPEFK 134
Query: 380 YIVTCTIMQKNGAGLHTASSCFWDN-----NTDGSCTVRWENKTMYCIVSVFGL 526
+ TC ++ + S C WD + DG ++N+ + + +V+ L
Sbjct: 135 LVCTCYATRRAKPCMQIESGCAWDELHCSIDKDGFVEYVFQNEELAVVGTVYDL 188
>SB_25366| Best HMM Match : Tctex-1 (HMM E-Value=2.6e-08)
Length = 556
Score = 32.7 bits (71), Expect = 0.78
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Frame = +2
Query: 221 NQFIVDDVSKIIKEAIENSIGGTAYQHNKVNQWTSAVVESCLGQLTKLQ-KPYKYIVTCT 397
N+F V II+EA + + +Y+ T+ + E ++ L YK I
Sbjct: 385 NRFSHKKVKDIIEEAFQEHLNEHSYEAEFCKHMTTKLSELIKQRVKHLGFTRYKLICIVY 444
Query: 398 IMQKNGAGLHTASSCFWDNNTD 463
I Q G+ S C W+ N D
Sbjct: 445 IGQVMNQGMRIGSRCLWNTNFD 466
>SB_43919| Best HMM Match : Ribosomal_S30 (HMM E-Value=5)
Length = 217
Score = 29.5 bits (63), Expect = 7.3
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +2
Query: 146 LEITWD*NRCV*VMEVKECNDLAEENQFIVDDVSKIIKEAIENSIGGTAYQHNKVNQWTS 325
+EITWD N V +E +D++ E ++D V K+ + S TA Q Q
Sbjct: 149 IEITWDHNHLVDTLEASNFHDVSPE---VIDKVMKLFESGCTPS---TARQ-----QCLK 197
Query: 326 AVVESCLGQL 355
+ ESC G+L
Sbjct: 198 DLRESCKGEL 207
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,397,779
Number of Sequences: 59808
Number of extensions: 638515
Number of successful extensions: 1279
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1277
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 4859439678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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