Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030725E6_A08_e537_02.seq
(1482 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0199 + 21526872-21527250,21527431-21527594,21527673-215277... 367 e-101
02_05_0583 + 30128795-30129158,30129342-30129505,30129602-301296... 363 e-100
09_04_0515 + 18238434-18238545,18238659-18238709,18238844-182388... 99 4e-21
09_04_0480 + 17958726-17958926,17959294-17959382,17960176-179602... 75 1e-13
08_02_0423 - 16946435-16946542,16946924-16947045,16947442-169475... 62 1e-09
08_02_0422 - 16941628-16941696,16942063-16942144,16942729-169428... 50 6e-06
02_02_0076 + 6581428-6581695,6582247-6582305,6582481-6582531,658... 46 8e-05
02_02_0666 - 12757555-12757688,12757968-12758029,12758156-127582... 44 2e-04
08_02_1046 - 23919990-23920183,23920251-23920479,23920624-239210... 34 0.25
09_02_0363 - 7871730-7871853,7871986-7872075,7872720-7872799,787... 30 5.4
03_05_0327 - 23154014-23154942,23155169-23155316,23155606-231566... 29 9.4
02_05_0997 + 33382756-33382861,33383070-33383161,33383936-333841... 29 9.4
>09_06_0199 + 21526872-21527250,21527431-21527594,21527673-21527736,
21528001-21528134,21528302-21528385,21528526-21528600,
21528683-21528754,21528852-21528925,21529185-21529282,
21529355-21529464,21529794-21529862,21529944-21530018,
21530519-21530611,21530690-21530769,21530877-21530976,
21531150-21531586,21531676-21531706,21532873-21533822,
21533982-21534201
Length = 1102
Score = 367 bits (903), Expect = e-101
Identities = 173/275 (62%), Positives = 211/275 (76%), Gaps = 17/275 (6%)
Frame = +3
Query: 81 LDPVGKWSKVGLVVYSSTVPIGATPEYLAGHYILQGASSFLPVMALAPQENERILDMCAA 260
LDP+GKWSKVGLVVY ST+ GAT EY+AGHY+ QGASSFLPVMALAPQE ERI+DM AA
Sbjct: 292 LDPIGKWSKVGLVVYDSTISAGATVEYMAGHYMKQGASSFLPVMALAPQEKERIVDMAAA 351
Query: 261 PGGKASHIAAIMKNTGA---------------LFANDANKERTKAIVGNFHRLGVVNTVI 395
PGGK ++I A+MKNTG ++AN+ N++R ++GN HR+GV NT++
Sbjct: 352 PGGKTTYIGALMKNTGQCALPVFSTFCSYRRIIYANEFNEKRLHGLLGNIHRMGVTNTIV 411
Query: 396 CNYDGRQFPDVI--KGFDRVLLDAPCTGTGVIAKDPSVKTTKDQKDIQRCFNLQRQLLLA 569
CNYDG++ P V+ DRVLLDAPCTGTG I KDP +KT+K +DI+ C +Q+QLLLA
Sbjct: 412 CNYDGKELPKVLGMNSVDRVLLDAPCTGTGTIWKDPQIKTSKGIEDIRDCAFVQKQLLLA 471
Query: 570 AIDCCNAKSSTGSYIVYSTCSILPEENEWVVNYALKRRNVKLVPTGLDFGTEGFVKYRHH 749
AID +A S TG YIVYSTCS++ ENE V++YALK+RNVKLVP GLDFG GF+++R H
Sbjct: 472 AIDLVDANSKTGGYIVYSTCSLMIPENEAVIDYALKKRNVKLVPCGLDFGRPGFIRFREH 531
Query: 750 RFHPSLKLTRRFYPHTHNMDGFFVAKLRKFSNVIP 854
RFH SL TRRFYPH +NMDGFFVAKL+K SN IP
Sbjct: 532 RFHTSLDKTRRFYPHVNNMDGFFVAKLKKLSNTIP 566
>02_05_0583 + 30128795-30129158,30129342-30129505,30129602-30129665,
30130082-30130215,30130369-30130452,30130580-30130654,
30130734-30130805,30130892-30130965,30131217-30131269,
30131388-30131497,30131824-30131892,30131975-30132049,
30132449-30132508,30132555-30132647,30132718-30132797,
30132877-30132976,30133153-30133590
Length = 702
Score = 363 bits (894), Expect = e-100
Identities = 174/280 (62%), Positives = 210/280 (75%), Gaps = 22/280 (7%)
Frame = +3
Query: 81 LDPVGKWSKVGLVVYSSTVPIGATPEYLAGHYILQGASSFLPVMALAPQENERILDMCAA 260
LDP+GKWSKVGLVVY ST+ GAT EY+AGHY+ QGASSFLPVMALAPQE ERI+DM AA
Sbjct: 287 LDPIGKWSKVGLVVYDSTISAGATVEYMAGHYMKQGASSFLPVMALAPQEKERIVDMAAA 346
Query: 261 PGGKASHIAAIMKNTGALFANDANKERTKAIVGNFHRLGVVNTVICNYDGRQFPDVI--K 434
PGGK ++I A+MKNTG ++AN+ N++R ++GN HR+GV NT++CNYDG++ P V+
Sbjct: 347 PGGKTTYIGALMKNTGIIYANEFNEKRLHGLLGNIHRMGVTNTIVCNYDGKELPKVLGMN 406
Query: 435 GFDRVLLDAPCTGTGVIAKDPSVKTTKDQKDIQRC--------------------FNLQR 554
DRVLLDAPCTGTG I KDP +KT+K +DI+ C L+
Sbjct: 407 SVDRVLLDAPCTGTGTIWKDPQIKTSKGIEDIRDCAFVQKFFLNRAVILYWLSTSITLKL 466
Query: 555 QLLLAAIDCCNAKSSTGSYIVYSTCSILPEENEWVVNYALKRRNVKLVPTGLDFGTEGFV 734
QLLLAAID +A S TG YIVYSTCS++ ENE VV+YALK+RNVKLVP GLDFG GF+
Sbjct: 467 QLLLAAIDLVDANSKTGGYIVYSTCSLMIPENEAVVDYALKKRNVKLVPCGLDFGRPGFI 526
Query: 735 KYRHHRFHPSLKLTRRFYPHTHNMDGFFVAKLRKFSNVIP 854
++R HRFH SL TRRFYPH +NMDGFFVAKL+K SN IP
Sbjct: 527 RFREHRFHTSLDKTRRFYPHVNNMDGFFVAKLKKLSNTIP 566
>09_04_0515 + 18238434-18238545,18238659-18238709,18238844-18238897,
18239727-18239777,18239845-18239895,18240056-18240210,
18240550-18240663,18240873-18240938,18241478-18241561,
18241640-18241726,18241975-18242066,18242163-18242223,
18242475-18242531,18243129-18243220,18243394-18243584,
18244203-18244321,18244518-18244589,18244699-18244784,
18244866-18244962,18245488-18245622
Length = 608
Score = 99 bits (238), Expect = 4e-21
Identities = 74/217 (34%), Positives = 110/217 (50%), Gaps = 7/217 (3%)
Frame = +3
Query: 201 LPVMALAPQENERILDMCAAPGGKASHIAAIMKNTGALFANDANKERTKAIV--GNFHRL 374
L V + PQ E I+D CAAPGGK +AA + G ++A D NK R + ++ H L
Sbjct: 405 LVVSVVDPQPGETIIDCCAAPGGKTLFMAARLSGQGKIWALDINKGRLRILMEAAKLHNL 464
Query: 375 GVVNTVICNYDGRQF-PDVIKGFDRVLLDAPCTGTGVIAKDPSVKTTKDQKDIQRCFNLQ 551
+ + I + D R + + FD+VLLDAPC+G GV++K ++ + +D++ LQ
Sbjct: 465 DAMISDI-HADLRLYAKETTATFDKVLLDAPCSGLGVLSKRADLRWNRQFEDLEELMCLQ 523
Query: 552 RQLLLAAIDCCNAKSSTGSYIVYSTCSILPEENEWVVNYALKRRNVKLVPTGLDFGTEGF 731
+LL D + G +VYSTCSI PEENE + ++R F
Sbjct: 524 DELL----DSASMLVKPGGILVYSTCSIDPEENEHRIAAFVQRH-------------PDF 566
Query: 732 VKYRHHRFHPSLKLT-RRFY---PHTHNMDGFFVAKL 830
V H + P+ +T FY P H++DG F A+L
Sbjct: 567 VLQSVHGYVPAEFVTDEGFYSSSPTKHSIDGAFAARL 603
>09_04_0480 +
17958726-17958926,17959294-17959382,17960176-17960242,
17960329-17960444,17960978-17961044,17961158-17961206,
17961630-17961715,17961825-17962078,17962158-17962213,
17962683-17962768,17963047-17963139,17963790-17964219,
17964338-17964861,17964962-17965190,17965271-17965566
Length = 880
Score = 75.4 bits (177), Expect = 1e-13
Identities = 59/196 (30%), Positives = 87/196 (44%), Gaps = 25/196 (12%)
Frame = +3
Query: 168 GHYILQGASSFLPVMALAPQENERILDMCAAPGGKASHIAAIMKNT--------GALFAN 323
G+ Q A S +P + L Q + ILDMCAAPG K + ++ + + AN
Sbjct: 170 GNITRQEAVSMVPPLFLNVQPDHHILDMCAAPGSKTFQLLEMIHQSTKPGMLPNALVVAN 229
Query: 324 DANKERTKAIVGNFHRLGVVNTVICNYDGRQFP-------------DVIK----GFDRVL 452
D + +R ++ R+ N ++ N++ + FP D K FDRVL
Sbjct: 230 DVDVQRCNLLIHQTKRMCTANLIVTNHEAQNFPGCNLAKFSSETCTDESKLQRLEFDRVL 289
Query: 453 LDAPCTGTGVIAKDPSVKTTKDQKDIQRCFNLQRQLLLAAIDCCNAKSSTGSYIVYSTCS 632
D PC+G G + K P + + LQ ++ + I G IVYSTCS
Sbjct: 290 CDVPCSGDGTVRKAPDMWRKWNAGMGNGLHRLQVEIAMRGIGLL----KVGGRIVYSTCS 345
Query: 633 ILPEENEWVVNYALKR 680
+ P ENE VV L+R
Sbjct: 346 MNPVENEAVVAEILRR 361
>08_02_0423 -
16946435-16946542,16946924-16947045,16947442-16947504,
16949707-16949844,16950062-16950170,16950610-16950934,
16952482-16952645
Length = 342
Score = 61.7 bits (143), Expect = 1e-09
Identities = 30/66 (45%), Positives = 39/66 (59%)
Frame = +3
Query: 156 EYLAGHYILQGASSFLPVMALAPQENERILDMCAAPGGKASHIAAIMKNTGALFANDANK 335
+ L G LQ S + L PQ ERILDMCAAPGGK + IA +MK+ G + A D +
Sbjct: 246 DVLEGEIFLQNLPSVVAARVLDPQPGERILDMCAAPGGKTTAIAILMKDQGEIIALDRSH 305
Query: 336 ERTKAI 353
+ K+I
Sbjct: 306 NKLKSI 311
>08_02_0422 -
16941628-16941696,16942063-16942144,16942729-16942829,
16944422-16944630,16944933-16945140
Length = 222
Score = 49.6 bits (113), Expect = 6e-06
Identities = 31/81 (38%), Positives = 46/81 (56%)
Frame = +3
Query: 438 FDRVLLDAPCTGTGVIAKDPSVKTTKDQKDIQRCFNLQRQLLLAAIDCCNAKSSTGSYIV 617
FDRVLLDAPC+ G+ + + + T + ++ QR++ A+ + G IV
Sbjct: 117 FDRVLLDAPCSALGLRPRLFAGEETLES--LRNHATYQRRMFDQAVKLVHP----GGVIV 170
Query: 618 YSTCSILPEENEWVVNYALKR 680
YSTC+I P ENE +V YAL +
Sbjct: 171 YSTCTINPGENEALVRYALDK 191
>02_02_0076 +
6581428-6581695,6582247-6582305,6582481-6582531,
6582766-6582898,6583533-6583618,6583955-6584008,
6584576-6584645,6585198-6585259,6585370-6585457,
6585645-6585728,6585820-6586028
Length = 387
Score = 46.0 bits (104), Expect = 8e-05
Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 6/172 (3%)
Frame = +3
Query: 177 ILQGASSFLPVMALAPQENERILDMCAAPGGKASHIAAIMKNTGALFANDANKERTKAIV 356
I +G +S + +AL P+ +++D CAAPG K H+AA+M G + + I
Sbjct: 197 IHKGKASCMVAVALCPEPGWKVIDACAAPGNKTVHLAALMNGEGNI----------ETIN 246
Query: 357 GNFHRLGVVNTVICNYDGRQFPDVIKGFDRVLLDAPCTGTGVIAKD-----PSVKTTKDQ 521
G+F + + + + +V +LLD C+G+G+ + PS + +Q
Sbjct: 247 GDF--------LDIDSNDPSYAEV----RAILLDPSCSGSGISTERLDHLLPS-HSRGNQ 293
Query: 522 KDIQRCFNLQRQLLLAAIDCCNAKS-STGSYIVYSTCSILPEENEWVVNYAL 674
D +++ +A S + +VYSTCSI ENE VV+ L
Sbjct: 294 DDASTSSRIRKLSAFQRKALSHALSFPSVERVVYSTCSIHQAENEDVVSSVL 345
>02_02_0666 -
12757555-12757688,12757968-12758029,12758156-12758223,
12758359-12758490,12759116-12759351,12759451-12759648,
12760123-12760213,12760566-12760710,12760837-12760955
Length = 394
Score = 44.4 bits (100), Expect = 2e-04
Identities = 26/72 (36%), Positives = 36/72 (50%)
Frame = +3
Query: 135 VPIGATPEYLAGHYILQGASSFLPVMALAPQENERILDMCAAPGGKASHIAAIMKNTGAL 314
V I ++ Y G A+S V+AL Q E +LD+CAAPG K +A ++ G+L
Sbjct: 76 VQIASSMAYQQGKIYGIDAASGAAVLALDVQPGEHVLDLCAAPGAKLCMLADMLGGRGSL 135
Query: 315 FANDANKERTKA 350
D K R A
Sbjct: 136 TGVDVAKHRLAA 147
Score = 39.5 bits (88), Expect = 0.007
Identities = 44/141 (31%), Positives = 62/141 (43%), Gaps = 7/141 (4%)
Frame = +3
Query: 435 GFDRVLLDAPCTGTGVIAKDPSVK----TTKDQK--DIQRCFNLQRQLLLAAIDCCNAKS 596
G+D+VL+DA CT G I + T D++ D +R +L L L +
Sbjct: 260 GYDKVLVDAECTHDGSIKHIQKFEFWGWKTLDRRVLDAERTDDLLH-LQLRLLTNGFKLL 318
Query: 597 STGSYIVYSTCSILPEENEWVV-NYALKRRNVKLVPTGLDFGTEGFVKYRHHRFHPSLKL 773
TG +VYSTCS+ +NE VV + K + +L +D + S+
Sbjct: 319 KTGGSLVYSTCSLTVAQNENVVQQFLCKHSSAEL--QKIDSADSWPCR------SGSIFK 370
Query: 774 TRRFYPHTHNMDGFFVAKLRK 836
T RF P T G FVAK K
Sbjct: 371 TLRFDPATSQTSGLFVAKFTK 391
>08_02_1046 -
23919990-23920183,23920251-23920479,23920624-23921057,
23921426-23921567,23922163-23922255,23923132-23923245,
23924181-23924266,23924458-23924506,23924717-23924783,
23925550-23925665,23925698-23925821,23926465-23926553,
23926810-23927061
Length = 662
Score = 34.3 bits (75), Expect = 0.25
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +3
Query: 168 GHYILQGASSFLPVMALAPQENERILDMCAAPGGK 272
G+ Q A S +P + L Q + +LDMCAAPG K
Sbjct: 206 GNITRQEAVSMVPPLFLNIQPDHHVLDMCAAPGSK 240
Score = 31.1 bits (67), Expect = 2.3
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 603 GSYIVYSTCSILPEENEWVVNYALKR 680
G +VYSTCS+ P ENE V+ L+R
Sbjct: 278 GGRMVYSTCSMNPVENEAVIAELLRR 303
>09_02_0363 -
7871730-7871853,7871986-7872075,7872720-7872799,
7872881-7872964,7874944-7874992,7875114-7875240,
7875798-7875934,7876004-7876050,7876126-7876185,
7876810-7876862,7878205-7878269,7879050-7879174,
7879307-7879366,7879670-7879806,7880737-7880805,
7880889-7881045,7881121-7881235,7881855-7881916
Length = 546
Score = 29.9 bits (64), Expect = 5.4
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -2
Query: 407 IIITYYRVNNT-QPVEVTHDSLCPFFICIVCKQSSRIFHNC 288
++ Y NNT Q EVT D CPF C+V S +I C
Sbjct: 248 VLFNYKYYNNTMQKTEVTEDFSCPF--CLVPCGSFKISEEC 286
>03_05_0327 -
23154014-23154942,23155169-23155316,23155606-23156622,
23156753-23157217,23160258-23161247
Length = 1182
Score = 29.1 bits (62), Expect = 9.4
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
Frame = -1
Query: 795 YEDKIFLSISMMDGICDVCISQTLQYQSLNR------LELASHSA 679
Y D F S+ + IC V I Q LQ+ SLN L LA+HSA
Sbjct: 770 YSDVAFSSLKV---ICQVYIEQCLQFDSLNATPLLAYLSLATHSA 811
>02_05_0997 +
33382756-33382861,33383070-33383161,33383936-33384175,
33384820-33384900,33384974-33385113,33385462-33385622,
33385700-33385800,33385895-33385969,33386218-33386488,
33386657-33386697,33386922-33387004,33387100-33387189,
33387721-33387825,33388023-33388161,33388467-33388670,
33388837-33388908,33389189-33389273,33389374-33389480
Length = 730
Score = 29.1 bits (62), Expect = 9.4
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = -3
Query: 532 CISF*SFVVFTLGSFAITPVPV--QGASNKTLSK--PLITSGNCLPS*LHITVLTTP 374
CI F F +F +G I VP+ Q + NKT + S CL LH VL P
Sbjct: 132 CICFSIFGIFPVGKININEVPIHFQSSGNKTSYRLQDASISKVCLSGNLHQLVLLCP 188
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,274,819
Number of Sequences: 37544
Number of extensions: 645048
Number of successful extensions: 1295
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1286
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4733660064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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